RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 DPPA3Q6W0C5 159 aa6.8□□□□□ -1.32
GPNMB-206ENST00000465673 SYT8Q8NBV8 401 aa6.8□□□□□ -1.32
GPNMB-206ENST00000465673 C2orf50Q96LR7 162 aa6.8□□□□□ -1.32
GPNMB-206ENST00000465673 HYLS1Q96M11 299 aa6.8□□□□□ -1.32
GPNMB-206ENST00000465673 DIRC3C9JPN6 131 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 F6UZH7 168 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 PLA2G10O15496 165 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 TYMSP04818 313 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 PVALBP20472 110 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-206ENST00000465673 CSN1S1P47710 185 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 HBG1P69891 147 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 HBG2P69892 147 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 SH2D6Q7Z4S9 175 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 STX12Q86Y82 276 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 BAALCQ8WXS3 180 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 TVP23CQ96ET8 276 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 DNAJC30Q96LL9 226 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 RPH3ALQ9UNE2 315 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 PLA2G2DQ9UNK4 145 aa6.79□□□□□ -1.32
GPNMB-206ENST00000465673 RBAKDNA6NC62 111 aa6.78□□□□□ -1.32
GPNMB-206ENST00000465673 CENPXA8MT69 81 aa6.78□□□□□ -1.32
GPNMB-206ENST00000465673 OR7C2O60412 319 aa6.78□□□□□ -1.32
GPNMB-206ENST00000465673 PFN1P07737 140 aaKnown RBP6.78□□□□□ -1.32
GPNMB-206ENST00000465673 IL7P13232 177 aa6.78□□□□□ -1.32
GPNMB-206ENST00000465673 ATP6V1FQ16864 119 aa6.78□□□□□ -1.32
GPNMB-206ENST00000465673 TDRG1Q3Y452 100 aa6.78□□□□□ -1.32
GPNMB-206ENST00000465673 LELP1Q5T871 98 aa6.78□□□□□ -1.32
GPNMB-206ENST00000465673 DAZ4Q86SG3 579 aaKnown RBP6.78□□□□□ -1.32
GPNMB-206ENST00000465673 DAZ3Q9NR90 486 aaKnown RBP6.78□□□□□ -1.32
GPNMB-206ENST00000465673 TRAV8-1A0A0A6YYK1 113 aa6.77□□□□□ -1.33
GPNMB-206ENST00000465673 FBLL1A6NHQ2 334 aaKnown RBP6.77□□□□□ -1.33
GPNMB-206ENST00000465673 UBE2L3P68036 154 aaKnown RBP6.77□□□□□ -1.33
GPNMB-206ENST00000465673 CFAP126Q5VTH2 177 aa6.77□□□□□ -1.33
GPNMB-206ENST00000465673 OR5C1Q8NGR4 320 aa6.77□□□□□ -1.33
GPNMB-206ENST00000465673 TM2D2Q9BX73 214 aa6.77□□□□□ -1.33
GPNMB-206ENST00000465673 Q9UF83 564 aa6.77□□□□□ -1.33
GPNMB-206ENST00000465673 RS1O15537 224 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 TCRBP04435 133 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 ZNF876PQ49A33 203 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 ATP6V0E2Q8NHE4 81 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 CIRBP-AS1Q8TBR5 109 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 SGK494Q96LW2 274 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 PRADC1Q9BSG0 188 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 CHAC1Q9BUX1 264 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 GTSF1LQ9H1H1 148 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 NUDT15Q9NV35 164 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 C11orf21Q9P2W6 132 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 LENEPQ9Y5L5 61 aa6.76□□□□□ -1.33
GPNMB-206ENST00000465673 TRAV21A0A0B4J279 112 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 TRBV6-4A0A1B0GX49 114 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 PGPA6NDG6 321 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 RBFOX3A6NFN3 312 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 LYRM1O43325 122 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 SIX6O95475 246 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 OXTP01178 125 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 HNRNPA3P51991 378 aaKnown RBP6.75□□□□□ -1.33
GPNMB-206ENST00000465673 GNG5P63218 68 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 LAGE3Q14657 143 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 RHOHQ15669 191 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 GOLT1AQ6ZVE7 132 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 TMEM75Q8N9X5 138 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 WDR61Q9GZS3 305 aaKnown RBP6.75□□□□□ -1.33
GPNMB-206ENST00000465673 RBM38Q9H0Z9 239 aaKnown RBP6.75□□□□□ -1.33
GPNMB-206ENST00000465673 SDF2L1Q9HCN8 221 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 TREM1Q9NP99 234 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 OR5AC2Q9NZP5 309 aa6.75□□□□□ -1.33
GPNMB-206ENST00000465673 GAGE12JA6NER3 117 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 PGPEP1LA6NFU8 196 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 H0YIZ8 118 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 IGLV2-8P01709 118 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 ZNF80P51504 273 aaPredicted RBP6.74□□□□□ -1.33
GPNMB-206ENST00000465673 GAGE1Q13065 139 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 GAGE4Q13068 117 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 GAGE5Q13069 117 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 CNPY1Q3B7I2 92 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 GAGE13Q4V321 117 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 ASB13Q8WXK3 278 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 NMES1Q9C002 83 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
GPNMB-206ENST00000465673 TRAV8-3A0A0A6YYJ7 113 aa6.73□□□□□ -1.33
GPNMB-206ENST00000465673 H2AFB2P0C5Z0 115 aa6.73□□□□□ -1.33
GPNMB-206ENST00000465673 LRRC37A5PQ49AS3 106 aa6.73□□□□□ -1.33
GPNMB-206ENST00000465673 ZNF506Q5JVG8 444 aa6.73□□□□□ -1.33
GPNMB-206ENST00000465673 FFAR4Q5NUL3 377 aa6.73□□□□□ -1.33
GPNMB-206ENST00000465673 TMED6Q8WW62 240 aa6.73□□□□□ -1.33
GPNMB-206ENST00000465673 SAMD10Q9BYL1 202 aa6.73□□□□□ -1.33
GPNMB-206ENST00000465673 OTORQ9NRC9 128 aa6.73□□□□□ -1.33
GPNMB-206ENST00000465673 MBD2Q9UBB5 411 aa6.73□□□□□ -1.33
GPNMB-206ENST00000465673 RNF222A6NCQ9 220 aa6.72□□□□□ -1.33
GPNMB-206ENST00000465673 HMGB3O15347 200 aaKnown RBP6.72□□□□□ -1.33
GPNMB-206ENST00000465673 OR2T35Q8NGX2 323 aa6.72□□□□□ -1.33
GPNMB-206ENST00000465673 CMTM2Q8TAZ6 248 aa6.72□□□□□ -1.33
GPNMB-206ENST00000465673 DAZAP1Q96EP5 407 aaKnown RBP6.72□□□□□ -1.33
GPNMB-206ENST00000465673 KCNS1Q96KK3 526 aa6.72□□□□□ -1.33
GPNMB-206ENST00000465673 C9orf85Q96MD7 179 aa6.72□□□□□ -1.33
GPNMB-206ENST00000465673 IGKV2D-24A0A075B6R9 120 aa6.71□□□□□ -1.34
GPNMB-206ENST00000465673 LINC00694P0DN24 101 aa6.71□□□□□ -1.34
GPNMB-206ENST00000465673 RNASE3P12724 160 aaKnown RBP6.71□□□□□ -1.34
GPNMB-206ENST00000465673 KHDC3LQ587J8 217 aa6.71□□□□□ -1.34
GPNMB-206ENST00000465673 ATP5SQ99766 215 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms