RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 Q6ZRG5 221 aa3.31□□□□□ -1.88
BRCA1-206ENST00000461574 LINC00469Q8N7U9 141 aa3.31□□□□□ -1.88
BRCA1-206ENST00000461574 OR4C5Q8NGB2 326 aa3.31□□□□□ -1.88
BRCA1-206ENST00000461574 OR10G4Q8NGN3 311 aa3.31□□□□□ -1.88
BRCA1-206ENST00000461574 ATP6V0E2Q8NHE4 81 aa3.31□□□□□ -1.88
BRCA1-206ENST00000461574 CIRBP-AS1Q8TBR5 109 aa3.31□□□□□ -1.88
BRCA1-206ENST00000461574 SMIM4Q8WVI0 70 aa3.31□□□□□ -1.88
BRCA1-206ENST00000461574 LINC00477Q96M19 166 aa3.31□□□□□ -1.88
BRCA1-206ENST00000461574 BCL7BQ9BQE9 202 aa3.31□□□□□ -1.88
BRCA1-206ENST00000461574 AAMDCQ9H7C9 122 aa3.31□□□□□ -1.88
BRCA1-206ENST00000461574 TIMM9Q9Y5J7 89 aa3.31□□□□□ -1.88
BRCA1-206ENST00000461574 IGKV2-40A0A087WW87 121 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-206ENST00000461574 TRAV8-3A0A0A6YYJ7 113 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 TRAV4A0A0B4J268 109 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 IGHV3-16A0A0C4DH30 117 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 H0Y8G0 127 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 K7EPK0 472 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 IGKV2D-40P01614 121 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-206ENST00000461574 IGLV2-11P01706 119 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 PFN1P07737 140 aaKnown RBP3.3□□□□□ -1.88
BRCA1-206ENST00000461574 FAUP35544 74 aaKnown RBP3.3□□□□□ -1.88
BRCA1-206ENST00000461574 TAGLN2P37802 199 aaKnown RBP3.3□□□□□ -1.88
BRCA1-206ENST00000461574 KRTAP10-4P60372 401 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-206ENST00000461574 POLR2GP62487 172 aaKnown RBP eCLIP3.3□□□□□ -1.88
BRCA1-206ENST00000461574 RAB31Q13636 194 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 TMEM128Q5BJH2 165 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 FAM122CQ6P4D5 195 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 FAM159AQ6UWV7 190 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 RAB2BQ8WUD1 216 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 BAALCQ8WXS3 180 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 RMI2Q96E14 147 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 MRPL53Q96EL3 112 aaKnown RBP3.3□□□□□ -1.88
BRCA1-206ENST00000461574 PFDN5Q99471 154 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 SOSTQ9BQB4 213 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 PRADC1Q9BSG0 188 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 FUNDC2Q9BWH2 189 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 SLC39A9Q9NUM3 307 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 NAGKQ9UJ70 344 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 RPH3ALQ9UNE2 315 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 PRELID1Q9Y255 219 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 URGCP-MRPS24S4R325 110 aa3.3□□□□□ -1.88
BRCA1-206ENST00000461574 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 A0A087WXM4 84 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 ANKRD20A5PA0PJZ0 165 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 FBLL1A6NHQ2 334 aaKnown RBP3.29□□□□□ -1.88
BRCA1-206ENST00000461574 GGTLC3B5MD39 225 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 FNDC10F2Z333 226 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 ZNF253O75346 499 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 NMBP08949 121 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 CRISP2P16562 243 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 RHOHQ15669 191 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 TMEM183BQ1AE95 376 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 PRR9Q5T870 116 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 LELP1Q5T871 98 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 TMEM183AQ8IXX5 376 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 C12orf45Q8N5I9 185 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-206ENST00000461574 Q8N976 141 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 OR1L4Q8NGR5 311 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 MCFD2Q8NI22 146 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 Q8TAT8 98 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 TPPP3Q9BW30 176 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 AGPAT4-IT1Q9H0P7 198 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 SH3BGRL3Q9H299 93 aa3.29□□□□□ -1.88
BRCA1-206ENST00000461574 GPN1Q9HCN4 374 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-206ENST00000461574 TRBV19A0A075B6N1 114 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 TRAV8-1A0A0A6YYK1 113 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 C5orf51A6NDU8 294 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 F8WDY8 70 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 M0R2P5 195 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 HNRNPA3P51991 378 aaKnown RBP3.28□□□□□ -1.88
BRCA1-206ENST00000461574 ZNF138P52744 262 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 UBE2MP61081 183 aaKnown RBP3.28□□□□□ -1.88
BRCA1-206ENST00000461574 PPP1R1AQ13522 171 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 PDE6HQ13956 83 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 VWC2Q2TAL6 325 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 FFAR4Q5NUL3 377 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 Q6ZQT7 251 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 EXOC3-AS1Q8N2X6 119 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 ZFAND2AQ8N6M9 145 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 HSD17B11Q8NBQ5 300 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 RASL10AQ92737 203 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 DIRAS2Q96HU8 199 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 FAM19A4Q96LR4 140 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 MGST2Q99735 147 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 ATP5SQ99766 215 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 GTSF1LQ9H1H1 148 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 OR51M1Q9H341 326 aa3.28□□□□□ -1.88
BRCA1-206ENST00000461574 RSL24D1Q9UHA3 163 aaKnown RBP3.28□□□□□ -1.88
BRCA1-206ENST00000461574 A0A0D9SG52 128 aa3.27□□□□□ -1.89
BRCA1-206ENST00000461574 CTDSPLO15194 276 aa3.27□□□□□ -1.89
BRCA1-206ENST00000461574 SFT2D2O95562 160 aa3.27□□□□□ -1.89
BRCA1-206ENST00000461574 ATP6V1G2O95670 118 aa3.27□□□□□ -1.89
BRCA1-206ENST00000461574 MBPP02686 304 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-206ENST00000461574 OR10J4P0C629 311 aa3.27□□□□□ -1.89
BRCA1-206ENST00000461574 SEC11BP0C7V7 166 aa3.27□□□□□ -1.89
BRCA1-206ENST00000461574 PYYP10082 97 aa3.27□□□□□ -1.89
BRCA1-206ENST00000461574 GATA1P15976 413 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-206ENST00000461574 MT3P25713 68 aa3.27□□□□□ -1.89
BRCA1-206ENST00000461574 CSN1S1P47710 185 aa3.27□□□□□ -1.89
BRCA1-206ENST00000461574 BCAP31P51572 246 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms