RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 IGLV3-9A0A075B6K5 115 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 ETV2O00321 342 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-205ENST00000461221 FAM120AOSQ5T036 256 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 Q6ZR03 302 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 WDR86Q86TI4 376 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 AGPAT4-IT1Q9H0P7 198 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 PRB2P02812 416 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-205ENST00000461221 HIGD2BQ4VC39 106 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 KLF2Q9Y5W3 355 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-205ENST00000461221 LRRK1Q38SD2 2015 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 ADAMTS7Q9UKP4 1686 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 FAM236AA0A1B0GUQ0 79 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 FAM236BA0A1B0GV22 79 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 J3QKU1 62 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 PRR20EP86478 221 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 PRR20CP86479 221 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 PRR20DP86480 221 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 PRR20BP86481 221 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 PRR20AP86496 221 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 FOXE3Q13461 319 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 IGFL3Q6UXB1 125 aa7.07□□□□□ -1.28
BRCA1-205ENST00000461221 KAAG1Q9UBP8 84 aa7.06□□□□□ -1.28
BRCA1-205ENST00000461221 LOC285556D6RIA3 1793 aa7.06□□□□□ -1.28
BRCA1-205ENST00000461221 ARID2Q68CP9 1835 aa7.06□□□□□ -1.28
BRCA1-205ENST00000461221 PDE6GP18545 87 aa7.06□□□□□ -1.28
BRCA1-205ENST00000461221 COL4A5P29400 1685 aa7.06□□□□□ -1.28
BRCA1-205ENST00000461221 COL11A2P13942 1736 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-205ENST00000461221 PCP2Q8IVA1 136 aa7.06□□□□□ -1.28
BRCA1-205ENST00000461221 PIFOQ8TCI5 191 aa7.06□□□□□ -1.28
BRCA1-205ENST00000461221 COL5A3P25940 1745 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-205ENST00000461221 MYOFQ9NZM1 2061 aa7.06□□□□□ -1.28
BRCA1-205ENST00000461221 HOXB4P17483 251 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-205ENST00000461221 TEN1Q86WV5 123 aa7.05□□□□□ -1.28
BRCA1-205ENST00000461221 DIRC1Q969H9 104 aa7.05□□□□□ -1.28
BRCA1-205ENST00000461221 IGHV3-30P01768 117 aa7.05□□□□□ -1.28
BRCA1-205ENST00000461221 IGHV3-33P01772 117 aa7.05□□□□□ -1.28
BRCA1-205ENST00000461221 IGHV3-30-3P0DP02 117 aa7.05□□□□□ -1.28
BRCA1-205ENST00000461221 IGHV3-30-5P0DP03 117 aa7.05□□□□□ -1.28
BRCA1-205ENST00000461221 K7EN84 100 aa7.05□□□□□ -1.28
BRCA1-205ENST00000461221 TAX1BP3O14907 124 aa7.05□□□□□ -1.28
BRCA1-205ENST00000461221 TMEM61Q8N0U2 210 aa7.05□□□□□ -1.28
BRCA1-205ENST00000461221 IGLV2-23P01705 113 aa7.05□□□□□ -1.28
BRCA1-205ENST00000461221 IGLV1-44P01699 117 aa7.05□□□□□ -1.28
BRCA1-205ENST00000461221 PRR30Q53SZ7 412 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-205ENST00000461221 Q71RC1 249 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-205ENST00000461221 A4D1N5 150 aa7.04□□□□□ -1.28
BRCA1-205ENST00000461221 NCR3O14931 201 aa7.04□□□□□ -1.28
BRCA1-205ENST00000461221 TRBV12-3P01733 135 aa7.04□□□□□ -1.28
BRCA1-205ENST00000461221 GP9P14770 177 aa7.04□□□□□ -1.28
BRCA1-205ENST00000461221 K7ERS5 55 aa7.04□□□□□ -1.28
BRCA1-205ENST00000461221 PLXNA1Q9UIW2 1896 aa7.04□□□□□ -1.28
BRCA1-205ENST00000461221 NRXN2Q9P2S2 1712 aa7.04□□□□□ -1.28
BRCA1-205ENST00000461221 FREM3P0C091 2139 aa7.04□□□□□ -1.28
BRCA1-205ENST00000461221 BRCA1P38398 1863 aaKnown RBP7.04□□□□□ -1.28
BRCA1-205ENST00000461221 TAF1LQ8IZX4 1826 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 FANCD2OSQ96PS1 177 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 B9D2Q9BPU9 175 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 IGLV10-54A0A075B6I4 117 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 H3BT86 120 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 TMEM256-PLSCR3K7ERE1 68 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 DEFB112Q30KQ8 113 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 C17orf77Q96MU5 243 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 CASP8AP2Q9UKL3 1982 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 KIR2DL5BA0A0G2JN68 375 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 KIR2DL5BA0A0G2JPC4 375 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 TRBV10-2A0A0K0K1G8 114 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 F8W735 103 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-205ENST00000461221 KIR2DL5AQ8N109 375 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 HIGD1BQ9P298 99 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 H0Y9J4 135 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 FGF23Q9GZV9 251 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-205ENST00000461221 CACNA1IQ9P0X4 2223 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 A0A0J9YXV3 536 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 FHL1Q13642 323 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 ARTNQ5T4W7 220 aa7.03□□□□□ -1.28
BRCA1-205ENST00000461221 RPL39LQ96EH5 51 aaKnown RBP7.03□□□□□ -1.28
BRCA1-205ENST00000461221 NYNRINQ9P2P1 1898 aaKnown RBP7.02□□□□□ -1.28
BRCA1-205ENST00000461221 C1orf147Q96MC9 270 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-205ENST00000461221 A0A0G2JMZ2 1700 aa7.02□□□□□ -1.29
BRCA1-205ENST00000461221 LRRC37A2A6NM11 1700 aa7.02□□□□□ -1.29
BRCA1-205ENST00000461221 LGALS9O00182 355 aa7.02□□□□□ -1.29
BRCA1-205ENST00000461221 LECT2O14960 151 aa7.02□□□□□ -1.29
BRCA1-205ENST00000461221 CRYGBP07316 175 aa7.02□□□□□ -1.29
BRCA1-205ENST00000461221 MPDZO75970 2070 aa7.02□□□□□ -1.29
BRCA1-205ENST00000461221 FANCMQ8IYD8 2048 aa7.02□□□□□ -1.29
BRCA1-205ENST00000461221 DIAPH2-AS1Q14236 149 aa7.02□□□□□ -1.29
BRCA1-205ENST00000461221 APRG1Q8IVJ8 170 aa7.02□□□□□ -1.29
BRCA1-205ENST00000461221 KLK5Q9Y337 293 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-205ENST00000461221 SPTA1P02549 2419 aa7.01□□□□□ -1.29
BRCA1-205ENST00000461221 IGHV4-59P01825 116 aa7.01□□□□□ -1.29
BRCA1-205ENST00000461221 CASC2Q6XLA1 102 aa7.01□□□□□ -1.29
BRCA1-205ENST00000461221 RTTNQ86VV8 2226 aa7.01□□□□□ -1.29
BRCA1-205ENST00000461221 PDCD11Q14690 1871 aaKnown RBP7.01□□□□□ -1.29
BRCA1-205ENST00000461221 MED14OSP0DP75 135 aa7.01□□□□□ -1.29
BRCA1-205ENST00000461221 SEM1Q6ZVN7 128 aa7.01□□□□□ -1.29
BRCA1-205ENST00000461221 GATA1P15976 413 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-205ENST00000461221 NPBQ8NG41 125 aa7.01□□□□□ -1.29
BRCA1-205ENST00000461221 BRK1Q8WUW1 75 aa7.01□□□□□ -1.29
BRCA1-205ENST00000461221 IGKV4-1P06312 121 aa7.01□□□□□ -1.29
BRCA1-205ENST00000461221 SPAG11BQ08648 103 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms