RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 GNRH2O43555 120 aa6.85□□□□□ -1.31
HPS4-209ENST00000466781 PPDPFLQ8WWR9 84 aa6.85□□□□□ -1.31
HPS4-209ENST00000466781 COX7A2LO14548 114 aa6.85□□□□□ -1.31
HPS4-209ENST00000466781 DIAPH2-AS1Q14236 149 aa6.85□□□□□ -1.31
HPS4-209ENST00000466781 LGALS9BQ3B8N2 356 aa6.85□□□□□ -1.31
HPS4-209ENST00000466781 LGALS9CQ6DKI2 356 aa6.85□□□□□ -1.31
HPS4-209ENST00000466781 C9orf47Q6ZRZ4 202 aa6.85□□□□□ -1.31
HPS4-209ENST00000466781 Q6ZWC4 215 aa6.85□□□□□ -1.31
HPS4-209ENST00000466781 TRAV4A0A0B4J268 109 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 F6UB75 175 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 IL17DQ8TAD2 202 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 CYYR1Q96J86 154 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 NRGNQ92686 78 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 F8VRH5 84 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 C15orf65H3BRN8 121 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 NPYP01303 97 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 WT1-ASQ06250 92 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 IGHV4-28A0A0C4DH34 117 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 RBAKDNA6NC62 111 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 DAZAP2Q15038 168 aaPredicted RBP6.84□□□□□ -1.31
HPS4-209ENST00000466781 WIPF2Q8TF74 440 aaPredicted RBP6.84□□□□□ -1.31
HPS4-209ENST00000466781 Q9H8V8 135 aa6.84□□□□□ -1.31
HPS4-209ENST00000466781 MRPL35Q9NZE8 188 aaKnown RBP6.84□□□□□ -1.31
HPS4-209ENST00000466781 IGHV4-30-2A0A087WSY4 118 aa6.84□□□□□ -1.32
HPS4-209ENST00000466781 C9orf118A6NHY6 69 aa6.84□□□□□ -1.32
HPS4-209ENST00000466781 IGLC1P0CG04 106 aa6.84□□□□□ -1.32
HPS4-209ENST00000466781 C5orf38Q86SI9 138 aa6.84□□□□□ -1.32
HPS4-209ENST00000466781 KAAG1Q9UBP8 84 aa6.84□□□□□ -1.32
HPS4-209ENST00000466781 IGLV10-54A0A075B6I4 117 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 C5orf47Q569G3 176 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 FAM231DQ6ZW35 169 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 C15orf53Q8NAA6 179 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 KIAA1549LQ6ZVL6 1849 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 IGHV4-38-2P0DP08 117 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 HLA-DMBP28068 263 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 TMEM258P61165 79 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 DAZ2Q13117 558 aaKnown RBP6.83□□□□□ -1.32
HPS4-209ENST00000466781 DAZ4Q86SG3 579 aaKnown RBP6.83□□□□□ -1.32
HPS4-209ENST00000466781 FXYD5Q96DB9 178 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 RSPO3Q9BXY4 272 aaPredicted RBP6.83□□□□□ -1.32
HPS4-209ENST00000466781 DAZ3Q9NR90 486 aaKnown RBP6.83□□□□□ -1.32
HPS4-209ENST00000466781 PLXNB3Q9ULL4 1909 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 IFITM1P13164 125 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 SPRNQ5BIV9 151 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 ZNF493Q6ZR52 646 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 DYNAPQ8N1N2 210 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 ANKRD29Q8N6D5 301 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 DOCK8Q8NF50 2099 aa6.83□□□□□ -1.32
HPS4-209ENST00000466781 IGHV4-61A0A0C4DH41 118 aa6.82□□□□□ -1.32
HPS4-209ENST00000466781 F8W1H4 67 aa6.82□□□□□ -1.32
HPS4-209ENST00000466781 C8orf31Q8N9H6 132 aa6.82□□□□□ -1.32
HPS4-209ENST00000466781 V9GYV3 84 aa6.82□□□□□ -1.32
HPS4-209ENST00000466781 NDUFS7O75251 213 aa6.82□□□□□ -1.32
HPS4-209ENST00000466781 IGHG2P01859 326 aa6.82□□□□□ -1.32
HPS4-209ENST00000466781 ZNF843Q8N446 348 aa6.82□□□□□ -1.32
HPS4-209ENST00000466781 CABIN1Q9Y6J0 2220 aa6.82□□□□□ -1.32
HPS4-209ENST00000466781 CENPVL3A0A0U1RRI6 287 aa6.82□□□□□ -1.32
HPS4-209ENST00000466781 H3BQ85 93 aa6.82□□□□□ -1.32
HPS4-209ENST00000466781 SPRY4Q9C004 299 aa6.82□□□□□ -1.32
HPS4-209ENST00000466781 A8MWP6 167 aa6.81□□□□□ -1.32
HPS4-209ENST00000466781 NDUFA1O15239 70 aa6.81□□□□□ -1.32
HPS4-209ENST00000466781 ZNF491Q8N8L2 437 aa6.81□□□□□ -1.32
HPS4-209ENST00000466781 NCR3O14931 201 aa6.81□□□□□ -1.32
HPS4-209ENST00000466781 LTAP01374 205 aa6.81□□□□□ -1.32
HPS4-209ENST00000466781 AMTNQ6UX39 209 aa6.81□□□□□ -1.32
HPS4-209ENST00000466781 POLR3KQ9Y2Y1 108 aaPredicted RBP6.81□□□□□ -1.32
HPS4-209ENST00000466781 LAMA3Q16787 3333 aa6.81□□□□□ -1.32
HPS4-209ENST00000466781 COX8AP10176 69 aa6.81□□□□□ -1.32
HPS4-209ENST00000466781 SMAD5-AS1Q9Y6J3 95 aa6.81□□□□□ -1.32
HPS4-209ENST00000466781 BAALC-AS2P0C853 105 aa6.81□□□□□ -1.32
HPS4-209ENST00000466781 MYCNOSP40205 109 aa6.81□□□□□ -1.32
HPS4-209ENST00000466781 K7EMI3 77 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 Q8NFD4 153 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 COX7B2Q8TF08 81 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 RNF138Q8WVD3 245 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 ESM1Q9NQ30 184 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 CACNA1IQ9P0X4 2223 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 PRSS47A8MTI9 375 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 IGLL5B9A064 214 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 RBM3P98179 157 aaKnown RBP6.8□□□□□ -1.32
HPS4-209ENST00000466781 ZNF664Q8N3J9 261 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 YLPM1P49750 1951 aaKnown RBP6.8□□□□□ -1.32
HPS4-209ENST00000466781 WFDC9Q8NEX5 89 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 LENEPQ9Y5L5 61 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 DENND4CQ5VZ89 1909 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 HTTP42858 3142 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 MP68P56378 58 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 HIST2H2BCQ6DN03 193 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 C4orf3Q8WVX3 66 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 VSIG2Q96IQ7 327 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 C17orf77Q96MU5 243 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 RP1P56715 2156 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 IGHV4OR15-8A0A075B7B6 117 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 A0A087WW49 117 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 SEC61GP60059 68 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 NPBQ8NG41 125 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 B9D2Q9BPU9 175 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 HHLA3Q9XRX5 114 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 PI4KAP42356 2102 aa6.8□□□□□ -1.32
HPS4-209ENST00000466781 EP300Q09472 2414 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms