RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 WDR87Q6ZQQ6 2873 aa1.78□□□□□ -2.12
HPS3-203ENST00000460822 F5P12259 2224 aa1.78□□□□□ -2.12
HPS3-203ENST00000460822 ASCC3Q8N3C0 2202 aaKnown RBP1.78□□□□□ -2.12
HPS3-203ENST00000460822 MYO9BQ13459 2157 aa1.78□□□□□ -2.12
HPS3-203ENST00000460822 TRIOO75962 3097 aa1.78□□□□□ -2.12
HPS3-203ENST00000460822 ASXL3Q9C0F0 2248 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 TRAV30A0A087WSZ9 112 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 IGKV3D-11A0A0A0MRZ8 115 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 FAM236DA0A1B0GTK5 79 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 UBE2L5PA0A1B0GUS4 154 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 A8MWP4 228 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 HMGB3O15347 200 aaKnown RBP1.78□□□□□ -2.13
HPS3-203ENST00000460822 SYNGR2O43760 224 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 APOMO95445 188 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 FAM236CP0DP71 79 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 IAPPP10997 89 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 SLC25A6P12236 298 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 MPV17P39210 176 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 SLC38A11Q08AI6 406 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 Q0VG73 95 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 PLPPR5Q32ZL2 321 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 Q6ZS49 121 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 OSR2Q8N2R0 312 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 OR2D3Q8NGH3 330 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 SGMS2Q8NHU3 365 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 OR5P3Q8WZ94 311 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 PSMF1Q92530 271 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 GPR146Q96CH1 333 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 STARD4Q96DR4 205 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 OR4C12Q96R67 309 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 ENY2Q9NPA8 101 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 PSENENQ9NZ42 101 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 TIMM9Q9Y5J7 89 aa1.78□□□□□ -2.13
HPS3-203ENST00000460822 NACAE9PAV3 2078 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 TRBV20OR9-2A0A075B6H5 130 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 TRAV9-1A0A075B6T8 112 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 IGHV1-69-2A0A0G2JMI3 117 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 MDFIC2A0A1B0GVS7 189 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 IGLC7A0M8Q6 106 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 A6NED7 52 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.77□□□□□ -2.13
HPS3-203ENST00000460822 M0R135 149 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 RTL8CO15255 209 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 PDE6DO43924 150 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 NAPSAO96009 420 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 GPX1P07203 203 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 DEFA4P12838 97 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 ZNF32P17041 273 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 CBLN1P23435 193 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 HINT1P49773 126 aaPredicted RBP1.77□□□□□ -2.13
HPS3-203ENST00000460822 CRYBA4P53673 196 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 RBM11P57052 281 aaKnown RBP1.77□□□□□ -2.13
HPS3-203ENST00000460822 RPS20P60866 119 aaKnown RBP1.77□□□□□ -2.13
HPS3-203ENST00000460822 KRTDAPP60985 99 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 FGF12P61328 243 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 RHOGP84095 191 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 OCIAD2Q56VL3 154 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 LDLRAD2Q5SZI1 272 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 TMEM14EPQ6UXP3 125 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 SIGLECL1Q8N7X8 197 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 RMI2Q96E14 147 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 BORCS8Q96FH0 119 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 VPS25Q9BRG1 176 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 FAM103A1Q9BTL3 118 aaKnown RBP1.77□□□□□ -2.13
HPS3-203ENST00000460822 DERL1Q9BUN8 251 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 RNASE7Q9H1E1 156 aaKnown RBP1.77□□□□□ -2.13
HPS3-203ENST00000460822 CST9LQ9H4G1 147 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 RPUSD1Q9UJJ7 312 aaKnown RBP1.77□□□□□ -2.13
HPS3-203ENST00000460822 S4R3C0 116 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 FREM1Q5H8C1 2179 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 FRYQ5TBA9 3013 aa1.77□□□□□ -2.13
HPS3-203ENST00000460822 EYSQ5T1H1 3165 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 PIGBOS1A0A0B4J2F0 54 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 LOC102725191A0A1B0GVB3 256 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 A0A1W2PRS3 328 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 KNCNA6PVL3 124 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 DEGS1O15121 323 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 PGLYRP1O75594 196 aaPredicted RBP1.76□□□□□ -2.13
HPS3-203ENST00000460822 S1PR2O95136 353 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 IGKV1-5P01602 117 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 SERPINA7P05543 415 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 CRYGDP07320 174 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 SCTP09683 121 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 C3orf79P0CE67 100 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 CRYGSP22914 178 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 S100A7P31151 101 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 ATP5G3P48201 142 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 TNFAIP6P98066 277 aaPredicted RBP1.76□□□□□ -2.13
HPS3-203ENST00000460822 TFF3Q07654 80 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 SPANXN5Q5MJ07 72 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 C10orf128Q5T292 105 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 TEX36Q5VZQ5 186 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 SLC25A34Q6PIV7 304 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 C16orf47Q6ZP98 133 aaPredicted RBP1.76□□□□□ -2.13
HPS3-203ENST00000460822 BAGE3Q86Y29 109 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 BAGE2Q86Y30 109 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 TCTEX1D1Q8N7M0 179 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 ST20-AS1Q8NBB2 130 aa1.76□□□□□ -2.13
HPS3-203ENST00000460822 LSM10Q969L4 123 aaKnown RBP1.76□□□□□ -2.13
HPS3-203ENST00000460822 SPTSSAQ969W0 71 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms