RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 R4GMQ9 66 aa1.53□□□□□ -2.16
CLK1-206ENST00000461326 ANK2Q01484 3957 aa1.53□□□□□ -2.17
CLK1-206ENST00000461326 TEP1Q99973 2627 aaKnown RBP1.53□□□□□ -2.17
CLK1-206ENST00000461326 CCDC168Q8NDH2 2452 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 CREBBPQ92793 2442 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 PLCE1Q9P212 2302 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 USF3Q68DE3 2245 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 NSD1Q96L73 2696 aaPredicted RBP1.52□□□□□ -2.17
CLK1-206ENST00000461326 TRAV7A0A075B6U4 112 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 TMSB15BA0A087X1C1 80 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 A0A096LNT2 108 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 PNMA8CA0A1B0GUJ8 204 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 LOC107986453A0A1B0GWG9 222 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 B4DSR2 109 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 F8W036 122 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 H7C2G1 150 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 TFF1P04155 84 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 S100A6P06703 90 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 GPX1P07203 203 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 NFYAP23511 347 aaPredicted RBP1.52□□□□□ -2.17
CLK1-206ENST00000461326 SRP14P37108 136 aaKnown RBP1.52□□□□□ -2.17
CLK1-206ENST00000461326 KRTAP12-1P59990 96 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 RAB14P61106 215 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 SNRPGP62308 76 aaKnown RBP1.52□□□□□ -2.17
CLK1-206ENST00000461326 SNCBQ16143 134 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 KRTAP21-3Q3LHN1 58 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 KRTAP13-4Q3LI77 160 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 TMEM244Q5VVB8 128 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 TMEM42Q69YG0 159 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 ZNF826PQ6ZT77 177 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 C8orf59Q8N0T1 100 aaPredicted RBP1.52□□□□□ -2.17
CLK1-206ENST00000461326 STX19Q8N4C7 294 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 ZNF676Q8N7Q3 588 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 DEFB108BQ8NET1 73 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 OR8B3Q8NGG8 313 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 OR51A4Q8NGJ6 313 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 H1FXQ92522 213 aaKnown RBP1.52□□□□□ -2.17
CLK1-206ENST00000461326 IMMP2LQ96T52 175 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 TIMM21Q9BVV7 248 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 RTL8AQ9BWD3 113 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 CHST6Q9GZX3 395 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 NOP16Q9Y3C1 178 aaKnown RBP1.52□□□□□ -2.17
CLK1-206ENST00000461326 MPC1Q9Y5U8 109 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 V9GYS6 101 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 SPG11Q96JI7 2443 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 ROS1P08922 2347 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 KIAA2026Q5HYC2 2103 aa1.52□□□□□ -2.17
CLK1-206ENST00000461326 ANK3Q12955 4377 aaKnown RBP1.51□□□□□ -2.17
CLK1-206ENST00000461326 SETD2Q9BYW2 2564 aaPredicted RBP1.51□□□□□ -2.17
CLK1-206ENST00000461326 MEIKINA0A087WXM9 373 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 TRAV38-1A0A0B4J264 116 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 IRGMA1A4Y4 181 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 EFCAB10A6NFE3 127 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 RFPL4AA6NLU0 287 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 TMEM210A6NLX4 147 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 TMEM212A6NML5 194 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 RFPL4AL1F8VTS6 287 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 TRAPPC2LH3BP13 241 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 I3L521 148 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 LEPROTO15243 131 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 SULT1C4O75897 302 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 CYB5AP00167 134 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 IGLV3-1P01715 115 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 TTRP02766 147 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 MSMBP08118 114 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 RPSAP08865 295 aaKnown RBP1.51□□□□□ -2.17
CLK1-206ENST00000461326 LGALS1P09382 135 aaKnown RBP1.51□□□□□ -2.17
CLK1-206ENST00000461326 GTF2A1P52655 376 aaPredicted RBP1.51□□□□□ -2.17
CLK1-206ENST00000461326 GNG3P63215 75 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 IFITM2Q01629 132 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 GRK1Q15835 563 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 KCNJ8Q15842 424 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 ACOT6Q3I5F7 207 aaPredicted RBP1.51□□□□□ -2.17
CLK1-206ENST00000461326 TMEM155Q4W5P6 130 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 TEX36Q5VZQ5 186 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 XAF1Q6GPH4 301 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 RPL22L1Q6P5R6 122 aaKnown RBP1.51□□□□□ -2.17
CLK1-206ENST00000461326 HAGHLQ6PII5 290 aaPredicted RBP1.51□□□□□ -2.17
CLK1-206ENST00000461326 IZUMO2Q6UXV1 221 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 SLC36A1Q7Z2H8 476 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 LRRC28Q86X40 367 aaPredicted RBP1.51□□□□□ -2.17
CLK1-206ENST00000461326 ANGPTL5Q86XS5 388 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 PDZD9Q8IXQ8 264 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 C10orf126Q8N4M7 172 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 ACBD7Q8N6N7 88 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 FAM216BQ8N7L0 139 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 OR5A2Q8NGI9 324 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 OR51T1Q8NGJ9 327 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 OR10K1Q8NGX5 313 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 OR10AC1Q8NH08 325 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 OR5AK2Q8NH90 309 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 ACOT12Q8WYK0 555 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 AQP3Q92482 292 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 ADAT3Q96EY9 351 aaPredicted RBP1.51□□□□□ -2.17
CLK1-206ENST00000461326 BORCS8Q96FH0 119 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 GAFA1Q96PS6 74 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 GPER1Q99527 375 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 CCDC90BQ9GZT6 254 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 SCN3BQ9NY72 215 aa1.51□□□□□ -2.17
CLK1-206ENST00000461326 TAS2R4Q9NYW5 299 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms