RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 XCL2Q9UBD3 114 aa7.15□□□□□ -1.27
SHROOM4-203ENST00000460112 NDUFA12Q9UI09 145 aa7.15□□□□□ -1.27
SHROOM4-203ENST00000460112 HLA-DRB4X5D2U9 266 aa7.15□□□□□ -1.27
SHROOM4-203ENST00000460112 RAI1Q7Z5J4 1906 aaPredicted RBP7.15□□□□□ -1.27
SHROOM4-203ENST00000460112 SDHAF1A6NFY7 115 aa7.15□□□□□ -1.27
SHROOM4-203ENST00000460112 TIRAPP58753 221 aa7.15□□□□□ -1.27
SHROOM4-203ENST00000460112 KNCNA6PVL3 124 aa7.15□□□□□ -1.27
SHROOM4-203ENST00000460112 ELANEP08246 267 aa7.15□□□□□ -1.27
SHROOM4-203ENST00000460112 ATOX1O00244 68 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 COL5A1P20908 1838 aaPredicted RBP7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 A0A1B0GUS0 222 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 IGLC2P0DOY2 106 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 IGLC3P0DOY3 106 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 MRPL36Q9P0J6 103 aaKnown RBP7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 C9JQL5 133 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 SEC61GP60059 68 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 Q6P435 159 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 CFHR4Q92496 578 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 ATP6V0E1O15342 81 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 C10orf55Q5SWW7 151 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 ZNF833PQ6ZTB9 187 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 SPATA25Q9BR10 227 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 PINLYPA6NC86 204 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 C8orf86Q6ZUL3 223 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 C17orf82Q86X59 251 aaPredicted RBP7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 F8VRH5 84 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 IGKV1-5P01602 117 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 ANGP03950 147 aaKnown RBP7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 C4orf48Q5BLP8 95 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 RNF223E7ERA6 249 aa7.14□□□□□ -1.27
SHROOM4-203ENST00000460112 H3BMG7 143 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 SP5Q6BEB4 398 aaPredicted RBP7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 BRK1Q8WUW1 75 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 PRO1854Q9UHT4 67 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 IGKV1D-17A0A075B6S4 117 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 SLC25A29Q8N8R3 303 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 A0A1W2PPI3 338 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 ANXA2RQ3ZCQ2 193 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 Q96MF0 132 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 GFI1Q99684 422 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 ETDCA0A1B0GVM5 59 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 SMIM27A0A1W2PRY6 76 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 RBAKDNA6NC62 111 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 SPINK13Q1W4C9 94 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 Q6ZS92 163 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 CARD19Q96LW7 228 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 SPANXB1Q9NS25 103 aaPredicted RBP7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 TRBV19A0A075B6N1 114 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 IGKV1-27A0A075B6S5 117 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 CCL25O15444 150 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 DUX4L9Q6RFH8 374 aaPredicted RBP7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 Q6ZWC4 215 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 FLVCR1-AS1Q8TAF5 88 aa7.13□□□□□ -1.27
SHROOM4-203ENST00000460112 CLPSP04118 112 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 LTBP2Q14767 1821 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 EFNA2O43921 213 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 LINC00311Q8N616 119 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 C15orf62A8K5M9 175 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 CEND1Q8N111 149 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 IL17DQ8TAD2 202 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 MRPL53Q96EL3 112 aaKnown RBP7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 ZNF503Q96F45 646 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 IGHV7-4-1A0A0J9YVY3 117 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 LINC00473A8K010 186 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 C9orf66Q5T8R8 295 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 NDUFA4L2Q9NRX3 87 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 IGKV2D-24A0A075B6R9 120 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 IGHG2P01859 326 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 C15orf53Q8NAA6 179 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 C16orf74Q96GX8 76 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 TRAV3A0A0B4J244 114 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 NTF4P34130 210 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 ZNRF2Q8NHG8 242 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 TM2D2Q9BX73 214 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 IGKV1-12A0A0C4DH73 117 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 IGKV1D-12P01611 117 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 KLK9Q9UKQ9 250 aa7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 ZFHX2Q9C0A1 2572 aaPredicted RBP7.12□□□□□ -1.27
SHROOM4-203ENST00000460112 H3BRN7 92 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 J3QKU1 62 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 FGF6P10767 208 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 ICOSQ9Y6W8 199 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 ANKRD17O75179 2603 aaKnown RBP7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 SMKR1H3BMG3 65 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 CRYBA4P53673 196 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 ZNF493Q6ZR52 646 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 C18orf32Q8TCD1 76 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 IGF2BP2-AS1Q96M15 143 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 PNRC2Q9NPJ4 139 aaKnown RBP7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 ZNF462Q96JM2 2506 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 F6UB75 175 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 TFF1P04155 84 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 CFHR3Q02985 330 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 Q8NFD4 153 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 KIR2DL5BA0A0G2JN68 375 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 KIR2DL5BA0A0G2JPC4 375 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 ADCYAP1P18509 176 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 RPL18AQ02543 176 aaKnown RBP7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 KIR2DL5AQ8N109 375 aa7.11□□□□□ -1.27
SHROOM4-203ENST00000460112 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms