RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 TCF21O43680 179 aa10.47□□□□□ -0.73
PTPRN-210ENST00000460801 NCR2O95944 276 aa10.47□□□□□ -0.73
PTPRN-210ENST00000460801 PLA2G2AP14555 144 aa10.47□□□□□ -0.73
PTPRN-210ENST00000460801 SYNJ2BPP57105 145 aa10.47□□□□□ -0.73
PTPRN-210ENST00000460801 CACNG7P62955 275 aa10.47□□□□□ -0.73
PTPRN-210ENST00000460801 DUX5Q96PT3 197 aa10.47□□□□□ -0.73
PTPRN-210ENST00000460801 MS4A6AQ9H2W1 248 aa10.47□□□□□ -0.73
PTPRN-210ENST00000460801 LAMTOR2Q9Y2Q5 125 aa10.47□□□□□ -0.73
PTPRN-210ENST00000460801 CCDC168Q8NDH2 2452 aa10.47□□□□□ -0.73
PTPRN-210ENST00000460801 TRAV9-2A0A087WT02 112 aa10.46□□□□□ -0.73
PTPRN-210ENST00000460801 HOXD3P31249 432 aaPredicted RBP10.46□□□□□ -0.73
PTPRN-210ENST00000460801 ZNF705AQ6ZN79 300 aaPredicted RBP10.46□□□□□ -0.73
PTPRN-210ENST00000460801 WFDC3Q8IUB2 231 aa10.46□□□□□ -0.73
PTPRN-210ENST00000460801 ZNF747Q9BV97 191 aa10.46□□□□□ -0.73
PTPRN-210ENST00000460801 MAP1LC3CQ9BXW4 147 aa10.46□□□□□ -0.73
PTPRN-210ENST00000460801 NBPF19A0A087WUL8 3843 aa10.46□□□□□ -0.73
PTPRN-210ENST00000460801 GAS8-AS1O95177 125 aa10.46□□□□□ -0.74
PTPRN-210ENST00000460801 EVI2AP22794 236 aa10.46□□□□□ -0.74
PTPRN-210ENST00000460801 RNASE4P34096 147 aaKnown RBP10.46□□□□□ -0.74
PTPRN-210ENST00000460801 MAJINQ3KP22 176 aa10.46□□□□□ -0.74
PTPRN-210ENST00000460801 PET117Q6UWS5 81 aa10.46□□□□□ -0.74
PTPRN-210ENST00000460801 TMEM86BQ8N661 226 aa10.46□□□□□ -0.74
PTPRN-210ENST00000460801 C2orf88Q9BSF0 95 aa10.46□□□□□ -0.74
PTPRN-210ENST00000460801 C20orf202A1L168 122 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 H3BVH4 76 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 IGLC3P0DOY3 106 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 KIR3DS1Q14943 382 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 TEX29Q8N6K0 151 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 KLHDC1Q8N7A1 406 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 ZNF469Q96JG9 3925 aaPredicted RBP10.45□□□□□ -0.74
PTPRN-210ENST00000460801 OR4C46A6NHA9 309 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 KLLNB2CW77 178 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 J3QKU1 62 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 K7EQG2 157 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 ANXA2RQ3ZCQ2 193 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 SPANXN1Q5VSR9 72 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 SMIM15Q7Z3B0 74 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 SNHG12Q9BXW3 62 aa10.45□□□□□ -0.74
PTPRN-210ENST00000460801 SONP18583 2426 aaKnown RBP10.44□□□□□ -0.74
PTPRN-210ENST00000460801 LINC01546A6NGU7 62 aa10.44□□□□□ -0.74
PTPRN-210ENST00000460801 EREGO14944 169 aa10.44□□□□□ -0.74
PTPRN-210ENST00000460801 TNFRSF6BO95407 300 aa10.44□□□□□ -0.74
PTPRN-210ENST00000460801 MAP1LC3AQ9H492 121 aa10.44□□□□□ -0.74
PTPRN-210ENST00000460801 FLNAP21333 2647 aaKnown RBP10.44□□□□□ -0.74
PTPRN-210ENST00000460801 MED14OSP0DP75 135 aa10.43□□□□□ -0.74
PTPRN-210ENST00000460801 MRPL52Q86TS9 123 aaKnown RBP10.43□□□□□ -0.74
PTPRN-210ENST00000460801 LURAP1LQ8IV03 231 aa10.43□□□□□ -0.74
PTPRN-210ENST00000460801 UQCR10Q9UDW1 63 aa10.43□□□□□ -0.74
PTPRN-210ENST00000460801 M0R143 59 aa10.43□□□□□ -0.74
PTPRN-210ENST00000460801 ZNF688P0C7X2 276 aa10.43□□□□□ -0.74
PTPRN-210ENST00000460801 IGLL1P15814 213 aa10.43□□□□□ -0.74
PTPRN-210ENST00000460801 ASIPP42127 132 aa10.43□□□□□ -0.74
PTPRN-210ENST00000460801 TFPI2P48307 235 aa10.43□□□□□ -0.74
PTPRN-210ENST00000460801 SCRT2Q9NQ03 307 aa10.43□□□□□ -0.74
PTPRN-210ENST00000460801 TIMM8BQ9Y5J9 83 aaPredicted RBP10.43□□□□□ -0.74
PTPRN-210ENST00000460801 HELZ2Q9BYK8 2649 aaKnown RBP10.43□□□□□ -0.74
PTPRN-210ENST00000460801 GATA1P15976 413 aaPredicted RBP10.42□□□□□ -0.74
PTPRN-210ENST00000460801 SNRPD3P62318 126 aaKnown RBP10.42□□□□□ -0.74
PTPRN-210ENST00000460801 LINC01545Q5VT33 79 aa10.42□□□□□ -0.74
PTPRN-210ENST00000460801 C18orf65Q6ZTR6 163 aa10.42□□□□□ -0.74
PTPRN-210ENST00000460801 HBDP02042 147 aa10.42□□□□□ -0.74
PTPRN-210ENST00000460801 PSMG4Q5JS54 123 aa10.42□□□□□ -0.74
PTPRN-210ENST00000460801 ADAMTSL5Q6ZMM2 481 aa10.42□□□□□ -0.74
PTPRN-210ENST00000460801 ODF3Q96PU9 254 aa10.42□□□□□ -0.74
PTPRN-210ENST00000460801 NXT2Q9NPJ8 142 aaKnown RBP10.42□□□□□ -0.74
PTPRN-210ENST00000460801 PDZD2O15018 2839 aa10.42□□□□□ -0.74
PTPRN-210ENST00000460801 A0A0J9YX75 114 aa10.41□□□□□ -0.74
PTPRN-210ENST00000460801 PRSS47A8MTI9 375 aa10.41□□□□□ -0.74
PTPRN-210ENST00000460801 S100A4P26447 101 aaKnown RBP10.41□□□□□ -0.74
PTPRN-210ENST00000460801 TCTEX1D4Q5JR98 221 aa10.41□□□□□ -0.74
PTPRN-210ENST00000460801 OR2K2Q8NGT1 345 aa10.41□□□□□ -0.74
PTPRN-210ENST00000460801 GNRH2O43555 120 aa10.41□□□□□ -0.74
PTPRN-210ENST00000460801 RNASE3P12724 160 aaKnown RBP10.41□□□□□ -0.74
PTPRN-210ENST00000460801 DEFB125Q8N687 156 aa10.41□□□□□ -0.74
PTPRN-210ENST00000460801 SLURP1P55000 103 aa10.4□□□□□ -0.74
PTPRN-210ENST00000460801 FXYD7P58549 80 aa10.4□□□□□ -0.74
PTPRN-210ENST00000460801 DEFB136Q30KP8 78 aa10.4□□□□□ -0.74
PTPRN-210ENST00000460801 NRACQ8N912 160 aa10.4□□□□□ -0.74
PTPRN-210ENST00000460801 C4orf3Q8WVX3 66 aa10.4□□□□□ -0.74
PTPRN-210ENST00000460801 MCRIP2Q9BUT9 160 aaKnown RBP10.4□□□□□ -0.74
PTPRN-210ENST00000460801 IGLV2-18A0A075B6J9 118 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 LINC01619G3V211 115 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 Q6ZSV7 163 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 PHLDA3Q9Y5J5 127 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 SORL1Q92673 2214 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 TRAV26-2A0A0B4J265 109 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 A0A1B0GV90 55 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 DNAJC9-AS1A6NH13 148 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 H0Y8G0 127 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 M0R381 172 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 SPRY2O43597 315 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 LEPP41159 167 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 KRTAP1-1Q07627 177 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 Q8N8P6 123 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 MRAP2Q96G30 205 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 ST20Q9HBF5 79 aa10.39□□□□□ -0.75
PTPRN-210ENST00000460801 C7orf71A4D174 169 aa10.38□□□□□ -0.75
PTPRN-210ENST00000460801 Q6ZN92 141 aa10.38□□□□□ -0.75
PTPRN-210ENST00000460801 WFDC12Q8WWY7 111 aa10.38□□□□□ -0.75
PTPRN-210ENST00000460801 ITPR2Q14571 2701 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms