RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 LINC01551Q86U37 167 aa5.93□□□□□ -1.46
HDAC6-216ENST00000468949 SSBP4Q9BWG4 385 aaPredicted RBP5.93□□□□□ -1.46
HDAC6-216ENST00000468949 SEC11CQ9BY50 192 aa5.93□□□□□ -1.46
HDAC6-216ENST00000468949 TP53TG1Q9Y2A0 90 aa5.93□□□□□ -1.46
HDAC6-216ENST00000468949 DNAH9Q9NYC9 4486 aa5.92□□□□□ -1.46
HDAC6-216ENST00000468949 TMEM189A5PLL7 270 aa5.92□□□□□ -1.46
HDAC6-216ENST00000468949 ZNF705GA8MUZ8 300 aaPredicted RBP5.92□□□□□ -1.46
HDAC6-216ENST00000468949 CRXO43186 299 aaPredicted RBP5.92□□□□□ -1.46
HDAC6-216ENST00000468949 GATCO43716 136 aaKnown RBP5.92□□□□□ -1.46
HDAC6-216ENST00000468949 ASIPP42127 132 aa5.92□□□□□ -1.46
HDAC6-216ENST00000468949 RPS20P60866 119 aaKnown RBP5.92□□□□□ -1.46
HDAC6-216ENST00000468949 ZNF415Q09FC8 603 aa5.92□□□□□ -1.46
HDAC6-216ENST00000468949 KIR3DS1Q14943 382 aa5.92□□□□□ -1.46
HDAC6-216ENST00000468949 LINC00322Q6ZN03 302 aaPredicted RBP5.92□□□□□ -1.46
HDAC6-216ENST00000468949 COX8CQ7Z4L0 72 aa5.92□□□□□ -1.46
HDAC6-216ENST00000468949 OR11H2Q8NH07 326 aa5.92□□□□□ -1.46
HDAC6-216ENST00000468949 OCC1Q8TAD7 63 aa5.92□□□□□ -1.46
HDAC6-216ENST00000468949 C16orf74Q96GX8 76 aa5.92□□□□□ -1.46
HDAC6-216ENST00000468949 MLST8Q9BVC4 326 aa5.92□□□□□ -1.46
HDAC6-216ENST00000468949 TMSB15BA0A087X1C1 80 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 SMIM9A6NGZ8 99 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 SNURFLB1AK76 121 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 K7EN84 100 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 PPP1R2P9O14990 202 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 APOC3P02656 99 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 GIG44P09565 113 aaPredicted RBP5.91□□□□□ -1.46
HDAC6-216ENST00000468949 ZNF80P51504 273 aaPredicted RBP5.91□□□□□ -1.46
HDAC6-216ENST00000468949 RPL23P62829 140 aaKnown RBP5.91□□□□□ -1.46
HDAC6-216ENST00000468949 SBSPONQ8IVN8 264 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 SVBPQ8N300 66 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 OR2D3Q8NGH3 330 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 ISOC2Q96AB3 205 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 RNF183Q96D59 192 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 SFRP2Q96HF1 295 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 RNASE7Q9H1E1 156 aaKnown RBP5.91□□□□□ -1.46
HDAC6-216ENST00000468949 RPP21Q9H633 154 aaKnown RBP5.91□□□□□ -1.46
HDAC6-216ENST00000468949 RETNQ9HD89 108 aa5.91□□□□□ -1.46
HDAC6-216ENST00000468949 TIMM8BQ9Y5J9 83 aaPredicted RBP5.91□□□□□ -1.46
HDAC6-216ENST00000468949 ZNF324O75467 553 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-216ENST00000468949 SNAPINO95295 136 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 IGLV2-8P01709 118 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 MT-ND4LP03901 98 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 RBMY1A1P0DJD3 496 aaKnown RBP5.9□□□□□ -1.46
HDAC6-216ENST00000468949 RBMY1CP0DJD4 496 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 MIFP14174 115 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 ADCYAP1P18509 176 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 EMP1P54849 157 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 RBMY1FQ15415 496 aaKnown RBP5.9□□□□□ -1.46
HDAC6-216ENST00000468949 ANXA2RQ3ZCQ2 193 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 ZNF705AQ6ZN79 300 aaPredicted RBP5.9□□□□□ -1.46
HDAC6-216ENST00000468949 ZNF493Q6ZR52 646 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 FAM231DQ6ZW35 169 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 C1orf158Q8N1D5 194 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 CSNK1G2-AS1Q8NCQ2 148 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 OR10G8Q8NGN5 311 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 TMEM263Q8WUH6 116 aaKnown RBP5.9□□□□□ -1.46
HDAC6-216ENST00000468949 BORCS7Q96B45 105 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 TPPP3Q9BW30 176 aa5.9□□□□□ -1.46
HDAC6-216ENST00000468949 AGRNO00468 2067 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 TEX48A0A1B0GUV7 120 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 C19orf71A6NCJ1 209 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 A8MWL6 223 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 TYMSP04818 313 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 NHLRC4P0CG21 123 aaPredicted RBP5.89□□□□□ -1.47
HDAC6-216ENST00000468949 RPL19P84098 196 aaKnown RBP5.89□□□□□ -1.47
HDAC6-216ENST00000468949 RHEBQ15382 184 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 NUDT10Q8NFP7 164 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 NUDT11Q96G61 164 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 NEU1Q99519 415 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 TM2D3Q9BRN9 247 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 OVOL2Q9BRP0 275 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 LINC00467Q9BRT7 94 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 OSTCQ9NRP0 149 aa5.89□□□□□ -1.47
HDAC6-216ENST00000468949 CARHSP1Q9Y2V2 147 aaKnown RBP5.89□□□□□ -1.47
HDAC6-216ENST00000468949 IGHV4-28A0A0C4DH34 117 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 GRIFINA4D1Z8 144 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 H3BVH4 76 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 CXCL1P09341 107 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 CRIP1P50238 77 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 TDRG1Q3Y452 100 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 CT83Q5H943 113 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 Q6ZQT7 251 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 FER1L6-AS1Q8NA97 138 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 SYT8Q8NBV8 401 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 RPS10P5Q9NQ39 176 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 PHLDA3Q9Y5J5 127 aa5.88□□□□□ -1.47
HDAC6-216ENST00000468949 IGKV3D-20A0A0C4DH25 116 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 A0A1W2PPQ1 181 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 GNRH2O43555 120 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 S100PP25815 95 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 TCL1AP56279 114 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 RNF212Q495C1 297 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 SPANXN1Q5VSR9 72 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 KCNIP4Q6PIL6 250 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 CLRN3Q8NCR9 226 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 RNASE8Q8TDE3 154 aaKnown RBP5.87□□□□□ -1.47
HDAC6-216ENST00000468949 SPXQ9BT56 116 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 CTDSP1Q9GZU7 261 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 GSN-AS1Q9NRJ2 163 aa5.87□□□□□ -1.47
HDAC6-216ENST00000468949 C11orf21Q9P2W6 132 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms