RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 CHAC1Q9BUX1 264 aa6.58□□□□□ -1.36
VPS50-208ENST00000458707 MSRB1Q9NZV6 116 aa6.58□□□□□ -1.36
VPS50-208ENST00000458707 S4R3C0 116 aa6.58□□□□□ -1.36
VPS50-208ENST00000458707 ZNF462Q96JM2 2506 aa6.58□□□□□ -1.36
VPS50-208ENST00000458707 TRBV25-1A0A075B6N4 114 aa6.57□□□□□ -1.36
VPS50-208ENST00000458707 RBAKDNA6NC62 111 aa6.57□□□□□ -1.36
VPS50-208ENST00000458707 ODF3BA8MYP8 253 aa6.57□□□□□ -1.36
VPS50-208ENST00000458707 GAS8-AS1O95177 125 aa6.57□□□□□ -1.36
VPS50-208ENST00000458707 WFDC3Q8IUB2 231 aa6.57□□□□□ -1.36
VPS50-208ENST00000458707 CNOT1A5YKK6 2376 aaKnown RBP6.57□□□□□ -1.36
VPS50-208ENST00000458707 PIEZO2Q9H5I5 2752 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 LYNX1G3V0Z9 82 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 DPM2O94777 84 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 ORM1P02763 201 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 CTSGP08311 255 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 LYNX1P0DP58 116 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 GCSHP23434 173 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 TAL2Q16559 108 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 CEND1Q8N111 149 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 ARPC1AQ92747 370 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 DNAJC30Q96LL9 226 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 APC2O95996 2303 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 E9PLD3 99 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 PRSS1P07477 247 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 CD3EP07766 207 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 HLA-DMBP28068 263 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 NDPQ00604 133 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 KLK9Q2XQG4 91 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 IL17RELQ6ZVW7 336 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 DYNAPQ8N1N2 210 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 Q8N6K4 173 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 MRAPQ8TCY5 172 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 TMEM158Q8WZ71 300 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 KRTAP4-12Q9BQ66 201 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 KLK9Q9UKQ9 250 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 SELENOKQ9Y6D0 94 aa6.56□□□□□ -1.36
VPS50-208ENST00000458707 MGAQ8IWI9 3026 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 M0R1W7 72 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 PLA2G2AP14555 144 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 LY6DQ14210 128 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 EBI3Q14213 229 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 ZC2HC1BQ5TFG8 222 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 DTX2Q86UW9 622 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 ATP6V0E2Q8NHE4 81 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 BBC3Q96PG8 261 aaPredicted RBP6.55□□□□□ -1.36
VPS50-208ENST00000458707 FOXC2Q99958 501 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 TTTY13Q9BZ97 58 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 TACC2O95359 2948 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 BSNQ9UPA5 3926 aa6.55□□□□□ -1.36
VPS50-208ENST00000458707 ANKRD17O75179 2603 aaKnown RBP6.54□□□□□ -1.36
VPS50-208ENST00000458707 CEP295Q9C0D2 2601 aa6.54□□□□□ -1.36
VPS50-208ENST00000458707 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.54□□□□□ -1.36
VPS50-208ENST00000458707 A0A1W2PRD5 423 aa6.54□□□□□ -1.36
VPS50-208ENST00000458707 A0A1W2PRF3 423 aa6.54□□□□□ -1.36
VPS50-208ENST00000458707 A0A1W2PRM7 423 aa6.54□□□□□ -1.36
VPS50-208ENST00000458707 LINC01619G3V211 115 aa6.54□□□□□ -1.36
VPS50-208ENST00000458707 UCNP55089 124 aa6.54□□□□□ -1.36
VPS50-208ENST00000458707 IGFL4Q6B9Z1 124 aa6.54□□□□□ -1.36
VPS50-208ENST00000458707 GTSCR1Q86UQ5 136 aa6.54□□□□□ -1.36
VPS50-208ENST00000458707 NRACQ8N912 160 aa6.54□□□□□ -1.36
VPS50-208ENST00000458707 Q8NA96 180 aa6.54□□□□□ -1.36
VPS50-208ENST00000458707 IGHV4-4A0A075B6R2 117 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 IGKV3D-20A0A0C4DH25 116 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 K7ERJ3 54 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 GATA1P15976 413 aaPredicted RBP6.53□□□□□ -1.36
VPS50-208ENST00000458707 SRD5A1P18405 259 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 PRTN3P24158 256 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 HES1Q14469 280 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 LAGE3Q14657 143 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 Q6ZUT4 128 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 ZNF502Q8TBZ5 544 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 SLC50A1Q9BRV3 221 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 TEP1Q99973 2627 aaKnown RBP6.53□□□□□ -1.36
VPS50-208ENST00000458707 IGHV7-4-1A0A0J9YVY3 117 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 OOSP1A8MZH6 123 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 IGLL5B9A064 214 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 PRAC2D3DTV9 90 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 BUB3O43684 328 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 IGHV3-23P01764 117 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 ERCC8Q13216 396 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 ZFAND6Q6FIF0 208 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 PIMREGQ9BSJ6 248 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 NHP2Q9NX24 153 aaKnown RBP6.53□□□□□ -1.36
VPS50-208ENST00000458707 MRPL35Q9NZE8 188 aaKnown RBP6.53□□□□□ -1.36
VPS50-208ENST00000458707 ADGRG4Q8IZF6 3080 aa6.53□□□□□ -1.36
VPS50-208ENST00000458707 TRAV12-1A0A0B4J245 112 aa6.52□□□□□ -1.37
VPS50-208ENST00000458707 TRAV40A0A0B4J280 105 aa6.52□□□□□ -1.37
VPS50-208ENST00000458707 TRGV3P03979 118 aa6.52□□□□□ -1.37
VPS50-208ENST00000458707 PLNP26678 52 aa6.52□□□□□ -1.37
VPS50-208ENST00000458707 MAPKAPK5-AS1Q8N8E1 139 aa6.52□□□□□ -1.37
VPS50-208ENST00000458707 MYOZ3Q8TDC0 251 aa6.52□□□□□ -1.37
VPS50-208ENST00000458707 MRPL53Q96EL3 112 aaKnown RBP6.52□□□□□ -1.37
VPS50-208ENST00000458707 TMEM160Q9NX00 188 aa6.52□□□□□ -1.37
VPS50-208ENST00000458707 C11orf21Q9P2W6 132 aa6.52□□□□□ -1.37
VPS50-208ENST00000458707 ACACAQ13085 2346 aa6.52□□□□□ -1.37
VPS50-208ENST00000458707 IGHV7-81A0A0B4J1V7 117 aa6.51□□□□□ -1.37
VPS50-208ENST00000458707 A0A1B0GWB2 263 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms