RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 FAM236BA0A1B0GV22 79 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 Q8TAT8 98 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 SAP25Q8TEE9 199 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 TRGV5A0A0B4J1U4 118 aa6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 A4D1N5 150 aa6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 M0R381 172 aa6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 NTN3O00634 580 aaPredicted RBP6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 PPP1R17O96001 155 aa6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 EMP1P54849 157 aa6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 SUMO2P61956 95 aaKnown RBP6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 TCF15Q12870 199 aa6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 ZNF474Q6S9Z5 364 aaPredicted RBP6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 KLHL30-AS1Q8NEE0 82 aa6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 CTSZQ9UBR2 303 aa6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 USP34Q70CQ2 3546 aa6.93□□□□□ -1.3
SMARCE1-207ENST00000469334 EPOPA6NHQ4 379 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 K7EIM0 57 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 PMVKQ15126 192 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 Q6ZS46 218 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 SPRR3Q9UBC9 169 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 PRUNE2Q8WUY3 3088 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 IGLV4-69A0A075B6H9 119 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 IGLV3-9A0A075B6K5 115 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 IGHV7-4-1A0A0J9YVY3 117 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 SPRY3O43610 288 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 LGALS3P17931 250 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 Q1RN00 199 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 ZNRF2Q8NHG8 242 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 CDH23Q9H251 3354 aa6.92□□□□□ -1.3
SMARCE1-207ENST00000469334 CACNA1EQ15878 2313 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 TRAV26-2A0A0B4J265 109 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 ENSAO43768 121 aaKnown RBP6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 CXCL5P42830 114 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 MSMPQ1L6U9 139 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 CFHR4Q92496 578 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 AMELXQ99217 191 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 KLK15Q9H2R5 256 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 SVILO95425 2214 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 TRGV11A0A075B6L2 103 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 IGKV3D-20A0A0C4DH25 116 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 A0A0J9YX75 114 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 LOC107984640A0A0U1RRK4 108 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 J3QQQ9 107 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 COX6CP09669 75 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 CRYGAP11844 174 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 COX7CP15954 63 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 SPANXN1Q5VSR9 72 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 C3orf56Q8N813 242 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 MDS2Q8NDY4 140 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 TMEM141Q96I45 108 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 METTL26Q96S19 204 aa6.91□□□□□ -1.3
SMARCE1-207ENST00000469334 SDHAF1A6NFY7 115 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 OOSP1A8MZH6 123 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 H7C423 109 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 EIF4EBP3O60516 100 aaPredicted RBP6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 IGHV4-39P01824 125 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 CRYGDP07320 174 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 CCL3L1P16619 93 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 C3orf36Q3SXR2 165 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 LINC00643Q86TS7 51 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 DEFB108BQ8NET1 73 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 IGFBPL1Q8WX77 278 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 RNF5Q99942 180 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 CHD9Q3L8U1 2897 aa6.9□□□□□ -1.3
SMARCE1-207ENST00000469334 PLXNB1O43157 2135 aa6.9□□□□□ -1.31
SMARCE1-207ENST00000469334 TRANK1O15050 2925 aa6.9□□□□□ -1.31
SMARCE1-207ENST00000469334 A0A0G2JNJ9 132 aa6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 C17orf100A8MU93 164 aa6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 LEPROTO15243 131 aa6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 TRIAP1O43715 76 aa6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 APELAP0DMC3 54 aa6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 TSPEAR-AS2P59090 65 aa6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 TMEM200BQ69YZ2 307 aa6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 DEFB127Q9H1M4 99 aa6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 Q9UFV3 132 aa6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 PRB4P10163 310 aaPredicted RBP6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 GAGE2AQ6NT46 116 aa6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 TIMM17AQ99595 171 aa6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 ZNF256Q9Y2P7 627 aaPredicted RBP6.89□□□□□ -1.31
SMARCE1-207ENST00000469334 ARFGEF3Q5TH69 2177 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 TRAV17A0A0B4J275 112 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 MFAP4P55083 255 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 DLX1P56177 255 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 DYNAPQ8N1N2 210 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 CNEP1R1Q8N9A8 125 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 MRAPQ8TCY5 172 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 DPH3P1Q9H4G8 78 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 SLC25A15Q9Y619 301 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 ICOSQ9Y6W8 199 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 TMEM223A0PJW6 202 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 IGHV1-46P01743 117 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 ELANEP08246 267 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 TMEM258P61165 79 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 GFRALQ6UXV0 394 aa6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 MRPL53Q96EL3 112 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-207ENST00000469334 CUL9Q8IWT3 2517 aa6.87□□□□□ -1.31
SMARCE1-207ENST00000469334 MUC3AQ02505 3323 aa6.87□□□□□ -1.31
SMARCE1-207ENST00000469334 H7C2G1 150 aa6.87□□□□□ -1.31
SMARCE1-207ENST00000469334 ATOX1O00244 68 aa6.87□□□□□ -1.31
SMARCE1-207ENST00000469334 LST1O00453 97 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms