RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 TMEM191AQ9H0A3 160 aa7.52□□□□□ -1.21
PTPRD-207ENST00000463477 TRAV8-2A0A0B4J237 113 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 IGHV3-35A0A0C4DH35 117 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 PPBPP02775 128 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 CD28P10747 220 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 ZNF138P52744 262 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 C8orf86Q6ZUL3 223 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 NDUFA11Q86Y39 141 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 C11orf44Q8N8P7 122 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 OR10AG1Q8NH19 301 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 Q8TAT8 98 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 ST20Q9HBF5 79 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 LAMTOR2Q9Y2Q5 125 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 MRPS16Q9Y3D3 137 aaKnown RBP7.51□□□□□ -1.21
PTPRD-207ENST00000463477 OR4C46A6NHA9 309 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 ARL3P36405 182 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 FA2HQ7L5A8 372 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 PRELID3AQ96N28 172 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 CITED2Q99967 270 aaPredicted RBP7.51□□□□□ -1.21
PTPRD-207ENST00000463477 AGPAT4-IT1Q9H0P7 198 aa7.51□□□□□ -1.21
PTPRD-207ENST00000463477 CMYA5Q8N3K9 4069 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 IGHV3OR16-8A0A075B7F1 116 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 TMEM213A2RRL7 107 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 LINC01546A6NGU7 62 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 PRAC2D3DTV9 90 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 D6R8Y8 96 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
PTPRD-207ENST00000463477 MRPL51Q4U2R6 128 aaKnown RBP7.5□□□□□ -1.21
PTPRD-207ENST00000463477 TCTEX1D4Q5JR98 221 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 TMEM78Q5T7P6 136 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 LINC01545Q5VT33 79 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 IGFL4Q6B9Z1 124 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 PRSS3P2Q8NHM4 247 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 TPPP3Q9BW30 176 aa7.5□□□□□ -1.21
PTPRD-207ENST00000463477 TMSB15BA0A087X1C1 80 aa7.49□□□□□ -1.21
PTPRD-207ENST00000463477 A0A0G2JLM5 398 aa7.49□□□□□ -1.21
PTPRD-207ENST00000463477 ADARB2-AS1A8MUL3 147 aa7.49□□□□□ -1.21
PTPRD-207ENST00000463477 IGLV1-40P01703 118 aa7.49□□□□□ -1.21
PTPRD-207ENST00000463477 IGLL1P15814 213 aa7.49□□□□□ -1.21
PTPRD-207ENST00000463477 HNRNPA3P51991 378 aaKnown RBP7.49□□□□□ -1.21
PTPRD-207ENST00000463477 ERCC8Q13216 396 aa7.49□□□□□ -1.21
PTPRD-207ENST00000463477 AMN1Q8IY45 258 aa7.49□□□□□ -1.21
PTPRD-207ENST00000463477 RNF182Q8N6D2 247 aa7.49□□□□□ -1.21
PTPRD-207ENST00000463477 OR4X2Q8NGF9 303 aa7.49□□□□□ -1.21
PTPRD-207ENST00000463477 MS4A6AQ9H2W1 248 aa7.49□□□□□ -1.21
PTPRD-207ENST00000463477 SIGLEC8Q9NYZ4 499 aa7.49□□□□□ -1.21
PTPRD-207ENST00000463477 TSSC4Q9Y5U2 329 aaPredicted RBP7.49□□□□□ -1.21
PTPRD-207ENST00000463477 NOTCH3Q9UM47 2321 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 IGHV4-4A0A075B6R2 117 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 TRBV7-9A0A0J9YWB2 115 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 TCAPO15273 167 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 ORM1P02763 201 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 TSPOP30536 169 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 CFHR3Q02985 330 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 TWIST1Q15672 202 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 COL5A1-AS1Q5SY13 56 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 HIST2H2BDQ6DRA6 164 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 C10orf99Q6UWK7 81 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 Q6ZN92 141 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 LINC00173Q6ZV60 143 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 DPF1Q92782 380 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 LINC00477Q96M19 166 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 LINC00527Q9UJ94 153 aa7.48□□□□□ -1.21
PTPRD-207ENST00000463477 SOCS3O14543 225 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 OVOL1O14753 267 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 CSN3P07498 182 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 CKS2P33552 79 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 NSUN5P1Q3KNT7 163 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 ATOH7Q8N100 152 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 DEFB125Q8N687 156 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 RNF185Q96GF1 192 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 A0A096LNJ9 63 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 IGKV3D-20A0A0C4DH25 116 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 IGHV3-66A0A0C4DH42 116 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 SNAI2O43623 268 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 PRB4P10163 310 aaPredicted RBP7.47□□□□□ -1.21
PTPRD-207ENST00000463477 IFI27P40305 119 aaPredicted RBP7.47□□□□□ -1.21
PTPRD-207ENST00000463477 CACNG7P62955 275 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 MAJINQ3KP22 176 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 SAMD13Q5VXD3 122 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 RNF152Q8N8N0 203 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 C16orf92Q96LL3 132 aa7.47□□□□□ -1.21
PTPRD-207ENST00000463477 NOTCH1P46531 2555 aa7.46□□□□□ -1.21
PTPRD-207ENST00000463477 PRSS47A8MTI9 375 aa7.46□□□□□ -1.22
PTPRD-207ENST00000463477 HSBP1L1C9JCN9 74 aa7.46□□□□□ -1.22
PTPRD-207ENST00000463477 K7EMT4 169 aa7.46□□□□□ -1.22
PTPRD-207ENST00000463477 ZNF207O43670 478 aaKnown RBP7.46□□□□□ -1.22
PTPRD-207ENST00000463477 HBDP02042 147 aa7.46□□□□□ -1.22
PTPRD-207ENST00000463477 ELANEP08246 267 aa7.46□□□□□ -1.22
PTPRD-207ENST00000463477 GAGE1Q13065 139 aa7.46□□□□□ -1.22
PTPRD-207ENST00000463477 FOXE3Q13461 319 aa7.46□□□□□ -1.22
PTPRD-207ENST00000463477 LGALS9BQ3B8N2 356 aa7.46□□□□□ -1.22
PTPRD-207ENST00000463477 LGALS9CQ6DKI2 356 aa7.46□□□□□ -1.22
PTPRD-207ENST00000463477 GPHB5Q86YW7 130 aa7.46□□□□□ -1.22
PTPRD-207ENST00000463477 APRG1Q8IVJ8 170 aa7.46□□□□□ -1.22
PTPRD-207ENST00000463477 IGHV3OR16-13A0A075B7E8 117 aa7.45□□□□□ -1.22
PTPRD-207ENST00000463477 IGHV3-74A0A0B4J1X5 117 aa7.45□□□□□ -1.22
PTPRD-207ENST00000463477 IGHV7-4-1A0A0J9YVY3 117 aa7.45□□□□□ -1.22
PTPRD-207ENST00000463477 NPYP01303 97 aa7.45□□□□□ -1.22
PTPRD-207ENST00000463477 UNQ9165/PRO28630Q6UXU0 137 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms