RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 SGK494Q96LW2 274 aa9.73□□□□□ -0.85
LIMD1-203ENST00000465039 GSN-AS1Q9NRJ2 163 aa9.73□□□□□ -0.85
LIMD1-203ENST00000465039 DYNC2H1Q8NCM8 4307 aaKnown RBP9.73□□□□□ -0.85
LIMD1-203ENST00000465039 KMT2CQ8NEZ4 4911 aaKnown RBP9.73□□□□□ -0.85
LIMD1-203ENST00000465039 SPINK4O60575 86 aa9.72□□□□□ -0.85
LIMD1-203ENST00000465039 FAM162BQ5T6X4 162 aa9.72□□□□□ -0.85
LIMD1-203ENST00000465039 TEX261Q6UWH6 196 aa9.72□□□□□ -0.85
LIMD1-203ENST00000465039 C8orf49Q96NF6 230 aa9.72□□□□□ -0.85
LIMD1-203ENST00000465039 IGHV3-16A0A0C4DH30 117 aa9.71□□□□□ -0.86
LIMD1-203ENST00000465039 TMEM250H0YL14 139 aa9.71□□□□□ -0.86
LIMD1-203ENST00000465039 DEFB130BP0DP73 79 aa9.71□□□□□ -0.86
LIMD1-203ENST00000465039 DEFB130AP0DP74 79 aa9.71□□□□□ -0.86
LIMD1-203ENST00000465039 RPL35P42766 123 aaKnown RBP9.71□□□□□ -0.86
LIMD1-203ENST00000465039 ZNF80P51504 273 aaPredicted RBP9.71□□□□□ -0.86
LIMD1-203ENST00000465039 ZNF674Q2M3X9 581 aa9.71□□□□□ -0.86
LIMD1-203ENST00000465039 MUC21Q5SSG8 566 aa9.71□□□□□ -0.86
LIMD1-203ENST00000465039 RASL10AQ92737 203 aa9.71□□□□□ -0.86
LIMD1-203ENST00000465039 PTH2Q96A98 100 aa9.71□□□□□ -0.86
LIMD1-203ENST00000465039 MLST8Q9BVC4 326 aa9.71□□□□□ -0.86
LIMD1-203ENST00000465039 LCE6AA0A183 80 aa9.7□□□□□ -0.86
LIMD1-203ENST00000465039 PIK3CD-AS1Q5SR53 167 aa9.7□□□□□ -0.86
LIMD1-203ENST00000465039 DNLZQ5SXM8 178 aa9.7□□□□□ -0.86
LIMD1-203ENST00000465039 Q6ZQT7 251 aa9.7□□□□□ -0.86
LIMD1-203ENST00000465039 BAGE2Q86Y30 109 aa9.7□□□□□ -0.86
LIMD1-203ENST00000465039 ZC2HC1AQ96GY0 325 aa9.7□□□□□ -0.86
LIMD1-203ENST00000465039 NAGKQ9UJ70 344 aa9.7□□□□□ -0.86
LIMD1-203ENST00000465039 IGHV4-4A0A075B6R2 117 aa9.69□□□□□ -0.86
LIMD1-203ENST00000465039 H3BNG1 76 aa9.69□□□□□ -0.86
LIMD1-203ENST00000465039 TYMSP04818 313 aa9.69□□□□□ -0.86
LIMD1-203ENST00000465039 CXCL1P09341 107 aa9.69□□□□□ -0.86
LIMD1-203ENST00000465039 LINC01559Q495D7 138 aa9.69□□□□□ -0.86
LIMD1-203ENST00000465039 ZNF506Q5JVG8 444 aa9.69□□□□□ -0.86
LIMD1-203ENST00000465039 Q6ZTI0 123 aa9.69□□□□□ -0.86
LIMD1-203ENST00000465039 ZNF767PQ75MW2 155 aa9.69□□□□□ -0.86
LIMD1-203ENST00000465039 C15orf53Q8NAA6 179 aa9.69□□□□□ -0.86
LIMD1-203ENST00000465039 BIN3Q9NQY0 253 aa9.69□□□□□ -0.86
LIMD1-203ENST00000465039 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
LIMD1-203ENST00000465039 TRGV1A0A0A0MS02 117 aa9.68□□□□□ -0.86
LIMD1-203ENST00000465039 RBFOX3A6NFN3 312 aa9.68□□□□□ -0.86
LIMD1-203ENST00000465039 IGLL5B9A064 214 aa9.68□□□□□ -0.86
LIMD1-203ENST00000465039 M0R2P5 195 aa9.68□□□□□ -0.86
LIMD1-203ENST00000465039 CIDEAO60543 219 aa9.68□□□□□ -0.86
LIMD1-203ENST00000465039 MDFICQ9P1T7 246 aa9.68□□□□□ -0.86
LIMD1-203ENST00000465039 C11orf21Q9P2W6 132 aa9.68□□□□□ -0.86
LIMD1-203ENST00000465039 MUC4Q99102 2169 aa9.68□□□□□ -0.86
LIMD1-203ENST00000465039 GAGE12BA1L429 117 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 C9JCJ5 164 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 SH2D1AO60880 128 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 GAGE7O76087 117 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 GAGE12FP0CL80 117 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 GAGE12GP0CL81 117 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 GAGE12IP0CL82 117 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 GNG4P50150 75 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 SLAQ13239 276 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 CENPWQ5EE01 88 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 LGALS9CQ6DKI2 356 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 LINC00476Q8WZB0 136 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 C9orf85Q96MD7 179 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 FAM210AQ96ND0 272 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 SMDT1Q9H4I9 107 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 MED9Q9NWA0 146 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 IL36BQ9NZH7 164 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 APLNQ9ULZ1 77 aa9.67□□□□□ -0.86
LIMD1-203ENST00000465039 PLECQ15149 4684 aaKnown RBP9.66□□□□□ -0.86
LIMD1-203ENST00000465039 IGKV3D-20A0A0C4DH25 116 aa9.66□□□□□ -0.86
LIMD1-203ENST00000465039 MED14OSP0DP75 135 aa9.66□□□□□ -0.86
LIMD1-203ENST00000465039 ASIPP42127 132 aa9.66□□□□□ -0.86
LIMD1-203ENST00000465039 CRIP1P50238 77 aa9.66□□□□□ -0.86
LIMD1-203ENST00000465039 DERL1Q9BUN8 251 aa9.66□□□□□ -0.86
LIMD1-203ENST00000465039 B4DEV8 164 aa9.65□□□□□ -0.86
LIMD1-203ENST00000465039 KRBOX1C9JBD0 128 aa9.65□□□□□ -0.86
LIMD1-203ENST00000465039 F5H768 121 aa9.65□□□□□ -0.86
LIMD1-203ENST00000465039 GNRH2O43555 120 aa9.65□□□□□ -0.86
LIMD1-203ENST00000465039 ORM1P02763 201 aa9.65□□□□□ -0.86
LIMD1-203ENST00000465039 ALMS1Q8TCU4 4167 aa9.64□□□□□ -0.87
LIMD1-203ENST00000465039 P0DMU3 169 aa9.64□□□□□ -0.87
LIMD1-203ENST00000465039 FAM231AP0DMU4 169 aa9.64□□□□□ -0.87
LIMD1-203ENST00000465039 FAM231CP0DMU5 169 aa9.64□□□□□ -0.87
LIMD1-203ENST00000465039 RNASE3P12724 160 aaKnown RBP9.64□□□□□ -0.87
LIMD1-203ENST00000465039 HTN3P15516 51 aa9.64□□□□□ -0.87
LIMD1-203ENST00000465039 S100A4P26447 101 aaKnown RBP9.64□□□□□ -0.87
LIMD1-203ENST00000465039 TMEM88Q6PEY1 159 aa9.64□□□□□ -0.87
LIMD1-203ENST00000465039 MRPL16Q9NX20 251 aaKnown RBP9.64□□□□□ -0.87
LIMD1-203ENST00000465039 LY96Q9Y6Y9 160 aa9.64□□□□□ -0.87
LIMD1-203ENST00000465039 TRBV20OR9-2A0A075B6H5 130 aa9.63□□□□□ -0.87
LIMD1-203ENST00000465039 TRAV4A0A0B4J268 109 aa9.63□□□□□ -0.87
LIMD1-203ENST00000465039 IGLV2-8P01709 118 aa9.63□□□□□ -0.87
LIMD1-203ENST00000465039 ZNF876PQ49A33 203 aa9.63□□□□□ -0.87
LIMD1-203ENST00000465039 TOR2AQ5JU69 321 aa9.63□□□□□ -0.87
LIMD1-203ENST00000465039 EIF5A2Q9GZV4 153 aaKnown RBP9.63□□□□□ -0.87
LIMD1-203ENST00000465039 SCRT2Q9NQ03 307 aa9.63□□□□□ -0.87
LIMD1-203ENST00000465039 DNAH1Q9P2D7 4330 aa9.63□□□□□ -0.87
LIMD1-203ENST00000465039 FAM3BP58499 235 aaPredicted RBP9.62□□□□□ -0.87
LIMD1-203ENST00000465039 RPS20P60866 119 aaKnown RBP9.62□□□□□ -0.87
LIMD1-203ENST00000465039 NHLRC2Q8NBF2 726 aa9.62□□□□□ -0.87
LIMD1-203ENST00000465039 PARLQ9H300 379 aa9.62□□□□□ -0.87
LIMD1-203ENST00000465039 PRO0255Q9UI72 69 aa9.62□□□□□ -0.87
LIMD1-203ENST00000465039 LYSTQ99698 3801 aa9.61□□□□□ -0.87
LIMD1-203ENST00000465039 XKRY2A2RUG3 117 aa9.61□□□□□ -0.87
LIMD1-203ENST00000465039 C19orf71A6NCJ1 209 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms