RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 IGHV1-2P23083 117 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 LINC00310P59036 64 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 HERV-K104P61576 105 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 RPS11P62280 158 aaKnown RBP eCLIP3.38□□□□□ -1.87
RGPD6-206ENST00000459645 UBE2L3P68036 154 aaKnown RBP3.38□□□□□ -1.87
RGPD6-206ENST00000459645 POU3F1Q03052 451 aaPredicted RBP3.38□□□□□ -1.87
RGPD6-206ENST00000459645 ZNF117Q03924 483 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 TMEM170BQ5T4T1 132 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 C2orf91Q6ZV80 131 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 SH2D6Q7Z4S9 175 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 HMGN2P46Q86SG4 172 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 HAPLN4Q86UW8 402 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 IL1F10Q8WWZ1 152 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 SRSF12Q8WXF0 261 aaKnown RBP3.38□□□□□ -1.87
RGPD6-206ENST00000459645 H1FXQ92522 213 aaKnown RBP3.38□□□□□ -1.87
RGPD6-206ENST00000459645 EEF1AKMT3Q96AZ1 226 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 HDHD3Q9BSH5 251 aaPredicted RBP3.38□□□□□ -1.87
RGPD6-206ENST00000459645 SLC25A2Q9BXI2 301 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 ZNF665Q9H7R5 613 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 ZNF286AQ9HBT8 521 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 PLA2G2EQ9NZK7 142 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 TP53TG3Q9ULZ0 132 aa3.38□□□□□ -1.87
RGPD6-206ENST00000459645 ALMS1Q8TCU4 4167 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 TRAV2A0A0B4J234 112 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 IGLL5B9A064 214 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 J3QRE1 110 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 IGKCP01834 107 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 GATA2P23769 480 aaPredicted RBP3.37□□□□□ -1.87
RGPD6-206ENST00000459645 CSN1S1P47710 185 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 UBE2E1P51965 193 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 RPL30P62888 115 aaKnown RBP3.37□□□□□ -1.87
RGPD6-206ENST00000459645 CFHR3Q02985 330 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 C1orf140Q5VVS0 124 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 C6orf201Q7Z4U5 140 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 LY6G5BQ8NDX9 201 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 DEFB108BQ8NET1 73 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 ZNF563Q8TA94 476 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 TSKUQ8WUA8 353 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 NABP1Q96AH0 204 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 ZNF837Q96EG3 531 aaPredicted RBP3.37□□□□□ -1.87
RGPD6-206ENST00000459645 UBE2E2Q96LR5 201 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 TRGV9Q99603 122 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 PAXXQ9BUH6 204 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 CHAC1Q9BUX1 264 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 PARP12Q9H0J9 701 aaKnown RBP3.37□□□□□ -1.87
RGPD6-206ENST00000459645 GNB4Q9HAV0 340 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 IL36BQ9NZH7 164 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 WDR83OSQ9Y284 106 aa3.37□□□□□ -1.87
RGPD6-206ENST00000459645 PLECQ15149 4684 aaKnown RBP3.37□□□□□ -1.87
RGPD6-206ENST00000459645 SRRM2Q9UQ35 2752 aaKnown RBP3.36□□□□□ -1.87
RGPD6-206ENST00000459645 UBE2L5PA0A1B0GUS4 154 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 PLAC8L1A1L4L8 177 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 RBAKDNA6NC62 111 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 F2Z2F3 143 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 UBE2L6O14933 153 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 NDUFC1O43677 76 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 CPSF4O95639 269 aaKnown RBP3.36□□□□□ -1.87
RGPD6-206ENST00000459645 IGHV4-38-2P0DP08 117 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 GYPEP15421 78 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 S100A3P33764 101 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 SSR2P43308 183 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 APOC4P55056 127 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 PRR20EP86478 221 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 PRR20CP86479 221 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 PRR20DP86480 221 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 PRR20BP86481 221 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 PRR20AP86496 221 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 DAZ2Q13117 558 aaKnown RBP3.36□□□□□ -1.87
RGPD6-206ENST00000459645 LGALS9CQ6DKI2 356 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 LINC00305Q7Z4B0 112 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 COX8CQ7Z4L0 72 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 DAZ4Q86SG3 579 aaKnown RBP3.36□□□□□ -1.87
RGPD6-206ENST00000459645 LINC00643Q86TS7 51 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 PDPNQ86YL7 162 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 LINC00311Q8N616 119 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 PHLDA1Q8WV24 401 aaPredicted RBP3.36□□□□□ -1.87
RGPD6-206ENST00000459645 CARD19Q96LW7 228 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 GPX7Q96SL4 187 aaPredicted RBP3.36□□□□□ -1.87
RGPD6-206ENST00000459645 FAM103A1Q9BTL3 118 aaKnown RBP3.36□□□□□ -1.87
RGPD6-206ENST00000459645 DYNLRB1Q9NP97 96 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 DAZ3Q9NR90 486 aaKnown RBP3.36□□□□□ -1.87
RGPD6-206ENST00000459645 OTORQ9NRC9 128 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 PCTPQ9UKL6 214 aa3.36□□□□□ -1.87
RGPD6-206ENST00000459645 AMMECR1Q9Y4X0 333 aaPredicted RBP3.36□□□□□ -1.87
RGPD6-206ENST00000459645 HUWE1Q7Z6Z7 4374 aaKnown RBP3.36□□□□□ -1.87
RGPD6-206ENST00000459645 DMBT1Q9UGM3 2413 aaPredicted RBP3.35□□□□□ -1.87
RGPD6-206ENST00000459645 DNAH10Q8IVF4 4471 aa3.35□□□□□ -1.87
RGPD6-206ENST00000459645 A0A0J9YW62 118 aa3.35□□□□□ -1.87
RGPD6-206ENST00000459645 A0A1W2PNR3 127 aa3.35□□□□□ -1.87
RGPD6-206ENST00000459645 SRRM5B3KS81 715 aa3.35□□□□□ -1.87
RGPD6-206ENST00000459645 UPK2O00526 184 aa3.35□□□□□ -1.87
RGPD6-206ENST00000459645 SYNGR2O43760 224 aa3.35□□□□□ -1.87
RGPD6-206ENST00000459645 EFNA2O43921 213 aa3.35□□□□□ -1.87
RGPD6-206ENST00000459645 PGLYRP1O75594 196 aaPredicted RBP3.35□□□□□ -1.87
RGPD6-206ENST00000459645 LEPROTL1O95214 131 aa3.35□□□□□ -1.87
RGPD6-206ENST00000459645 GHRHP01286 108 aa3.35□□□□□ -1.87
RGPD6-206ENST00000459645 IGHV3-9P01782 118 aa3.35□□□□□ -1.87
RGPD6-206ENST00000459645 ELANEP08246 267 aa3.35□□□□□ -1.87
RGPD6-206ENST00000459645 LGALS3P17931 250 aaKnown RBP3.35□□□□□ -1.87
RGPD6-206ENST00000459645 DEFB112Q30KQ8 113 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms