RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 RASL10AQ92737 203 aa12.01□□□□□ -0.49
COL7A1-206ENST00000466591 MED28Q9H204 178 aa12.01□□□□□ -0.49
COL7A1-206ENST00000466591 ALG5Q9Y673 324 aa12.01□□□□□ -0.49
COL7A1-206ENST00000466591 TRAV8-1A0A0A6YYK1 113 aa12□□□□□ -0.49
COL7A1-206ENST00000466591 SERTM2A0A1B0GWG4 89 aa12□□□□□ -0.49
COL7A1-206ENST00000466591 GNRH2O43555 120 aa12□□□□□ -0.49
COL7A1-206ENST00000466591 ARL6IP6Q8N6S5 226 aa12□□□□□ -0.49
COL7A1-206ENST00000466591 MBP02144 154 aa11.99□□□□□ -0.49
COL7A1-206ENST00000466591 KRTAP10-2P60368 255 aa11.99□□□□□ -0.49
COL7A1-206ENST00000466591 SGK494Q96LW2 274 aa11.99□□□□□ -0.49
COL7A1-206ENST00000466591 IGHV3-16A0A0C4DH30 117 aa11.98□□□□□ -0.49
COL7A1-206ENST00000466591 TYMSP04818 313 aa11.98□□□□□ -0.49
COL7A1-206ENST00000466591 TDRG1Q3Y452 100 aa11.98□□□□□ -0.49
COL7A1-206ENST00000466591 SH2D6Q7Z4S9 175 aa11.98□□□□□ -0.49
COL7A1-206ENST00000466591 C5orf17Q8NAS9 161 aa11.98□□□□□ -0.49
COL7A1-206ENST00000466591 INO80EQ8NBZ0 244 aaPredicted RBP11.98□□□□□ -0.49
COL7A1-206ENST00000466591 FBLL1A6NHQ2 334 aaKnown RBP11.97□□□□□ -0.49
COL7A1-206ENST00000466591 ACTR3CQ9C0K3 210 aaPredicted RBP11.97□□□□□ -0.49
COL7A1-206ENST00000466591 SCRT2Q9NQ03 307 aa11.97□□□□□ -0.49
COL7A1-206ENST00000466591 TMEM167BQ9NRX6 74 aa11.97□□□□□ -0.49
COL7A1-206ENST00000466591 PGPEP1Q9NXJ5 209 aa11.97□□□□□ -0.49
COL7A1-206ENST00000466591 K7EP13 123 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 TAAR5O14804 337 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 PSCAO43653 123 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 CXorf1O96002 111 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 CRYGDP07320 174 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 GCHFRP30047 84 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 ZNF876PQ49A33 203 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 PRNTQ86SH4 94 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 WFDC10BQ8IUB3 73 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 C10orf126Q8N4M7 172 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 RAB24Q969Q5 203 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 PRADC1Q9BSG0 188 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 PSMG3Q9BT73 122 aaPredicted RBP11.96□□□□□ -0.49
COL7A1-206ENST00000466591 BATF3Q9NR55 127 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 MSRB1Q9NZV6 116 aa11.96□□□□□ -0.49
COL7A1-206ENST00000466591 GCGP01275 180 aa11.95□□□□□ -0.5
COL7A1-206ENST00000466591 TCRAP04437 139 aa11.95□□□□□ -0.5
COL7A1-206ENST00000466591 STAG3L2P0CL84 134 aa11.95□□□□□ -0.5
COL7A1-206ENST00000466591 STAG3L3P0CL85 134 aa11.95□□□□□ -0.5
COL7A1-206ENST00000466591 ATP6V0CP27449 155 aa11.95□□□□□ -0.5
COL7A1-206ENST00000466591 SERF2P84101 59 aa11.95□□□□□ -0.5
COL7A1-206ENST00000466591 OR2G3Q8NGZ4 309 aa11.95□□□□□ -0.5
COL7A1-206ENST00000466591 TNFRSF18Q9Y5U5 241 aa11.95□□□□□ -0.5
COL7A1-206ENST00000466591 BORCS7-ASMTA0A0B4J1R7 106 aa11.94□□□□□ -0.5
COL7A1-206ENST00000466591 TRAV8-6A0A0B4J262 113 aa11.94□□□□□ -0.5
COL7A1-206ENST00000466591 PTTG1O95997 202 aa11.94□□□□□ -0.5
COL7A1-206ENST00000466591 SUMO1P63165 101 aaKnown RBP11.94□□□□□ -0.5
COL7A1-206ENST00000466591 FLI1Q01543 452 aaPredicted RBP11.94□□□□□ -0.5
COL7A1-206ENST00000466591 SMUG1Q53HV7 270 aa11.94□□□□□ -0.5
COL7A1-206ENST00000466591 OR10J3Q5JRS4 329 aa11.94□□□□□ -0.5
COL7A1-206ENST00000466591 AQP10Q96PS8 301 aa11.94□□□□□ -0.5
COL7A1-206ENST00000466591 PSG8Q9UQ74 426 aa11.94□□□□□ -0.5
COL7A1-206ENST00000466591 IFNA7P01567 189 aa11.93□□□□□ -0.5
COL7A1-206ENST00000466591 PFN1P07737 140 aaKnown RBP11.93□□□□□ -0.5
COL7A1-206ENST00000466591 S100A4P26447 101 aaKnown RBP11.93□□□□□ -0.5
COL7A1-206ENST00000466591 CDPF1Q6NVV7 123 aa11.93□□□□□ -0.5
COL7A1-206ENST00000466591 Q6ZRN7 208 aaPredicted RBP11.93□□□□□ -0.5
COL7A1-206ENST00000466591 Q8N1X5 172 aa11.93□□□□□ -0.5
COL7A1-206ENST00000466591 CYB561D1Q8N8Q1 229 aa11.93□□□□□ -0.5
COL7A1-206ENST00000466591 TVP23CQ96ET8 276 aa11.93□□□□□ -0.5
COL7A1-206ENST00000466591 KRTAP4-5Q9BYR2 181 aa11.93□□□□□ -0.5
COL7A1-206ENST00000466591 RYR1P21817 5038 aa11.92□□□□□ -0.5
COL7A1-206ENST00000466591 FXYD6-FXYD2A0A087WZ82 144 aa11.92□□□□□ -0.5
COL7A1-206ENST00000466591 IGHV3-73A0A0B4J1V6 119 aa11.92□□□□□ -0.5
COL7A1-206ENST00000466591 LOC100131303A0A0U1RQF7 123 aa11.92□□□□□ -0.5
COL7A1-206ENST00000466591 RHOHQ15669 191 aa11.92□□□□□ -0.5
COL7A1-206ENST00000466591 SAPCD1Q5SSQ6 148 aa11.92□□□□□ -0.5
COL7A1-206ENST00000466591 SH3BGRL3Q9H299 93 aa11.92□□□□□ -0.5
COL7A1-206ENST00000466591 EPDR1Q9UM22 224 aa11.92□□□□□ -0.5
COL7A1-206ENST00000466591 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
COL7A1-206ENST00000466591 IGHV3-38A0A0C4DH36 116 aa11.91□□□□□ -0.5
COL7A1-206ENST00000466591 CIDEAO60543 219 aa11.91□□□□□ -0.5
COL7A1-206ENST00000466591 DNAH10OSP0CZ25 163 aa11.91□□□□□ -0.5
COL7A1-206ENST00000466591 FUSP35637 526 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL7A1-206ENST00000466591 TNFSF18Q9UNG2 199 aa11.91□□□□□ -0.5
COL7A1-206ENST00000466591 A0A087WTM6 91 aa11.9□□□□□ -0.5
COL7A1-206ENST00000466591 GATA1P15976 413 aaPredicted RBP11.9□□□□□ -0.5
COL7A1-206ENST00000466591 TMEM75Q8N9X5 138 aa11.9□□□□□ -0.5
COL7A1-206ENST00000466591 GIPP09681 153 aaPredicted RBP11.89□□□□□ -0.51
COL7A1-206ENST00000466591 UBE2G2P60604 165 aa11.89□□□□□ -0.51
COL7A1-206ENST00000466591 SLC25A29Q8N8R3 303 aa11.89□□□□□ -0.51
COL7A1-206ENST00000466591 GGTLC3B5MD39 225 aa11.88□□□□□ -0.51
COL7A1-206ENST00000466591 ZNF80P51504 273 aaPredicted RBP11.88□□□□□ -0.51
COL7A1-206ENST00000466591 LGALSLQ3ZCW2 172 aaPredicted RBP11.88□□□□□ -0.51
COL7A1-206ENST00000466591 AKR1C8PQ5T2L2 129 aa11.88□□□□□ -0.51
COL7A1-206ENST00000466591 CFAP126Q5VTH2 177 aa11.88□□□□□ -0.51
COL7A1-206ENST00000466591 Q9HAA7 133 aa11.88□□□□□ -0.51
COL7A1-206ENST00000466591 TRBV6-4A0A1B0GX49 114 aa11.87□□□□□ -0.51
COL7A1-206ENST00000466591 A0A1W2PRE2 83 aa11.87□□□□□ -0.51
COL7A1-206ENST00000466591 EPM2AB3EWF7 344 aa11.87□□□□□ -0.51
COL7A1-206ENST00000466591 RS1O15537 224 aa11.87□□□□□ -0.51
COL7A1-206ENST00000466591 MGST1P10620 155 aaKnown RBP11.87□□□□□ -0.51
COL7A1-206ENST00000466591 ZNF506Q5JVG8 444 aa11.87□□□□□ -0.51
COL7A1-206ENST00000466591 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
COL7A1-206ENST00000466591 LRP1BQ9NZR2 4599 aa11.87□□□□□ -0.51
COL7A1-206ENST00000466591 HSPG2P98160 4391 aa11.87□□□□□ -0.51
COL7A1-206ENST00000466591 TRAV34A0A0B4J273 112 aa11.86□□□□□ -0.51
COL7A1-206ENST00000466591 CTXND1A0A1B0GTU2 59 aa11.86□□□□□ -0.51
COL7A1-206ENST00000466591 IGHV3-30P01768 117 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms