RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 KCNS1Q96KK3 526 aa12.1□□□□□ -0.47
SSB-206ENST00000461708 SMIM3Q9BZL3 60 aa12.1□□□□□ -0.47
SSB-206ENST00000461708 NAGKQ9UJ70 344 aa12.1□□□□□ -0.47
SSB-206ENST00000461708 BOLA1Q9Y3E2 137 aa12.1□□□□□ -0.47
SSB-206ENST00000461708 DEFA1P59665 94 aa12.09□□□□□ -0.47
SSB-206ENST00000461708 DEFA3P59666 94 aa12.09□□□□□ -0.47
SSB-206ENST00000461708 GOLT1AQ6ZVE7 132 aa12.09□□□□□ -0.47
SSB-206ENST00000461708 SDF2L1Q9HCN8 221 aa12.09□□□□□ -0.47
SSB-206ENST00000461708 TREM1Q9NP99 234 aa12.09□□□□□ -0.47
SSB-206ENST00000461708 SERTM2A0A1B0GWG4 89 aa12.08□□□□□ -0.48
SSB-206ENST00000461708 EPM2AB3EWF7 344 aa12.08□□□□□ -0.48
SSB-206ENST00000461708 GNRH2O43555 120 aa12.08□□□□□ -0.48
SSB-206ENST00000461708 CIDEAO60543 219 aa12.08□□□□□ -0.48
SSB-206ENST00000461708 TVP23CQ96ET8 276 aa12.08□□□□□ -0.48
SSB-206ENST00000461708 WFDC1Q9HC57 220 aa12.08□□□□□ -0.48
SSB-206ENST00000461708 TYMSP04818 313 aa12.07□□□□□ -0.48
SSB-206ENST00000461708 GATA1P15976 413 aaPredicted RBP12.07□□□□□ -0.48
SSB-206ENST00000461708 XGP55808 180 aa12.07□□□□□ -0.48
SSB-206ENST00000461708 RPH3ALQ9UNE2 315 aa12.07□□□□□ -0.48
SSB-206ENST00000461708 SRRM2Q9UQ35 2752 aaKnown RBP12.07□□□□□ -0.48
SSB-206ENST00000461708 TRAV8-1A0A0A6YYK1 113 aa12.06□□□□□ -0.48
SSB-206ENST00000461708 A6NHS1 94 aa12.06□□□□□ -0.48
SSB-206ENST00000461708 CRYGDP07320 174 aa12.06□□□□□ -0.48
SSB-206ENST00000461708 RAB2AP61019 212 aa12.06□□□□□ -0.48
SSB-206ENST00000461708 OR10G9Q8NGN4 311 aa12.06□□□□□ -0.48
SSB-206ENST00000461708 OR10G7Q8NGN6 311 aa12.06□□□□□ -0.48
SSB-206ENST00000461708 ASB13Q8WXK3 278 aa12.06□□□□□ -0.48
SSB-206ENST00000461708 EIF3GO75821 320 aaKnown RBP eCLIP12.05□□□□□ -0.484e-7■■□□□ 13
SSB-206ENST00000461708 PFN1P07737 140 aaKnown RBP12.05□□□□□ -0.48
SSB-206ENST00000461708 OR2G3Q8NGZ4 309 aa12.05□□□□□ -0.48
SSB-206ENST00000461708 SUN5Q8TC36 379 aa12.05□□□□□ -0.48
SSB-206ENST00000461708 NDFIP1Q9BT67 221 aa12.05□□□□□ -0.48
SSB-206ENST00000461708 IGHV3-38A0A0C4DH36 116 aa12.04□□□□□ -0.48
SSB-206ENST00000461708 FBLL1A6NHQ2 334 aaKnown RBP12.04□□□□□ -0.48
SSB-206ENST00000461708 F6UZH7 168 aa12.04□□□□□ -0.48
SSB-206ENST00000461708 KRTAP10-1P60331 282 aa12.04□□□□□ -0.48
SSB-206ENST00000461708 LINC01556Q5JQF7 62 aa12.04□□□□□ -0.48
SSB-206ENST00000461708 C5orf17Q8NAS9 161 aa12.04□□□□□ -0.48
SSB-206ENST00000461708 PTH2Q96A98 100 aa12.04□□□□□ -0.48
SSB-206ENST00000461708 TAAR5O14804 337 aa12.03□□□□□ -0.48
SSB-206ENST00000461708 STAG3L2P0CL84 134 aa12.03□□□□□ -0.48
SSB-206ENST00000461708 STAG3L3P0CL85 134 aa12.03□□□□□ -0.48
SSB-206ENST00000461708 ARL14EPLP0DKL9 152 aa12.03□□□□□ -0.48
SSB-206ENST00000461708 FUSP35637 526 aaKnown RBP eCLIP12.03□□□□□ -0.48
SSB-206ENST00000461708 GNG5P63218 68 aa12.03□□□□□ -0.48
SSB-206ENST00000461708 ZNF876PQ49A33 203 aa12.03□□□□□ -0.48
SSB-206ENST00000461708 NHLRC2Q8NBF2 726 aa12.03□□□□□ -0.48
SSB-206ENST00000461708 PSMG3Q9BT73 122 aaPredicted RBP12.03□□□□□ -0.48
SSB-206ENST00000461708 LOC100131303A0A0U1RQF7 123 aa12.02□□□□□ -0.49
SSB-206ENST00000461708 TRBV6-4A0A1B0GX49 114 aa12.02□□□□□ -0.49
SSB-206ENST00000461708 K7EQM0 130 aa12.02□□□□□ -0.49
SSB-206ENST00000461708 RS1O15537 224 aa12.02□□□□□ -0.49
SSB-206ENST00000461708 TCRAP04437 139 aa12.02□□□□□ -0.49
SSB-206ENST00000461708 CDC34P49427 236 aaPredicted RBP12.02□□□□□ -0.49
SSB-206ENST00000461708 PPT1P50897 306 aa12.02□□□□□ -0.49
SSB-206ENST00000461708 SLC25A29Q8N8R3 303 aa12.02□□□□□ -0.49
SSB-206ENST00000461708 PRADC1Q9BSG0 188 aa12.02□□□□□ -0.49
SSB-206ENST00000461708 FAT1Q14517 4588 aa12.01□□□□□ -0.49
SSB-206ENST00000461708 TRAV8-6A0A0B4J262 113 aa12.01□□□□□ -0.49
SSB-206ENST00000461708 IBA57-AS1B1ANH7 110 aa12.01□□□□□ -0.49
SSB-206ENST00000461708 MBP02144 154 aa12.01□□□□□ -0.49
SSB-206ENST00000461708 GCSHP23434 173 aa12.01□□□□□ -0.49
SSB-206ENST00000461708 SERF2P84101 59 aa12.01□□□□□ -0.49
SSB-206ENST00000461708 RHOHQ15669 191 aa12.01□□□□□ -0.49
SSB-206ENST00000461708 CFAP126Q5VTH2 177 aa12.01□□□□□ -0.49
SSB-206ENST00000461708 NTN5Q8WTR8 489 aaPredicted RBP12.01□□□□□ -0.49
SSB-206ENST00000461708 C9orf85Q96MD7 179 aa12.01□□□□□ -0.49
SSB-206ENST00000461708 HMGB3O15347 200 aaKnown RBP12□□□□□ -0.49
SSB-206ENST00000461708 GCHFRP30047 84 aa12□□□□□ -0.49
SSB-206ENST00000461708 FRZBQ92765 325 aa12□□□□□ -0.49
SSB-206ENST00000461708 RAB24Q969Q5 203 aa12□□□□□ -0.49
SSB-206ENST00000461708 C11orf21Q9P2W6 132 aa12□□□□□ -0.49
SSB-206ENST00000461708 LRCOL1A6NCL2 159 aa11.99□□□□□ -0.49
SSB-206ENST00000461708 IGLV2-11P01706 119 aa11.99□□□□□ -0.49
SSB-206ENST00000461708 ZNF80P51504 273 aaPredicted RBP11.99□□□□□ -0.49
SSB-206ENST00000461708 AQP10Q96PS8 301 aa11.99□□□□□ -0.49
SSB-206ENST00000461708 TMEM167BQ9NRX6 74 aa11.99□□□□□ -0.49
SSB-206ENST00000461708 PSG8Q9UQ74 426 aa11.99□□□□□ -0.49
SSB-206ENST00000461708 HERC1Q15751 4861 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 PSCAO43653 123 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 GCGP01275 180 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 INAFM2P0DMQ5 153 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 MGST1P10620 155 aaKnown RBP11.98□□□□□ -0.49
SSB-206ENST00000461708 FLI1Q01543 452 aaPredicted RBP11.98□□□□□ -0.49
SSB-206ENST00000461708 ZFP69Q49AA0 526 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 SMUG1Q53HV7 270 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 PIK3CD-AS1Q5SR53 167 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 SAPCD1Q5SSQ6 148 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 LELP1Q5T871 98 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 DPPA3Q6W0C5 159 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 TMEM75Q8N9X5 138 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 HSD17B11Q8NBQ5 300 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 SGK494Q96LW2 274 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 EPDR1Q9UM22 224 aa11.98□□□□□ -0.49
SSB-206ENST00000461708 FLG2Q5D862 2391 aaPredicted RBP11.97□□□□□ -0.49
SSB-206ENST00000461708 CXorf1O96002 111 aa11.97□□□□□ -0.49
SSB-206ENST00000461708 ATP6V0CP27449 155 aa11.97□□□□□ -0.49
SSB-206ENST00000461708 Q5VSD8 79 aa11.97□□□□□ -0.49
SSB-206ENST00000461708 CYB561D1Q8N8Q1 229 aa11.97□□□□□ -0.49
SSB-206ENST00000461708 TMEM70Q9BUB7 260 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms