RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TRAV9-2A0A087WT02 112 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 TRGV4A0A0C4DH28 118 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 IGHV3-16A0A0C4DH30 117 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 C9JCJ5 164 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 CDK2AP2O75956 126 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 TIRAPP58753 221 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 TNP2Q05952 138 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 ZFP69Q49AA0 526 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 PIK3CD-AS1Q5SR53 167 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 MUC21Q5SSG8 566 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 SAPCD1Q5SSQ6 148 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 Q6ZQT7 251 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 NFE4Q86UQ8 179 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 CYB561D1Q8N8Q1 229 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 PCNPQ8WW12 178 aaKnown RBP6.88□□□□□ -1.31
HDLBP-228ENST00000459788 TXNDC17Q9BRA2 123 aa6.88□□□□□ -1.31
HDLBP-228ENST00000459788 CTXND1A0A1B0GTU2 59 aa6.87□□□□□ -1.31
HDLBP-228ENST00000459788 RNF222A6NCQ9 220 aa6.87□□□□□ -1.31
HDLBP-228ENST00000459788 PFN1P07737 140 aaKnown RBP6.87□□□□□ -1.31
HDLBP-228ENST00000459788 SRIP30626 198 aa6.87□□□□□ -1.31
HDLBP-228ENST00000459788 LYPD5Q6UWN5 251 aa6.87□□□□□ -1.31
HDLBP-228ENST00000459788 TVP23CQ96ET8 276 aa6.87□□□□□ -1.31
HDLBP-228ENST00000459788 C8orf49Q96NF6 230 aa6.87□□□□□ -1.31
HDLBP-228ENST00000459788 TCEAL7Q9BRU2 100 aa6.87□□□□□ -1.31
HDLBP-228ENST00000459788 KRTAP1-5Q9BYS1 174 aa6.87□□□□□ -1.31
HDLBP-228ENST00000459788 EPDR1Q9UM22 224 aa6.87□□□□□ -1.31
HDLBP-228ENST00000459788 TRAV8-1A0A0A6YYK1 113 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 K7EQD1 137 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 NXPH4O95158 308 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 TYMSP04818 313 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 PPT1P50897 306 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 SUMO1P63165 101 aaKnown RBP6.86□□□□□ -1.31
HDLBP-228ENST00000459788 FLI1Q01543 452 aaPredicted RBP6.86□□□□□ -1.31
HDLBP-228ENST00000459788 RGS21Q2M5E4 152 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 SMUG1Q53HV7 270 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 OR4C5Q8NGB2 326 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 OR2T35Q8NGX2 323 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 ZNF479Q96JC4 524 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 RPH3ALQ9UNE2 315 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 PSG8Q9UQ74 426 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 ARL2-SNX15V9GYD0 113 aa6.86□□□□□ -1.31
HDLBP-228ENST00000459788 FXYD6-FXYD2A0A087WZ82 144 aa6.85□□□□□ -1.31
HDLBP-228ENST00000459788 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
HDLBP-228ENST00000459788 GGTLC3B5MD39 225 aa6.85□□□□□ -1.31
HDLBP-228ENST00000459788 HMGB3O15347 200 aaKnown RBP6.85□□□□□ -1.31
HDLBP-228ENST00000459788 IGLV2-11P01706 119 aa6.85□□□□□ -1.31
HDLBP-228ENST00000459788 IGHV3-53P01767 116 aa6.85□□□□□ -1.31
HDLBP-228ENST00000459788 Q5BKY6 102 aa6.85□□□□□ -1.31
HDLBP-228ENST00000459788 RPL7L1Q6DKI1 246 aaKnown RBP6.85□□□□□ -1.31
HDLBP-228ENST00000459788 COX8CQ7Z4L0 72 aa6.85□□□□□ -1.31
HDLBP-228ENST00000459788 C10orf126Q8N4M7 172 aa6.85□□□□□ -1.31
HDLBP-228ENST00000459788 HIST1H2BAQ96A08 127 aa6.85□□□□□ -1.31
HDLBP-228ENST00000459788 SH3BGRL3Q9H299 93 aa6.85□□□□□ -1.31
HDLBP-228ENST00000459788 NAGKQ9UJ70 344 aa6.85□□□□□ -1.31
HDLBP-228ENST00000459788 RYR1P21817 5038 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 TRBV6-4A0A1B0GX49 114 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 EREGO14944 169 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 GNRH2O43555 120 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 GCGP01275 180 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 DNAH10OSP0CZ25 163 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 GYPEP15421 78 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 GATA1P15976 413 aaPredicted RBP6.84□□□□□ -1.31
HDLBP-228ENST00000459788 FHITP49789 147 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 LINC00315P59091 139 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 GNG5P63218 68 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 ZNF345Q14585 488 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 AKR1C8PQ5T2L2 129 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 CDPF1Q6NVV7 123 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 Q6ZRN7 208 aaPredicted RBP6.84□□□□□ -1.31
HDLBP-228ENST00000459788 ZNF575Q86XF7 245 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 C9orf85Q96MD7 179 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 LY96Q9Y6Y9 160 aa6.84□□□□□ -1.31
HDLBP-228ENST00000459788 LRP1BQ9NZR2 4599 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 TRBV6-1A0A0K0K1D8 114 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 FABP5P3A8MUU1 101 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 F6UZH7 168 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 RS1O15537 224 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 EIF3GO75821 320 aaKnown RBP eCLIP6.83□□□□□ -1.32
HDLBP-228ENST00000459788 SFTA3P0C7M3 94 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 EVI2AP22794 236 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 ZNF876PQ49A33 203 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 DNLZQ5SXM8 178 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 ZFP2Q6ZN57 461 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 ZFP30Q9Y2G7 519 aa6.83□□□□□ -1.32
HDLBP-228ENST00000459788 HMSDA8MTL9 139 aa6.82□□□□□ -1.32
HDLBP-228ENST00000459788 A8MWV9 139 aa6.82□□□□□ -1.32
HDLBP-228ENST00000459788 G3V3Q6 166 aa6.82□□□□□ -1.32
HDLBP-228ENST00000459788 MGST1P10620 155 aaKnown RBP6.82□□□□□ -1.32
HDLBP-228ENST00000459788 ZNF80P51504 273 aaPredicted RBP6.82□□□□□ -1.32
HDLBP-228ENST00000459788 RHOHQ15669 191 aa6.82□□□□□ -1.32
HDLBP-228ENST00000459788 ZNF726P1Q15940 193 aa6.82□□□□□ -1.32
HDLBP-228ENST00000459788 CFAP126Q5VTH2 177 aa6.82□□□□□ -1.32
HDLBP-228ENST00000459788 SPATA12Q7Z6I5 190 aa6.82□□□□□ -1.32
HDLBP-228ENST00000459788 PRNTQ86SH4 94 aa6.82□□□□□ -1.32
HDLBP-228ENST00000459788 STOML3Q8TAV4 291 aa6.82□□□□□ -1.32
HDLBP-228ENST00000459788 PRADC1Q9BSG0 188 aa6.82□□□□□ -1.32
HDLBP-228ENST00000459788 FAM74A7A6NL05 159 aa6.81□□□□□ -1.32
HDLBP-228ENST00000459788 UMAD1C9J7I0 102 aa6.81□□□□□ -1.32
HDLBP-228ENST00000459788 PEX7O00628 323 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 371.2 ms