RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 AZU1P20160 251 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 ASIPP42127 132 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 NANOS2P60321 138 aaKnown RBP4.58□□□□□ -1.68
SF3B1-206ENST00000462613 OR5I1Q13606 314 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 ZNF674Q2M3X9 581 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 LGALS9BQ3B8N2 356 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 CENPWQ5EE01 88 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 PRR27Q6MZM9 219 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 PHLDA1Q8WV24 401 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-206ENST00000462613 TVP23CQ96ET8 276 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 NOP10Q9NPE3 64 aaKnown RBP4.58□□□□□ -1.68
SF3B1-206ENST00000462613 GSN-AS1Q9NRJ2 163 aa4.58□□□□□ -1.68
SF3B1-206ENST00000462613 MUC4Q99102 2169 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 DEFB131BA0A096LNP1 70 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 TRGV1A0A0A0MS02 117 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 ZNF727A8MUV8 499 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 C9JCJ5 164 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 M0R036 132 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 TYMSP04818 313 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 ATP5G1P05496 136 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 HTN3P15516 51 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 TCTAP57738 103 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 DAZ2Q13117 558 aaKnown RBP4.57□□□□□ -1.68
SF3B1-206ENST00000462613 ZFAND6Q6FIF0 208 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 COX8CQ7Z4L0 72 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 NHLRC2Q8NBF2 726 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 ZC2HC1AQ96GY0 325 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 SMIM7Q9BQ49 75 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 PARLQ9H300 379 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 CELA1Q9UNI1 258 aa4.57□□□□□ -1.68
SF3B1-206ENST00000462613 GAGE12BA1L429 117 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 M0R2P5 195 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 SH2D1AO60880 128 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 GAGE7O76087 117 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 P01737 135 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 PRM2P04554 102 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 GAGE12FP0CL80 117 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 GAGE12GP0CL81 117 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 GAGE12IP0CL82 117 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 ZNF80P51504 273 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-206ENST00000462613 RPS20P60866 119 aaKnown RBP4.56□□□□□ -1.68
SF3B1-206ENST00000462613 C12orf74Q32Q52 190 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 LINC01559Q495D7 138 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 FAM74A3Q4VXF1 159 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 CLLU1Q5K131 121 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 CASC10Q5T4H9 136 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 CEMP1Q6PRD7 247 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-206ENST00000462613 Q6ZTC4 211 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 C11orf72Q8NBR9 251 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 SYT8Q8NBV8 401 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 PCNPQ8WW12 178 aaKnown RBP4.56□□□□□ -1.68
SF3B1-206ENST00000462613 FAM210BQ96KR6 192 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 NDUFAF3Q9BU61 184 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 DERL1Q9BUN8 251 aa4.56□□□□□ -1.68
SF3B1-206ENST00000462613 PRKDCP78527 4128 aaKnown RBP4.56□□□□□ -1.68
SF3B1-206ENST00000462613 IGHV3-16A0A0C4DH30 117 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 PLAC8L1A1L4L8 177 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 RAB19A4D1S5 217 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 IGLL5B9A064 214 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 F5H768 121 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 GNRH2O43555 120 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 CIDEAO60543 219 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 SPINK4O60575 86 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 SRP19P09132 144 aaKnown RBP4.55□□□□□ -1.68
SF3B1-206ENST00000462613 CXCL1P09341 107 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 SLAQ13239 276 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 SOHLH1Q5JUK2 328 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 Q6ZTI0 123 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 C15orf54Q8N8G6 183 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 MLST8Q9BVC4 326 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 IL36BQ9NZH7 164 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 MDFICQ9P1T7 246 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 TP53TG3Q9ULZ0 132 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 PHLDA3Q9Y5J5 127 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 LY96Q9Y6Y9 160 aa4.55□□□□□ -1.68
SF3B1-206ENST00000462613 TMSB15BA0A087X1C1 80 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 IGKV3D-20A0A0C4DH25 116 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 TRGV4A0A0C4DH28 118 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 A8MWV9 139 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 KRBOX1C9JBD0 128 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 H3BVH4 76 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 MED14OSP0DP75 135 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 CRIP1P50238 77 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 ERVFC1-1P60608 527 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 TMEM241Q24JQ0 296 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 ZNF876PQ49A33 203 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 PIK3CD-AS1Q5SR53 167 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 DNLZQ5SXM8 178 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 Q6ZQT7 251 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 ZFP82Q8N141 532 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 C15orf53Q8NAA6 179 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 OR4C5Q8NGB2 326 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 OR2D3Q8NGH3 330 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 RASL10AQ92737 203 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 BORCS7Q96B45 105 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 C18orf15Q96N68 181 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 MRPL16Q9NX20 251 aaKnown RBP4.54□□□□□ -1.68
SF3B1-206ENST00000462613 NAT8Q9UHE5 227 aa4.54□□□□□ -1.68
SF3B1-206ENST00000462613 TRBV20OR9-2A0A075B6H5 130 aa4.53□□□□□ -1.68
SF3B1-206ENST00000462613 IGHV4-4A0A075B6R2 117 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms