RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 WDR61Q9GZS3 305 aaKnown RBP9.73□□□□□ -0.85
MCF2L-220ENST00000464800 KCNIP2Q9NS61 270 aa9.73□□□□□ -0.85
MCF2L-220ENST00000464800 OR5AC2Q9NZP5 309 aa9.73□□□□□ -0.85
MCF2L-220ENST00000464800 M0R2P5 195 aa9.72□□□□□ -0.85
MCF2L-220ENST00000464800 LRRC37A5PQ49AS3 106 aa9.72□□□□□ -0.85
MCF2L-220ENST00000464800 OR10J3Q5JRS4 329 aa9.72□□□□□ -0.85
MCF2L-220ENST00000464800 LINC00299Q6ZSB3 139 aa9.72□□□□□ -0.85
MCF2L-220ENST00000464800 NAGKQ9UJ70 344 aa9.72□□□□□ -0.85
MCF2L-220ENST00000464800 C17orf112F2Z3M2 114 aa9.71□□□□□ -0.86
MCF2L-220ENST00000464800 H0YIZ8 118 aa9.71□□□□□ -0.86
MCF2L-220ENST00000464800 IGHV3-30P01768 117 aa9.71□□□□□ -0.86
MCF2L-220ENST00000464800 IGHV3-33P01772 117 aa9.71□□□□□ -0.86
MCF2L-220ENST00000464800 IGHV3-30-3P0DP02 117 aa9.71□□□□□ -0.86
MCF2L-220ENST00000464800 IGHV3-30-5P0DP03 117 aa9.71□□□□□ -0.86
MCF2L-220ENST00000464800 GATA1P15976 413 aaPredicted RBP9.71□□□□□ -0.86
MCF2L-220ENST00000464800 S100ZQ8WXG8 99 aa9.71□□□□□ -0.86
MCF2L-220ENST00000464800 NMES1Q9C002 83 aa9.71□□□□□ -0.86
MCF2L-220ENST00000464800 IGHV3-16A0A0C4DH30 117 aa9.7□□□□□ -0.86
MCF2L-220ENST00000464800 DIRC3C9JPN6 131 aa9.7□□□□□ -0.86
MCF2L-220ENST00000464800 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
MCF2L-220ENST00000464800 UBE2L3P68036 154 aaKnown RBP9.7□□□□□ -0.86
MCF2L-220ENST00000464800 ASAH1Q13510 395 aa9.7□□□□□ -0.86
MCF2L-220ENST00000464800 LAGE3Q14657 143 aa9.7□□□□□ -0.86
MCF2L-220ENST00000464800 TDRG1Q3Y452 100 aa9.7□□□□□ -0.86
MCF2L-220ENST00000464800 TM2D2Q9BX73 214 aa9.7□□□□□ -0.86
MCF2L-220ENST00000464800 LENEPQ9Y5L5 61 aa9.7□□□□□ -0.86
MCF2L-220ENST00000464800 CYCSP99999 105 aaKnown RBP9.69□□□□□ -0.86
MCF2L-220ENST00000464800 HYLS1Q96M11 299 aa9.69□□□□□ -0.86
MCF2L-220ENST00000464800 ATP5SQ99766 215 aa9.69□□□□□ -0.86
MCF2L-220ENST00000464800 FBLL1A6NHQ2 334 aaKnown RBP9.68□□□□□ -0.86
MCF2L-220ENST00000464800 WFDC2Q14508 124 aa9.68□□□□□ -0.86
MCF2L-220ENST00000464800 FFAR4Q5NUL3 377 aa9.68□□□□□ -0.86
MCF2L-220ENST00000464800 LELP1Q5T871 98 aa9.68□□□□□ -0.86
MCF2L-220ENST00000464800 SLC25A29Q8N8R3 303 aa9.68□□□□□ -0.86
MCF2L-220ENST00000464800 PRADC1Q9BSG0 188 aa9.68□□□□□ -0.86
MCF2L-220ENST00000464800 GNRH2O43555 120 aa9.67□□□□□ -0.86
MCF2L-220ENST00000464800 TAS2R45P59539 299 aa9.67□□□□□ -0.86
MCF2L-220ENST00000464800 RHOHQ15669 191 aa9.67□□□□□ -0.86
MCF2L-220ENST00000464800 KHDC3LQ587J8 217 aa9.67□□□□□ -0.86
MCF2L-220ENST00000464800 ENKURQ8TC29 256 aa9.67□□□□□ -0.86
MCF2L-220ENST00000464800 TMED6Q8WW62 240 aa9.67□□□□□ -0.86
MCF2L-220ENST00000464800 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-220ENST00000464800 PGPA6NDG6 321 aa9.66□□□□□ -0.86
MCF2L-220ENST00000464800 LECT2O14960 151 aa9.66□□□□□ -0.86
MCF2L-220ENST00000464800 EIF3GO75821 320 aaKnown RBP eCLIP9.66□□□□□ -0.86
MCF2L-220ENST00000464800 TYMSP04818 313 aa9.66□□□□□ -0.86
MCF2L-220ENST00000464800 H2BFSP57053 126 aa9.66□□□□□ -0.86
MCF2L-220ENST00000464800 SCXQ7RTU7 201 aa9.66□□□□□ -0.86
MCF2L-220ENST00000464800 PPP1R1CQ8WVI7 109 aa9.66□□□□□ -0.86
MCF2L-220ENST00000464800 SDF2L1Q9HCN8 221 aa9.66□□□□□ -0.86
MCF2L-220ENST00000464800 OTORQ9NRC9 128 aa9.66□□□□□ -0.86
MCF2L-220ENST00000464800 PLA2G2DQ9UNK4 145 aa9.66□□□□□ -0.86
MCF2L-220ENST00000464800 TRAV21A0A0B4J279 112 aa9.65□□□□□ -0.86
MCF2L-220ENST00000464800 TRBV6-4A0A1B0GX49 114 aa9.65□□□□□ -0.86
MCF2L-220ENST00000464800 OXTP01178 125 aa9.65□□□□□ -0.86
MCF2L-220ENST00000464800 CMTM2Q8TAZ6 248 aa9.65□□□□□ -0.86
MCF2L-220ENST00000464800 SCGB1C1Q8TD33 95 aa9.65□□□□□ -0.86
MCF2L-220ENST00000464800 GTSF1LQ9H1H1 148 aa9.65□□□□□ -0.86
MCF2L-220ENST00000464800 MBD2Q9UBB5 411 aa9.65□□□□□ -0.86
MCF2L-220ENST00000464800 RPH3ALQ9UNE2 315 aa9.65□□□□□ -0.86
MCF2L-220ENST00000464800 HSPB11Q9Y547 144 aa9.65□□□□□ -0.86
MCF2L-220ENST00000464800 TRAV8-3A0A0A6YYJ7 113 aa9.64□□□□□ -0.87
MCF2L-220ENST00000464800 CIDEAO60543 219 aa9.64□□□□□ -0.87
MCF2L-220ENST00000464800 FAM74A1Q5RGS3 127 aa9.64□□□□□ -0.87
MCF2L-220ENST00000464800 GOLT1AQ6ZVE7 132 aa9.64□□□□□ -0.87
MCF2L-220ENST00000464800 TVP23CQ96ET8 276 aa9.64□□□□□ -0.87
MCF2L-220ENST00000464800 KCNS1Q96KK3 526 aa9.64□□□□□ -0.87
MCF2L-220ENST00000464800 SMIM3Q9BZL3 60 aa9.64□□□□□ -0.87
MCF2L-220ENST00000464800 F6UZH7 168 aa9.63□□□□□ -0.87
MCF2L-220ENST00000464800 INMT-MINDY4F8WBC2 141 aa9.63□□□□□ -0.87
MCF2L-220ENST00000464800 UPK1BO75841 260 aa9.63□□□□□ -0.87
MCF2L-220ENST00000464800 MPC2O95563 127 aa9.63□□□□□ -0.87
MCF2L-220ENST00000464800 RPL12P30050 165 aaKnown RBP9.63□□□□□ -0.87
MCF2L-220ENST00000464800 ZNF876PQ49A33 203 aa9.63□□□□□ -0.87
MCF2L-220ENST00000464800 LINC01620Q4KN68 170 aa9.63□□□□□ -0.87
MCF2L-220ENST00000464800 CFAP126Q5VTH2 177 aa9.63□□□□□ -0.87
MCF2L-220ENST00000464800 Q8N3U1 123 aa9.63□□□□□ -0.87
MCF2L-220ENST00000464800 ATP6V0E2Q8NHE4 81 aa9.63□□□□□ -0.87
MCF2L-220ENST00000464800 ASB13Q8WXK3 278 aa9.63□□□□□ -0.87
MCF2L-220ENST00000464800 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
MCF2L-220ENST00000464800 TRAV8-1A0A0A6YYK1 113 aa9.62□□□□□ -0.87
MCF2L-220ENST00000464800 IGHV3-73A0A0B4J1V6 119 aa9.62□□□□□ -0.87
MCF2L-220ENST00000464800 RS1O15537 224 aa9.62□□□□□ -0.87
MCF2L-220ENST00000464800 KRTAP10-4P60372 401 aaPredicted RBP9.62□□□□□ -0.87
MCF2L-220ENST00000464800 IFITM3Q01628 133 aa9.62□□□□□ -0.87
MCF2L-220ENST00000464800 TOR2AQ5JU69 321 aa9.62□□□□□ -0.87
MCF2L-220ENST00000464800 ARL6IP6Q8N6S5 226 aa9.62□□□□□ -0.87
MCF2L-220ENST00000464800 DNAH8Q96JB1 4490 aa9.61□□□□□ -0.87
MCF2L-220ENST00000464800 A0A1W2PPV4 95 aa9.61□□□□□ -0.87
MCF2L-220ENST00000464800 PET100P0DJ07 73 aa9.61□□□□□ -0.87
MCF2L-220ENST00000464800 MGST1P10620 155 aaKnown RBP9.61□□□□□ -0.87
MCF2L-220ENST00000464800 ACOT6Q3I5F7 207 aaPredicted RBP9.61□□□□□ -0.87
MCF2L-220ENST00000464800 PQLC2Q6ZP29 291 aa9.61□□□□□ -0.87
MCF2L-220ENST00000464800 CHAC1Q9BUX1 264 aa9.61□□□□□ -0.87
MCF2L-220ENST00000464800 SH3BGRL3Q9H299 93 aa9.61□□□□□ -0.87
MCF2L-220ENST00000464800 WFDC1Q9HC57 220 aa9.61□□□□□ -0.87
MCF2L-220ENST00000464800 COX11Q9Y6N1 276 aa9.61□□□□□ -0.87
MCF2L-220ENST00000464800 RBFOX3A6NFN3 312 aa9.6□□□□□ -0.87
MCF2L-220ENST00000464800 GGTLC3B5MD39 225 aa9.6□□□□□ -0.87
MCF2L-220ENST00000464800 SSNA1O43805 119 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms