RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 MBD2Q9UBB5 411 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 RPH3ALQ9UNE2 315 aa9.91□□□□□ -0.82
SMPD4-216ENST00000461187 TYMSP04818 313 aa9.9□□□□□ -0.82
SMPD4-216ENST00000461187 CRYGDP07320 174 aa9.9□□□□□ -0.82
SMPD4-216ENST00000461187 Q5VSD8 79 aa9.9□□□□□ -0.82
SMPD4-216ENST00000461187 GOLT1AQ6ZVE7 132 aa9.9□□□□□ -0.82
SMPD4-216ENST00000461187 CMTM2Q8TAZ6 248 aa9.9□□□□□ -0.82
SMPD4-216ENST00000461187 SRRM2Q9UQ35 2752 aaKnown RBP9.89□□□□□ -0.83
SMPD4-216ENST00000461187 TRAV21A0A0B4J279 112 aa9.89□□□□□ -0.83
SMPD4-216ENST00000461187 F6UZH7 168 aa9.89□□□□□ -0.83
SMPD4-216ENST00000461187 GATA1P15976 413 aaPredicted RBP9.89□□□□□ -0.83
SMPD4-216ENST00000461187 RPL12P30050 165 aaKnown RBP9.89□□□□□ -0.83
SMPD4-216ENST00000461187 TIRAPP58753 221 aa9.89□□□□□ -0.83
SMPD4-216ENST00000461187 SH2D6Q7Z4S9 175 aa9.89□□□□□ -0.83
SMPD4-216ENST00000461187 C10orf126Q8N4M7 172 aa9.89□□□□□ -0.83
SMPD4-216ENST00000461187 ARL6IP6Q8N6S5 226 aa9.89□□□□□ -0.83
SMPD4-216ENST00000461187 MARVELD1Q9BSK0 173 aa9.89□□□□□ -0.83
SMPD4-216ENST00000461187 WFDC1Q9HC57 220 aa9.89□□□□□ -0.83
SMPD4-216ENST00000461187 TRAV8-1A0A0A6YYK1 113 aa9.88□□□□□ -0.83
SMPD4-216ENST00000461187 PET100P0DJ07 73 aa9.88□□□□□ -0.83
SMPD4-216ENST00000461187 GCSHP23434 173 aa9.88□□□□□ -0.83
SMPD4-216ENST00000461187 FAM74A1Q5RGS3 127 aa9.88□□□□□ -0.83
SMPD4-216ENST00000461187 PQLC2Q6ZP29 291 aa9.88□□□□□ -0.83
SMPD4-216ENST00000461187 FRZBQ92765 325 aa9.88□□□□□ -0.83
SMPD4-216ENST00000461187 TREM1Q9NP99 234 aa9.88□□□□□ -0.83
SMPD4-216ENST00000461187 IGHV3-38A0A0C4DH36 116 aa9.87□□□□□ -0.83
SMPD4-216ENST00000461187 LRCOL1A6NCL2 159 aa9.87□□□□□ -0.83
SMPD4-216ENST00000461187 GNG5P63218 68 aa9.87□□□□□ -0.83
SMPD4-216ENST00000461187 ACOT6Q3I5F7 207 aaPredicted RBP9.87□□□□□ -0.83
SMPD4-216ENST00000461187 NHLRC2Q8NBF2 726 aa9.87□□□□□ -0.83
SMPD4-216ENST00000461187 KCNS1Q96KK3 526 aa9.87□□□□□ -0.83
SMPD4-216ENST00000461187 SDF2L1Q9HCN8 221 aa9.87□□□□□ -0.83
SMPD4-216ENST00000461187 A0A1W2PPV4 95 aa9.86□□□□□ -0.83
SMPD4-216ENST00000461187 SSNA1O43805 119 aa9.86□□□□□ -0.83
SMPD4-216ENST00000461187 RAB2AP61019 212 aa9.86□□□□□ -0.83
SMPD4-216ENST00000461187 LINC01556Q5JQF7 62 aa9.86□□□□□ -0.83
SMPD4-216ENST00000461187 ASB13Q8WXK3 278 aa9.86□□□□□ -0.83
SMPD4-216ENST00000461187 MYCBP2O75592 4640 aa9.86□□□□□ -0.83
SMPD4-216ENST00000461187 FBLL1A6NHQ2 334 aaKnown RBP9.85□□□□□ -0.83
SMPD4-216ENST00000461187 IBA57-AS1B1ANH7 110 aa9.85□□□□□ -0.83
SMPD4-216ENST00000461187 HMGB3O15347 200 aaKnown RBP9.85□□□□□ -0.83
SMPD4-216ENST00000461187 SMR3BP02814 79 aaPredicted RBP9.85□□□□□ -0.83
SMPD4-216ENST00000461187 PPT1P50897 306 aa9.85□□□□□ -0.83
SMPD4-216ENST00000461187 SLC25A29Q8N8R3 303 aa9.85□□□□□ -0.83
SMPD4-216ENST00000461187 SGK494Q96LW2 274 aa9.85□□□□□ -0.83
SMPD4-216ENST00000461187 C11orf21Q9P2W6 132 aa9.85□□□□□ -0.83
SMPD4-216ENST00000461187 RS1O15537 224 aa9.84□□□□□ -0.83
SMPD4-216ENST00000461187 PSCAO43653 123 aa9.84□□□□□ -0.83
SMPD4-216ENST00000461187 PFN1P07737 140 aaKnown RBP9.84□□□□□ -0.83
SMPD4-216ENST00000461187 ZNF80P51504 273 aaPredicted RBP9.84□□□□□ -0.83
SMPD4-216ENST00000461187 HAMPP81172 84 aa9.84□□□□□ -0.83
SMPD4-216ENST00000461187 ZNF876PQ49A33 203 aa9.84□□□□□ -0.83
SMPD4-216ENST00000461187 CFAP126Q5VTH2 177 aa9.84□□□□□ -0.83
SMPD4-216ENST00000461187 DPPA3Q6W0C5 159 aa9.84□□□□□ -0.83
SMPD4-216ENST00000461187 IGLV5-52A0A0A0MRZ9 124 aa9.83□□□□□ -0.84
SMPD4-216ENST00000461187 CIDEAO60543 219 aa9.83□□□□□ -0.84
SMPD4-216ENST00000461187 ARL14EPLP0DKL9 152 aa9.83□□□□□ -0.84
SMPD4-216ENST00000461187 OR10G9Q8NGN4 311 aa9.83□□□□□ -0.84
SMPD4-216ENST00000461187 OR10G7Q8NGN6 311 aa9.83□□□□□ -0.84
SMPD4-216ENST00000461187 NTN5Q8WTR8 489 aaPredicted RBP9.83□□□□□ -0.84
SMPD4-216ENST00000461187 DNAH8Q96JB1 4490 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 TRAV8-6A0A0B4J262 113 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 SERTM2A0A1B0GWG4 89 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 TRBV6-4A0A1B0GX49 114 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 RHOHQ15669 191 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 OR10J3Q5JRS4 329 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 SUN5Q8TC36 379 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 C9orf85Q96MD7 179 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 PRADC1Q9BSG0 188 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 NDFIP1Q9BT67 221 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 TMEM70Q9BUB7 260 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 Q9HAA7 133 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 BOLA1Q9Y3E2 137 aa9.82□□□□□ -0.84
SMPD4-216ENST00000461187 IGHV3-73A0A0B4J1V6 119 aa9.81□□□□□ -0.84
SMPD4-216ENST00000461187 TAAR5O14804 337 aa9.81□□□□□ -0.84
SMPD4-216ENST00000461187 TCRAP04437 139 aa9.81□□□□□ -0.84
SMPD4-216ENST00000461187 STAG3L2P0CL84 134 aa9.81□□□□□ -0.84
SMPD4-216ENST00000461187 STAG3L3P0CL85 134 aa9.81□□□□□ -0.84
SMPD4-216ENST00000461187 CDC34P49427 236 aaPredicted RBP9.81□□□□□ -0.84
SMPD4-216ENST00000461187 LELP1Q5T871 98 aa9.81□□□□□ -0.84
SMPD4-216ENST00000461187 Q8N814 137 aa9.81□□□□□ -0.84
SMPD4-216ENST00000461187 TMEM75Q8N9X5 138 aa9.81□□□□□ -0.84
SMPD4-216ENST00000461187 C5orf17Q8NAS9 161 aa9.81□□□□□ -0.84
SMPD4-216ENST00000461187 PTH2Q96A98 100 aa9.81□□□□□ -0.84
SMPD4-216ENST00000461187 PSG8Q9UQ74 426 aa9.81□□□□□ -0.84
SMPD4-216ENST00000461187 PGPEP1LA6NFU8 196 aa9.8□□□□□ -0.84
SMPD4-216ENST00000461187 GCGP01275 180 aa9.8□□□□□ -0.84
SMPD4-216ENST00000461187 IGLV2-11P01706 119 aa9.8□□□□□ -0.84
SMPD4-216ENST00000461187 IGHV3-30P01768 117 aa9.8□□□□□ -0.84
SMPD4-216ENST00000461187 IGHV3-33P01772 117 aa9.8□□□□□ -0.84
SMPD4-216ENST00000461187 IGHV3-30-3P0DP02 117 aa9.8□□□□□ -0.84
SMPD4-216ENST00000461187 IGHV3-30-5P0DP03 117 aa9.8□□□□□ -0.84
SMPD4-216ENST00000461187 ZNF506Q5JVG8 444 aa9.8□□□□□ -0.84
SMPD4-216ENST00000461187 OR2G3Q8NGZ4 309 aa9.8□□□□□ -0.84
SMPD4-216ENST00000461187 FAM229AH3BQW9 127 aa9.79□□□□□ -0.84
SMPD4-216ENST00000461187 RNASE3P12724 160 aaKnown RBP9.79□□□□□ -0.84
SMPD4-216ENST00000461187 GCHFRP30047 84 aa9.79□□□□□ -0.84
SMPD4-216ENST00000461187 DEFA1P59665 94 aa9.79□□□□□ -0.84
SMPD4-216ENST00000461187 DEFA3P59666 94 aa9.79□□□□□ -0.84
SMPD4-216ENST00000461187 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms