RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 FANCD2OSQ96PS1 177 aa10.74□□□□□ -0.69
BRAT1-203ENST00000467558 DNAL4O96015 105 aa10.74□□□□□ -0.69
BRAT1-203ENST00000467558 PLA2G5P39877 138 aa10.74□□□□□ -0.69
BRAT1-203ENST00000467558 ZNF295-AS1Q8N0V1 137 aa10.74□□□□□ -0.69
BRAT1-203ENST00000467558 OR5A1Q8NGJ0 315 aa10.74□□□□□ -0.69
BRAT1-203ENST00000467558 ZNF48Q96MX3 618 aaPredicted RBP10.74□□□□□ -0.69
BRAT1-203ENST00000467558 SPCS1Q9Y6A9 102 aa10.74□□□□□ -0.69
BRAT1-203ENST00000467558 C1orf229Q6ZS94 237 aaPredicted RBP10.74□□□□□ -0.69
BRAT1-203ENST00000467558 KNCNA6PVL3 124 aa10.73□□□□□ -0.69
BRAT1-203ENST00000467558 H3BUT2 72 aa10.73□□□□□ -0.69
BRAT1-203ENST00000467558 FOXI2Q6ZQN5 318 aa10.73□□□□□ -0.69
BRAT1-203ENST00000467558 COL5A1P20908 1838 aaPredicted RBP10.73□□□□□ -0.69
BRAT1-203ENST00000467558 HIVEP3Q5T1R4 2406 aa10.73□□□□□ -0.69
BRAT1-203ENST00000467558 F6UB75 175 aa10.73□□□□□ -0.69
BRAT1-203ENST00000467558 MALP21145 153 aa10.73□□□□□ -0.69
BRAT1-203ENST00000467558 C2orf66Q6UXQ4 117 aa10.73□□□□□ -0.69
BRAT1-203ENST00000467558 PLEKHB2Q96CS7 222 aa10.73□□□□□ -0.69
BRAT1-203ENST00000467558 MCRIP2Q9BUT9 160 aaKnown RBP10.73□□□□□ -0.69
BRAT1-203ENST00000467558 TSSC4Q9Y5U2 329 aaPredicted RBP10.73□□□□□ -0.69
BRAT1-203ENST00000467558 C16orf54Q6UWD8 224 aa10.72□□□□□ -0.69
BRAT1-203ENST00000467558 Q71RC1 249 aaPredicted RBP10.72□□□□□ -0.69
BRAT1-203ENST00000467558 DEFB130BP0DP73 79 aa10.72□□□□□ -0.69
BRAT1-203ENST00000467558 DEFB130AP0DP74 79 aa10.72□□□□□ -0.69
BRAT1-203ENST00000467558 SDHAF1A6NFY7 115 aa10.72□□□□□ -0.69
BRAT1-203ENST00000467558 RIPPLY3P57055 190 aa10.72□□□□□ -0.69
BRAT1-203ENST00000467558 C20orf144Q9BQM9 153 aa10.72□□□□□ -0.69
BRAT1-203ENST00000467558 SIGLEC8Q9NYZ4 499 aa10.72□□□□□ -0.69
BRAT1-203ENST00000467558 KLF12Q9Y4X4 402 aa10.72□□□□□ -0.69
BRAT1-203ENST00000467558 PLXNB1O43157 2135 aa10.72□□□□□ -0.69
BRAT1-203ENST00000467558 IGHV3-64A0A075B6Q5 118 aa10.71□□□□□ -0.69
BRAT1-203ENST00000467558 TRAV2A0A0B4J234 112 aa10.71□□□□□ -0.69
BRAT1-203ENST00000467558 C11orf71Q6IPW1 123 aa10.71□□□□□ -0.69
BRAT1-203ENST00000467558 PHLDA1Q8WV24 401 aaPredicted RBP10.71□□□□□ -0.69
BRAT1-203ENST00000467558 C1orf159Q96HA4 380 aa10.71□□□□□ -0.69
BRAT1-203ENST00000467558 IGF2BP2-AS1Q96M15 143 aa10.71□□□□□ -0.69
BRAT1-203ENST00000467558 CCL24O00175 119 aa10.71□□□□□ -0.7
BRAT1-203ENST00000467558 NPYP01303 97 aa10.71□□□□□ -0.7
BRAT1-203ENST00000467558 Q6ZWC4 215 aa10.71□□□□□ -0.7
BRAT1-203ENST00000467558 IGKV1D-37A0A075B6S9 117 aa10.7□□□□□ -0.7
BRAT1-203ENST00000467558 TMEM89A2RUT3 159 aa10.7□□□□□ -0.7
BRAT1-203ENST00000467558 LOXL1Q08397 574 aaPredicted RBP10.7□□□□□ -0.7
BRAT1-203ENST00000467558 DEFB136Q30KP8 78 aa10.7□□□□□ -0.7
BRAT1-203ENST00000467558 MORN3Q6PF18 240 aaPredicted RBP10.7□□□□□ -0.7
BRAT1-203ENST00000467558 TMEM238C9JI98 176 aa10.7□□□□□ -0.7
BRAT1-203ENST00000467558 K7EMT4 169 aa10.7□□□□□ -0.7
BRAT1-203ENST00000467558 TNFRSF13BO14836 293 aaPredicted RBP10.7□□□□□ -0.7
BRAT1-203ENST00000467558 SRSF2Q01130 221 aaKnown RBP10.7□□□□□ -0.7
BRAT1-203ENST00000467558 POLR3KQ9Y2Y1 108 aaPredicted RBP10.7□□□□□ -0.7
BRAT1-203ENST00000467558 IGHV1-24A0A0C4DH33 117 aa10.7□□□□□ -0.7
BRAT1-203ENST00000467558 COA6Q5JTJ3 125 aaKnown RBP10.7□□□□□ -0.7
BRAT1-203ENST00000467558 CFHR4Q92496 578 aa10.7□□□□□ -0.7
BRAT1-203ENST00000467558 SMIM2Q9BVW6 85 aa10.7□□□□□ -0.7
BRAT1-203ENST00000467558 TP53TG1Q9Y2A0 90 aa10.7□□□□□ -0.7
BRAT1-203ENST00000467558 ABCA2Q9BZC7 2435 aa10.7□□□□□ -0.7
BRAT1-203ENST00000467558 A6NDX4 124 aa10.69□□□□□ -0.7
BRAT1-203ENST00000467558 CRPP02741 224 aa10.69□□□□□ -0.7
BRAT1-203ENST00000467558 BCL6BQ8N143 479 aaPredicted RBP10.69□□□□□ -0.7
BRAT1-203ENST00000467558 SPXQ9BT56 116 aa10.69□□□□□ -0.7
BRAT1-203ENST00000467558 TRAV26-2A0A0B4J265 109 aa10.69□□□□□ -0.7
BRAT1-203ENST00000467558 I3L3M4 83 aa10.69□□□□□ -0.7
BRAT1-203ENST00000467558 DMRTA1Q5VZB9 504 aa10.69□□□□□ -0.7
BRAT1-203ENST00000467558 MPV17L2Q567V2 206 aa10.68□□□□□ -0.7
BRAT1-203ENST00000467558 GPHB5Q86YW7 130 aa10.68□□□□□ -0.7
BRAT1-203ENST00000467558 SPAG8Q99932 426 aaPredicted RBP10.68□□□□□ -0.7
BRAT1-203ENST00000467558 IGLC2P0DOY2 106 aa10.68□□□□□ -0.7
BRAT1-203ENST00000467558 AZU1P20160 251 aa10.68□□□□□ -0.7
BRAT1-203ENST00000467558 C20orf78Q9BR46 151 aa10.68□□□□□ -0.7
BRAT1-203ENST00000467558 A0A1B0GWB2 263 aa10.68□□□□□ -0.7
BRAT1-203ENST00000467558 MRPL52Q86TS9 123 aaKnown RBP10.68□□□□□ -0.7
BRAT1-203ENST00000467558 STPG4Q8N801 248 aa10.68□□□□□ -0.7
BRAT1-203ENST00000467558 A0A087X0K7 114 aa10.68□□□□□ -0.7
BRAT1-203ENST00000467558 TRBV7-9A0A0J9YWB2 115 aa10.68□□□□□ -0.7
BRAT1-203ENST00000467558 TMEM141Q96I45 108 aa10.68□□□□□ -0.7
BRAT1-203ENST00000467558 MEGF9Q9H1U4 602 aa10.68□□□□□ -0.7
BRAT1-203ENST00000467558 SLURP1P55000 103 aa10.67□□□□□ -0.7
BRAT1-203ENST00000467558 RASL10AQ92737 203 aa10.67□□□□□ -0.7
BRAT1-203ENST00000467558 GNRH2O43555 120 aa10.67□□□□□ -0.7
BRAT1-203ENST00000467558 EBI3Q14213 229 aa10.67□□□□□ -0.7
BRAT1-203ENST00000467558 LY6LH3BQJ8 138 aa10.66□□□□□ -0.7
BRAT1-203ENST00000467558 KLF5Q13887 457 aaPredicted RBP10.66□□□□□ -0.7
BRAT1-203ENST00000467558 A0A0U1RRA0 63 aa10.66□□□□□ -0.7
BRAT1-203ENST00000467558 LGALS9BQ3B8N2 356 aa10.66□□□□□ -0.7
BRAT1-203ENST00000467558 LGALS9CQ6DKI2 356 aa10.66□□□□□ -0.7
BRAT1-203ENST00000467558 LRRC75A-AS1Q8N1F1 130 aa10.66□□□□□ -0.7
BRAT1-203ENST00000467558 ZNF503Q96F45 646 aa10.66□□□□□ -0.7
BRAT1-203ENST00000467558 ZNF479Q96JC4 524 aa10.66□□□□□ -0.7
BRAT1-203ENST00000467558 IGHV3-16A0A0C4DH30 117 aa10.66□□□□□ -0.7
BRAT1-203ENST00000467558 CRYGBP07316 175 aa10.66□□□□□ -0.7
BRAT1-203ENST00000467558 TRAV13-1A0A0B4J241 112 aa10.66□□□□□ -0.7
BRAT1-203ENST00000467558 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
BRAT1-203ENST00000467558 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
BRAT1-203ENST00000467558 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
BRAT1-203ENST00000467558 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
BRAT1-203ENST00000467558 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
BRAT1-203ENST00000467558 PMVKQ15126 192 aa10.65□□□□□ -0.7
BRAT1-203ENST00000467558 COL4A2P08572 1712 aa10.65□□□□□ -0.7
BRAT1-203ENST00000467558 GAGE12JA6NER3 117 aa10.65□□□□□ -0.7
BRAT1-203ENST00000467558 GAGE1Q13065 139 aa10.65□□□□□ -0.7
BRAT1-203ENST00000467558 GAGE4Q13068 117 aa10.65□□□□□ -0.7
BRAT1-203ENST00000467558 GAGE5Q13069 117 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms