RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 IGLC1P0CG04 106 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 PYYP10082 97 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 SLURP1P55000 103 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 AMMECR1LQ6DCA0 310 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 Q86TA4 180 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 GATD1Q8NB37 220 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 OR5A1Q8NGJ0 315 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 DYNLRB2Q8TF09 96 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 FXYD5Q96DB9 178 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 DAZAP1Q96EP5 407 aaKnown RBP5.93□□□□□ -1.46
USP4-207ENST00000462673 CCDC140Q96MF4 163 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 GPR82Q96P67 336 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 CSTL1Q9H114 145 aa5.93□□□□□ -1.46
USP4-207ENST00000462673 DAZ1Q9NQZ3 744 aaKnown RBP5.93□□□□□ -1.46
USP4-207ENST00000462673 STAB1Q9NY15 2570 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 IGHV3-21A0A0B4J1V1 117 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 TRBV6-1A0A0K0K1D8 114 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 H3BRM9 83 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 K7EP34 96 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 WIPF1O43516 503 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 LTAP01374 205 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 GATA2P23769 480 aaPredicted RBP5.92□□□□□ -1.46
USP4-207ENST00000462673 CSN1S1P47710 185 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 CMC4P56277 68 aaPredicted RBP5.92□□□□□ -1.46
USP4-207ENST00000462673 HSD52Q0P140 79 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 OXLD1Q5BKU9 147 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 Q6AWC8 147 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 HIST2H2BDQ6DRA6 164 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 FA2HQ7L5A8 372 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 ERASQ7Z444 233 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 OR10AG1Q8NH19 301 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 NPIPB3Q92617 1050 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 METTL26Q96S19 204 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 NDFIP1Q9BT67 221 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 EPDR1Q9UM22 224 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 KLF12Q9Y4X4 402 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 S4R3C0 116 aa5.92□□□□□ -1.46
USP4-207ENST00000462673 TRAV5A0A0B4J249 113 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 TRAV25A0A0B4J276 109 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 GAGE12BA1L429 117 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 C19orf71A6NCJ1 209 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 GAGE10A6NGK3 116 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 C9orf118A6NHY6 69 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 NPIPB6E9PJ23 425 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 TRBV12-3P01733 135 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 SMIM17P0DL12 118 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 GNG5P63218 68 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 RIGQ13278 110 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 TMEM97Q5BJF2 176 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 SAMD5Q5TGI4 173 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 MORN5Q5VZ52 161 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 PGLYRP4Q96LB8 373 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 OTORQ9NRC9 128 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 AP5S1Q9NUS5 200 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 TP73-AS1Q9UF72 201 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 RPH3ALQ9UNE2 315 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 TENM1Q9UKZ4 2725 aa5.91□□□□□ -1.46
USP4-207ENST00000462673 A0A087X0K7 114 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 TRAV8-6A0A0B4J262 113 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 TMEM238C9JI98 176 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 IGHV3-48P01763 117 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 CSN3P07498 182 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 GP9P14770 177 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 FOXA3P55318 350 aaPredicted RBP5.9□□□□□ -1.46
USP4-207ENST00000462673 EGFEM1PQ0D2K5 195 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 MLANAQ16655 118 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 LGALS9BQ3B8N2 356 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 PSMG4Q5JS54 123 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 KPRPQ5T749 579 aaPredicted RBP5.9□□□□□ -1.46
USP4-207ENST00000462673 LGALS9CQ6DKI2 356 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 UFSP1Q6NVU6 142 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 LINC00173Q6ZV60 143 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 C2orf91Q6ZV80 131 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 LINC00305Q7Z4B0 112 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 GTSCR1Q86UQ5 136 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 FER1L6-AS1Q8NA97 138 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 OR1B1Q8NGR6 318 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 TRGV9Q99603 122 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 MLST8Q9BVC4 326 aa5.9□□□□□ -1.46
USP4-207ENST00000462673 FNDC4Q9H6D8 234 aaPredicted RBP5.9□□□□□ -1.46
USP4-207ENST00000462673 CHTOPQ9Y3Y2 248 aaKnown RBP5.9□□□□□ -1.46
USP4-207ENST00000462673 A0A1B0GUT8 65 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 G3V4G9 280 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 SIVA1O15304 175 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 IGLV1-51P01701 117 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 APOHP02749 345 aaPredicted RBP5.89□□□□□ -1.47
USP4-207ENST00000462673 TCRAP04437 139 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 SCGB1A1P11684 91 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 DEFB114Q30KQ6 69 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 PATE2Q6UY27 113 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 GTSF1Q8WW33 167 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 LINC00479Q96M42 142 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 Q9H3A6 140 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 SMPXQ9UHP9 88 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 RABAC1Q9UI14 185 aa5.89□□□□□ -1.47
USP4-207ENST00000462673 ZNF256Q9Y2P7 627 aaPredicted RBP5.89□□□□□ -1.47
USP4-207ENST00000462673 IGKV1D-37A0A075B6S9 117 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 IGHV3-35A0A0C4DH35 117 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 IGHV7-4-1A0A0J9YVY3 117 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 PGPA6NDG6 321 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms