RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 CCL20P78556 96 aa4.07□□□□□ -1.76
VPS36-202ENST00000462289 DAZ2Q13117 558 aaKnown RBP4.07□□□□□ -1.76
VPS36-202ENST00000462289 ERCC8Q13216 396 aa4.07□□□□□ -1.76
VPS36-202ENST00000462289 TWIST1Q15672 202 aa4.07□□□□□ -1.76
VPS36-202ENST00000462289 FAM74A1Q5RGS3 127 aa4.07□□□□□ -1.76
VPS36-202ENST00000462289 CASC10Q5T4H9 136 aa4.07□□□□□ -1.76
VPS36-202ENST00000462289 ZNF493Q6ZR52 646 aa4.07□□□□□ -1.76
VPS36-202ENST00000462289 CYB561D1Q8N8Q1 229 aa4.07□□□□□ -1.76
VPS36-202ENST00000462289 TMEM263Q8WUH6 116 aaKnown RBP4.07□□□□□ -1.76
VPS36-202ENST00000462289 TXNDC17Q9BRA2 123 aa4.07□□□□□ -1.76
VPS36-202ENST00000462289 PYGO2Q9BRQ0 406 aa4.07□□□□□ -1.76
VPS36-202ENST00000462289 ALMS1Q8TCU4 4167 aa4.07□□□□□ -1.76
VPS36-202ENST00000462289 DNAH6Q9C0G6 4158 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 TRAV12-2A0A075B6T6 113 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 TRAV8-1A0A0A6YYK1 113 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 TEX48A0A1B0GUV7 120 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 C7orf71A4D174 169 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 LYRM9A8MSI8 78 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 LTAP01374 205 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 IGKV3-20P01619 116 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 AZU1P20160 251 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 CSN1S1P47710 185 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 PPT1P50897 306 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 NKX2-5P52952 324 aaPredicted RBP4.06□□□□□ -1.76
VPS36-202ENST00000462289 FGF8P55075 233 aaPredicted RBP4.06□□□□□ -1.76
VPS36-202ENST00000462289 GNG5P63218 68 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 TMEM183BQ1AE95 376 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 C12orf74Q32Q52 190 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 DNLZQ5SXM8 178 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 IBA57Q5T440 356 aaKnown RBP4.06□□□□□ -1.76
VPS36-202ENST00000462289 TMEM78Q5T7P6 136 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 Q6ZQT7 251 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 GOLT1AQ6ZVE7 132 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 Q8TAT8 98 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 FAM213BQ8TBF2 198 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 SFT2D1Q8WV19 159 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 CELA1Q9UNI1 258 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 GOLT1BQ9Y3E0 138 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 RYR3Q15413 4870 aa4.06□□□□□ -1.76
VPS36-202ENST00000462289 PEX7O00628 323 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 HBE1P02100 147 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 PRB4P10163 310 aaPredicted RBP4.05□□□□□ -1.76
VPS36-202ENST00000462289 TAGLN2P37802 199 aaKnown RBP4.05□□□□□ -1.76
VPS36-202ENST00000462289 ATP5G3P48201 142 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 ZNF80P51504 273 aaPredicted RBP4.05□□□□□ -1.76
VPS36-202ENST00000462289 FXYD7P58549 80 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 FLI1Q01543 452 aaPredicted RBP4.05□□□□□ -1.76
VPS36-202ENST00000462289 BTN1A1Q13410 526 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 RRN3P1Q2M238 152 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 TEX261Q6UWH6 196 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 Q86TA4 180 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 PTH2Q96A98 100 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 C16orf74Q96GX8 76 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 MANBALQ9NQG1 85 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 PSG8Q9UQ74 426 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 ZFP30Q9Y2G7 519 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 RYR2Q92736 4967 aa4.05□□□□□ -1.76
VPS36-202ENST00000462289 TRBV20OR9-2A0A075B6H5 130 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 TRAV12-3A0A0B4J271 114 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 LOC102723971A0A1B0GUV8 181 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 ZNF705GA8MUZ8 300 aaPredicted RBP4.04□□□□□ -1.76
VPS36-202ENST00000462289 C11orf94C9JXX5 98 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 SPINK4O60575 86 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 PAGE4O60829 102 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 IGLV2-8P01709 118 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 PRM2P04554 102 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 S100A9P06702 114 aaKnown RBP4.04□□□□□ -1.76
VPS36-202ENST00000462289 PFN1P07737 140 aaKnown RBP4.04□□□□□ -1.76
VPS36-202ENST00000462289 BCL2P10415 239 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 CRIP1P50238 77 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 TCL1AP56279 114 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 TCTAP57738 103 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
VPS36-202ENST00000462289 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
VPS36-202ENST00000462289 MEF2BQ02080 365 aaPredicted RBP4.04□□□□□ -1.76
VPS36-202ENST00000462289 ZNF674Q2M3X9 581 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 LGALS9BQ3B8N2 356 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 PIK3CD-AS1Q5SR53 167 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 SAPCD1Q5SSQ6 148 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 CEMP1Q6PRD7 247 aaPredicted RBP4.04□□□□□ -1.76
VPS36-202ENST00000462289 ALKAL2Q6UX46 152 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 TMEM183AQ8IXX5 376 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 EIF4E3Q8N5X7 224 aaKnown RBP4.04□□□□□ -1.76
VPS36-202ENST00000462289 ZNF680Q8NEM1 530 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 PRSS3P2Q8NHM4 247 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 C11orf45Q8TAV5 145 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 CMTM2Q8TAZ6 248 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 SMIM12Q96EX1 92 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 FMC1Q96HJ9 113 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 LINC00479Q96M42 142 aa4.04□□□□□ -1.76
VPS36-202ENST00000462289 IGHV1OR15-1A0A075B7D0 117 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 TRAV21A0A0B4J279 112 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 IGHV3-16A0A0C4DH30 117 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 NUPR2A6NF83 97 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 TMEM250H0YL14 139 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 K7EQM0 130 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 DEFB4AO15263 64 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 GPX1P07203 203 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 CXCL1P09341 107 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 SPART-AS1P0CW21 52 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms