RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 VGLL1Q99990 258 aa4.85□□□□□ -1.63
UBXN4-205ENST00000467065 PYGO2Q9BRQ0 406 aa4.85□□□□□ -1.63
UBXN4-205ENST00000467065 NAT8Q9UHE5 227 aa4.85□□□□□ -1.63
UBXN4-205ENST00000467065 ALMS1Q8TCU4 4167 aa4.85□□□□□ -1.63
UBXN4-205ENST00000467065 HYDINQ4G0P3 5121 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 TRAV12-2A0A075B6T6 113 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 TRBV6-1A0A0K0K1D8 114 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 LCE6AA0A183 80 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 TEX48A0A1B0GUV7 120 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 PPP1R2P9O14990 202 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 MT-ND4LP03901 98 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 PFN1P07737 140 aaKnown RBP4.84□□□□□ -1.63
UBXN4-205ENST00000467065 SFTA3P0C7M3 94 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 PNRC1Q12796 327 aaPredicted RBP4.84□□□□□ -1.63
UBXN4-205ENST00000467065 ZNF124Q15973 351 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 CENPWQ5EE01 88 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 ZNF493Q6ZR52 646 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 SYT8Q8NBV8 401 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 OR11H2Q8NH07 326 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 IL17DQ8TAD2 202 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 LINC00479Q96M42 142 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 TP53TG1Q9Y2A0 90 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 KLF12Q9Y4X4 402 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 LY96Q9Y6Y9 160 aa4.84□□□□□ -1.63
UBXN4-205ENST00000467065 DNAH1Q9P2D7 4330 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 IGHV1OR15-1A0A075B7D0 117 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 TRAV8-1A0A0A6YYK1 113 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 ZNF705GA8MUZ8 300 aaPredicted RBP4.83□□□□□ -1.64
UBXN4-205ENST00000467065 B4DEV8 164 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 C9JCJ5 164 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 LTAP01374 205 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 MIFP14174 115 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 ASIPP42127 132 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 ADIRFQ15847 76 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 DEFB135Q30KP9 77 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 GDF5OSQ5U4N7 250 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 Q8TAT8 98 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 C11orf52Q96A22 123 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 TVP23CQ96ET8 276 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 C16orf74Q96GX8 76 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 NEU1Q99519 415 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 OVOL2Q9BRP0 275 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 PARLQ9H300 379 aa4.83□□□□□ -1.64
UBXN4-205ENST00000467065 TIMM8BQ9Y5J9 83 aaPredicted RBP4.83□□□□□ -1.64
UBXN4-205ENST00000467065 LOC105371267A0A1B0GV96 52 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 CXorf65A6NEN9 183 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 A8MWL6 223 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 GATCO43716 136 aaKnown RBP4.82□□□□□ -1.64
UBXN4-205ENST00000467065 SRP19P09132 144 aaKnown RBP4.82□□□□□ -1.64
UBXN4-205ENST00000467065 SPART-AS1P0CW21 52 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 SMIM17P0DL12 118 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 CRISP2P16562 243 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 S100PP25815 95 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 EMP1P54849 157 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 DEFB1P60022 68 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 ZNF415Q09FC8 603 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 MUC21Q5SSG8 566 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 IBA57Q5T440 356 aaKnown RBP4.82□□□□□ -1.64
UBXN4-205ENST00000467065 Q86TA4 180 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 NHLRC2Q8NBF2 726 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 OR2D3Q8NGH3 330 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 C2CD4CQ8TF44 421 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 RNF183Q96D59 192 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 TPPP3Q9BW30 176 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 PHLDA3Q9Y5J5 127 aa4.82□□□□□ -1.64
UBXN4-205ENST00000467065 TRGV2A0A075B6R0 118 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 A0A0J9YWU9 116 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 A0A1W2PPQ1 181 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 TMEM218A2RU14 115 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 F2Z2F3 143 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 SNAPINO95295 136 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 PRB4P10163 310 aaPredicted RBP4.81□□□□□ -1.64
UBXN4-205ENST00000467065 BTN1A1Q13410 526 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 GFI1BQ5VTD9 330 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 KCNIP4Q6PIL6 250 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 SVBPQ8N300 66 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.81□□□□□ -1.64
UBXN4-205ENST00000467065 OR10G8Q8NGN5 311 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 OCC1Q8TAD7 63 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 ANAPC16Q96DE5 110 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 SPXQ9BT56 116 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 SEC11CQ9BY50 192 aa4.81□□□□□ -1.64
UBXN4-205ENST00000467065 EPPK1P58107 5090 aaKnown RBP4.8□□□□□ -1.64
UBXN4-205ENST00000467065 KLLNB2CW77 178 aa4.8□□□□□ -1.64
UBXN4-205ENST00000467065 SH2D1AO60880 128 aa4.8□□□□□ -1.64
UBXN4-205ENST00000467065 APOC3P02656 99 aa4.8□□□□□ -1.64
UBXN4-205ENST00000467065 S100A8P05109 93 aa4.8□□□□□ -1.64
UBXN4-205ENST00000467065 RHEBQ15382 184 aa4.8□□□□□ -1.64
UBXN4-205ENST00000467065 SPANXN1Q5VSR9 72 aa4.8□□□□□ -1.64
UBXN4-205ENST00000467065 Q6AWC8 147 aa4.8□□□□□ -1.64
UBXN4-205ENST00000467065 TMEM263Q8WUH6 116 aaKnown RBP4.8□□□□□ -1.64
UBXN4-205ENST00000467065 SFRP2Q96HF1 295 aa4.8□□□□□ -1.64
UBXN4-205ENST00000467065 BTF3L4Q96K17 158 aa4.8□□□□□ -1.64
UBXN4-205ENST00000467065 C8orf49Q96NF6 230 aa4.8□□□□□ -1.64
UBXN4-205ENST00000467065 DERL1Q9BUN8 251 aa4.8□□□□□ -1.64
UBXN4-205ENST00000467065 RPP21Q9H633 154 aaKnown RBP4.8□□□□□ -1.64
UBXN4-205ENST00000467065 TMSB15BA0A087X1C1 80 aa4.79□□□□□ -1.64
UBXN4-205ENST00000467065 LYRM9A8MSI8 78 aa4.79□□□□□ -1.64
UBXN4-205ENST00000467065 IGLV2-11P01706 119 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms