RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 HSBP1L1C9JCN9 74 aa12.6□□□□□ -0.39
CCDC43-202ENST00000457422 TCAPO15273 167 aa12.6□□□□□ -0.39
CCDC43-202ENST00000457422 TNFRSF6BO95407 300 aa12.6□□□□□ -0.39
CCDC43-202ENST00000457422 SMIM15Q7Z3B0 74 aa12.6□□□□□ -0.39
CCDC43-202ENST00000457422 NXT2Q9NPJ8 142 aaKnown RBP12.6□□□□□ -0.39
CCDC43-202ENST00000457422 VPREB3Q9UKI3 123 aa12.6□□□□□ -0.39
CCDC43-202ENST00000457422 UFC1Q9Y3C8 167 aa12.6□□□□□ -0.39
CCDC43-202ENST00000457422 F6UB75 175 aa12.6□□□□□ -0.39
CCDC43-202ENST00000457422 LRRC75A-AS1Q8N1F1 130 aa12.6□□□□□ -0.39
CCDC43-202ENST00000457422 SRD5A1P18405 259 aa12.59□□□□□ -0.39
CCDC43-202ENST00000457422 EVI2AP22794 236 aa12.59□□□□□ -0.39
CCDC43-202ENST00000457422 FXYD7P58549 80 aa12.59□□□□□ -0.39
CCDC43-202ENST00000457422 COL5A1-AS1Q5SY13 56 aa12.59□□□□□ -0.39
CCDC43-202ENST00000457422 Q6YL49 198 aa12.59□□□□□ -0.39
CCDC43-202ENST00000457422 DEFB125Q8N687 156 aa12.59□□□□□ -0.39
CCDC43-202ENST00000457422 PMCHL2Q9BQD1 86 aa12.59□□□□□ -0.39
CCDC43-202ENST00000457422 PTPN13Q12923 2485 aa12.59□□□□□ -0.39
CCDC43-202ENST00000457422 H3BVH4 76 aa12.58□□□□□ -0.39
CCDC43-202ENST00000457422 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.39
CCDC43-202ENST00000457422 LGALS9CQ6DKI2 356 aa12.58□□□□□ -0.39
CCDC43-202ENST00000457422 PRSS47A8MTI9 375 aa12.58□□□□□ -0.4
CCDC43-202ENST00000457422 DEFB113Q30KQ7 82 aa12.58□□□□□ -0.4
CCDC43-202ENST00000457422 Q5PR19 223 aa12.58□□□□□ -0.4
CCDC43-202ENST00000457422 SPANXN1Q5VSR9 72 aa12.58□□□□□ -0.4
CCDC43-202ENST00000457422 DCANP1Q8TF63 244 aa12.58□□□□□ -0.4
CCDC43-202ENST00000457422 SCRT2Q9NQ03 307 aa12.58□□□□□ -0.4
CCDC43-202ENST00000457422 PRRC2AP48634 2157 aaKnown RBP12.57□□□□□ -0.4
CCDC43-202ENST00000457422 MED14OSP0DP75 135 aa12.57□□□□□ -0.4
CCDC43-202ENST00000457422 GATA1P15976 413 aaPredicted RBP12.57□□□□□ -0.4
CCDC43-202ENST00000457422 MYOZ3Q8TDC0 251 aa12.57□□□□□ -0.4
CCDC43-202ENST00000457422 ID1P41134 155 aa12.57□□□□□ -0.4
CCDC43-202ENST00000457422 OR2K2Q8NGT1 345 aa12.57□□□□□ -0.4
CCDC43-202ENST00000457422 IGLV2-18A0A075B6J9 118 aa12.56□□□□□ -0.4
CCDC43-202ENST00000457422 ELANEP08246 267 aa12.56□□□□□ -0.4
CCDC43-202ENST00000457422 SLC25A34Q6PIV7 304 aa12.56□□□□□ -0.4
CCDC43-202ENST00000457422 DPF1Q92782 380 aa12.56□□□□□ -0.4
CCDC43-202ENST00000457422 IFI27L1Q96BM0 104 aa12.56□□□□□ -0.4
CCDC43-202ENST00000457422 TP73-AS1Q9UF72 201 aa12.56□□□□□ -0.4
CCDC43-202ENST00000457422 FCER1GP30273 86 aa12.55□□□□□ -0.4
CCDC43-202ENST00000457422 STPG4Q8N801 248 aa12.55□□□□□ -0.4
CCDC43-202ENST00000457422 Q8N8P6 123 aa12.55□□□□□ -0.4
CCDC43-202ENST00000457422 NRACQ8N912 160 aa12.55□□□□□ -0.4
CCDC43-202ENST00000457422 ZNF702PQ9H963 129 aa12.55□□□□□ -0.4
CCDC43-202ENST00000457422 GOLT1BQ9Y3E0 138 aa12.55□□□□□ -0.4
CCDC43-202ENST00000457422 RNASE4P34096 147 aaKnown RBP12.55□□□□□ -0.4
CCDC43-202ENST00000457422 ASIPP42127 132 aa12.55□□□□□ -0.4
CCDC43-202ENST00000457422 KIR3DS1Q14943 382 aa12.55□□□□□ -0.4
CCDC43-202ENST00000457422 ABCA12Q86UK0 2595 aa12.55□□□□□ -0.4
CCDC43-202ENST00000457422 NAV2Q8IVL1 2488 aa12.54□□□□□ -0.4
CCDC43-202ENST00000457422 KLLNB2CW77 178 aa12.54□□□□□ -0.4
CCDC43-202ENST00000457422 ANXA2RQ3ZCQ2 193 aa12.54□□□□□ -0.4
CCDC43-202ENST00000457422 WFDC3Q8IUB2 231 aa12.54□□□□□ -0.4
CCDC43-202ENST00000457422 MRAP2Q96G30 205 aa12.54□□□□□ -0.4
CCDC43-202ENST00000457422 EPG5Q9HCE0 2579 aa12.54□□□□□ -0.4
CCDC43-202ENST00000457422 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
CCDC43-202ENST00000457422 LGALS1P09382 135 aaKnown RBP12.53□□□□□ -0.4
CCDC43-202ENST00000457422 RNF152Q8N8N0 203 aa12.53□□□□□ -0.4
CCDC43-202ENST00000457422 TRAV26-2A0A0B4J265 109 aa12.53□□□□□ -0.4
CCDC43-202ENST00000457422 LGALS9O00182 355 aa12.53□□□□□ -0.4
CCDC43-202ENST00000457422 Q96MF0 132 aa12.53□□□□□ -0.4
CCDC43-202ENST00000457422 SPRY2O43597 315 aa12.52□□□□□ -0.4
CCDC43-202ENST00000457422 S100A4P26447 101 aaKnown RBP12.52□□□□□ -0.4
CCDC43-202ENST00000457422 LEPP41159 167 aa12.52□□□□□ -0.4
CCDC43-202ENST00000457422 COX8AP10176 69 aa12.52□□□□□ -0.41
CCDC43-202ENST00000457422 HINT1P49773 126 aaPredicted RBP12.52□□□□□ -0.41
CCDC43-202ENST00000457422 UBE2E2Q96LR5 201 aa12.52□□□□□ -0.41
CCDC43-202ENST00000457422 ZNF25P17030 456 aaPredicted RBP12.51□□□□□ -0.41
CCDC43-202ENST00000457422 TFPI2P48307 235 aa12.51□□□□□ -0.41
CCDC43-202ENST00000457422 OR1N2Q8NGR9 330 aa12.51□□□□□ -0.41
CCDC43-202ENST00000457422 ODF3Q96PU9 254 aa12.51□□□□□ -0.41
CCDC43-202ENST00000457422 PHLDA3Q9Y5J5 127 aa12.51□□□□□ -0.41
CCDC43-202ENST00000457422 IGHV4OR15-8A0A075B7B6 117 aa12.5□□□□□ -0.41
CCDC43-202ENST00000457422 A0A087WW49 117 aa12.5□□□□□ -0.41
CCDC43-202ENST00000457422 RNASE3P12724 160 aaKnown RBP12.5□□□□□ -0.41
CCDC43-202ENST00000457422 DPH3P1Q9H4G8 78 aa12.5□□□□□ -0.41
CCDC43-202ENST00000457422 CREBBPQ92793 2442 aa12.5□□□□□ -0.41
CCDC43-202ENST00000457422 M0R381 172 aa12.5□□□□□ -0.41
CCDC43-202ENST00000457422 SYNJ2BPP57105 145 aa12.5□□□□□ -0.41
CCDC43-202ENST00000457422 GAGE1Q13065 139 aa12.5□□□□□ -0.41
CCDC43-202ENST00000457422 KRTAP1-3Q8IUG1 177 aa12.5□□□□□ -0.41
CCDC43-202ENST00000457422 TMEM208Q9BTX3 173 aa12.5□□□□□ -0.41
CCDC43-202ENST00000457422 MXRA5Q9NR99 2828 aa12.5□□□□□ -0.41
CCDC43-202ENST00000457422 K7EQG2 157 aa12.49□□□□□ -0.41
CCDC43-202ENST00000457422 NXPH4O95158 308 aa12.49□□□□□ -0.41
CCDC43-202ENST00000457422 G0S2P27469 103 aa12.49□□□□□ -0.41
CCDC43-202ENST00000457422 Q8N2B8 174 aa12.49□□□□□ -0.41
CCDC43-202ENST00000457422 TMEM158Q8WZ71 300 aa12.49□□□□□ -0.41
CCDC43-202ENST00000457422 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
CCDC43-202ENST00000457422 GNRH2O43555 120 aa12.49□□□□□ -0.41
CCDC43-202ENST00000457422 C18orf15Q96N68 181 aa12.49□□□□□ -0.41
CCDC43-202ENST00000457422 DLEU1O43261 78 aa12.48□□□□□ -0.41
CCDC43-202ENST00000457422 CD5LO43866 347 aa12.48□□□□□ -0.41
CCDC43-202ENST00000457422 ZNF688P0C7X2 276 aa12.48□□□□□ -0.41
CCDC43-202ENST00000457422 SNRPD3P62318 126 aaKnown RBP12.48□□□□□ -0.41
CCDC43-202ENST00000457422 LAGE3Q14657 143 aa12.48□□□□□ -0.41
CCDC43-202ENST00000457422 ANKRD39Q53RE8 183 aa12.48□□□□□ -0.41
CCDC43-202ENST00000457422 DUX5Q96PT3 197 aa12.48□□□□□ -0.41
CCDC43-202ENST00000457422 HOXD3P31249 432 aaPredicted RBP12.47□□□□□ -0.41
CCDC43-202ENST00000457422 PSMG4Q5JS54 123 aa12.47□□□□□ -0.41
CCDC43-202ENST00000457422 WFDC12Q8WWY7 111 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms