RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TLN2Q9Y4G6 2542 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 LINC01549A6NIU2 74 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 H3BMM0 161 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 ZNF324O75467 553 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 ARMS2P0C7Q2 107 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 ZNF688P0C7X2 276 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 CAMPP49913 170 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 NUTF2P61970 127 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 SLAQ13239 276 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 BEAN1Q3B7T3 259 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 MORN3Q6PF18 240 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 C18orf65Q6ZTR6 163 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 ZNF575Q86XF7 245 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 ORMDL3Q8N138 153 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 GSN-AS1Q9NRJ2 163 aa5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 ZMAT5Q9UDW3 170 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-210ENST00000454859 M0R381 172 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 SRIP30626 198 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 DEFB136Q30KP8 78 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 ANXA2RQ3ZCQ2 193 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 CD300EQ496F6 205 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 GDF5OSQ5U4N7 250 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 POM121L12Q8N7R1 296 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 SYT8Q8NBV8 401 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 C18orf32Q8TCD1 76 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 HIST1H2BLQ99880 126 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 SMR3AQ99954 134 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 MAP6D1Q9H9H5 199 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 LINC01546A6NGU7 62 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 OR11H12B2RN74 326 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 WIPF1O43516 503 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 RNASE4P34096 147 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 RPL32P62910 135 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 TWIST1Q15672 202 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 C9orf66Q5T8R8 295 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 LINC00518Q8N0U6 118 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 CITED1Q99966 193 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 C1QTNF4Q9BXJ3 329 aa5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 MAP1AP78559 2803 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-210ENST00000454859 CIDEAO60543 219 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 GZMBP10144 247 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 NTF3P20783 257 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 S100A4P26447 101 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 G0S2P27469 103 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 S100A12P80511 92 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 WFDC3Q8IUB2 231 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 LINC00482Q8N8I6 264 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 SPXQ9BT56 116 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 SONP18583 2426 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 IGHV1OR15-1A0A075B7D0 117 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 TCAPO15273 167 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 SPINK4O60575 86 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 PF4P02776 101 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 DEFB131AP59861 70 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 SPANXN1Q5VSR9 72 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 C9orf85Q96MD7 179 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 AP1S3Q96PC3 154 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 EDA2RQ9HAV5 297 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 NXT2Q9NPJ8 142 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 C11orf21Q9P2W6 132 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 NAGKQ9UJ70 344 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 PHLDA3Q9Y5J5 127 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 ACANP16112 2415 aa5.07□□□□□ -1.6
ECHDC1-210ENST00000454859 INSP01308 110 aa5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 JOSD1Q15040 202 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 PRR9Q5T870 116 aa5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 GFI1BQ5VTD9 330 aa5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 C20orf78Q9BR46 151 aa5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 DPH3P1Q9H4G8 78 aa5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 CELSR1Q9NYQ6 3014 aa5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 IGKV3-7A0A075B6H7 116 aa5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 SERF1AO75920 110 aa5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 LINC00614P0C842 121 aa5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 TRPT1Q86TN4 253 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 STHQ8IWL8 128 aa5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 WFDC9Q8NEX5 89 aa5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 TEP1Q99973 2627 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-210ENST00000454859 TMSB15BA0A087X1C1 80 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 IGHV3-16A0A0C4DH30 117 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 IFITM10A6NMD0 228 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 F6UB75 175 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 LCE2BO14633 110 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 SAP30O75446 220 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 HSBP1O75506 76 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 EDN2P20800 178 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 CKS2P33552 79 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 TFPI2P48307 235 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 IQCJQ1A5X6 159 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 MRPL51Q4U2R6 128 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 PRELID3AQ96N28 172 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 TPPP3Q9BW30 176 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 SAMD10Q9BYL1 202 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 MAP1LC3AQ9H492 121 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 VPS13CQ709C8 3753 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 A0A1W2PRX2 142 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 RNASE3P12724 160 aaKnown RBP5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 FABP4P15090 132 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 ZNF415Q09FC8 603 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 ODF3L2Q3SX64 289 aa5.05□□□□□ -1.6
ECHDC1-210ENST00000454859 TMEM158Q8WZ71 300 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms