RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 DOK5Q9P104 306 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 COL7A1Q02388 2944 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 IGLV11-55A0A075B6I3 123 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 IZUMO1RA6ND01 250 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 KRBOX1C9JBD0 128 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 H3BUA1 57 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 GABARAPH6UMI1 98 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 IFNA21P01568 189 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 IGKV1-5P01602 117 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 P0C879 139 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 OR13C7P0DN81 318 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 PIGPP57054 158 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 ATP5G2Q06055 141 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 TMEM183BQ1AE95 376 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 SCGB2B2Q4G0G5 96 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 SPINK9Q5DT21 86 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 CENPWQ5EE01 88 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 RNASE10Q5GAN6 216 aaKnown RBP2.81□□□□□ -1.96
UBR4-209ENST00000465036 FAM222AQ5U5X8 452 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 NEGR1Q7Z3B1 354 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 TMEM144Q7Z5S9 345 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 PRNTQ86SH4 94 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 TMEM183AQ8IXX5 376 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 TMEM229BQ8NBD8 167 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 LHFPL5Q8TAF8 219 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 VSTM2AQ8TAG5 236 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 SMIM4Q8WVI0 70 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 USMG5Q96IX5 58 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 C18orf15Q96N68 181 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 SPIN2AQ99865 258 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 SPIN2BQ9BPZ2 258 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 ENY2Q9NPA8 101 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 NDUFA4L2Q9NRX3 87 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 YTHDF2Q9Y5A9 579 aaKnown RBP2.81□□□□□ -1.96
UBR4-209ENST00000465036 V9GYH0 126 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 CSMD3Q7Z407 3707 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 ALMS1Q8TCU4 4167 aa2.81□□□□□ -1.96
UBR4-209ENST00000465036 TENM3Q9P273 2699 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 EPPK1P58107 5090 aaKnown RBP2.8□□□□□ -1.96
UBR4-209ENST00000465036 VPS13DQ5THJ4 4388 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 IGHV3OR16-8A0A075B7F1 116 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 C3orf85A0A1B0GTC6 90 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 FAM223BA6NKX1 122 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 GSTZ1O43708 216 aaPredicted RBP2.8□□□□□ -1.96
UBR4-209ENST00000465036 CREBL2O60519 120 aaPredicted RBP2.8□□□□□ -1.96
UBR4-209ENST00000465036 YIF1AO95070 293 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 IGLV1-51P01701 117 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 CTSDP07339 412 aaPredicted RBP2.8□□□□□ -1.96
UBR4-209ENST00000465036 OR5G3P0C626 314 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 OR5AC1P0C628 307 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 TRAPPC2P0DI81 140 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 TRAPPC2BP0DI82 140 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 CRISP2P16562 243 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 MEOX2P50222 304 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 KLK9Q2XQG4 91 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 UNQ9165/PRO28630Q6UXU0 137 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 ZNF429Q86V71 674 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 FAM223AQ8IWN6 122 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 C1orf158Q8N1D5 194 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 GDPD1Q8N9F7 314 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 OR10G4Q8NGN3 311 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 OR4A5Q8NH83 315 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 TERB2Q8NHR7 220 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 BORCS5Q969J3 196 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 FAM104AQ969W3 186 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 SFRP2Q96HF1 295 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 TMEM101Q96IK0 257 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 OR4C12Q96R67 309 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 ANAPC13Q9BS18 74 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 COMMD5Q9GZQ3 224 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 NAA60Q9H7X0 242 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 TMEM14BQ9NUH8 114 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 RSL24D1Q9UHA3 163 aaKnown RBP2.8□□□□□ -1.96
UBR4-209ENST00000465036 KLK9Q9UKQ9 250 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 LYSTQ99698 3801 aa2.8□□□□□ -1.96
UBR4-209ENST00000465036 STAB2Q8WWQ8 2551 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 DNAH10Q8IVF4 4471 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 SORL1Q92673 2214 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 OR2T8A6NH00 312 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 CRYM-AS1A6NIL9 109 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 K7EIM0 57 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 COX7A2P2O60397 106 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 AKAIN1P0CW23 69 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 DEFA4P12838 97 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 ETV6P41212 452 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 INSL3P51460 131 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 AKR1C2P52895 323 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 HSPE1P61604 102 aaKnown RBP2.79□□□□□ -1.96
UBR4-209ENST00000465036 DAD1P61803 113 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 SUPT4H1P63272 117 aaKnown RBP2.79□□□□□ -1.96
UBR4-209ENST00000465036 MRPS10P82664 201 aaKnown RBP2.79□□□□□ -1.96
UBR4-209ENST00000465036 PRCDQ00LT1 54 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 SSBP1Q04837 148 aaKnown RBP2.79□□□□□ -1.96
UBR4-209ENST00000465036 ERCC8Q13216 396 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 ACOT6Q3I5F7 207 aaPredicted RBP2.79□□□□□ -1.96
UBR4-209ENST00000465036 PYDC2Q56P42 97 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 LPCAT3Q6P1A2 487 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 SBSPONQ8IVN8 264 aa2.79□□□□□ -1.96
UBR4-209ENST00000465036 C20orf203Q8NBC4 194 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms