RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 A0A087X0K7 114 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 TSPOP30536 169 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 SPATA12Q7Z6I5 190 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 RHPN1-AS1Q9BWJ2 59 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 SIGLEC8Q9NYZ4 499 aa9.24□□□□□ -0.93
SMPD4-213ENST00000454468 TRBV7-1A0A0A6YYK4 115 aa9.23□□□□□ -0.93
SMPD4-213ENST00000454468 LEPP41159 167 aa9.23□□□□□ -0.93
SMPD4-213ENST00000454468 MPV17L2Q567V2 206 aa9.23□□□□□ -0.93
SMPD4-213ENST00000454468 GAS8-AS1O95177 125 aa9.23□□□□□ -0.93
SMPD4-213ENST00000454468 FAM104BQ5XKR9 115 aa9.23□□□□□ -0.93
SMPD4-213ENST00000454468 Q8N6K4 173 aa9.23□□□□□ -0.93
SMPD4-213ENST00000454468 SLC50A1Q9BRV3 221 aa9.23□□□□□ -0.93
SMPD4-213ENST00000454468 USP24Q9UPU5 2620 aa9.23□□□□□ -0.93
SMPD4-213ENST00000454468 RAB9AP51151 201 aa9.23□□□□□ -0.93
SMPD4-213ENST00000454468 CHCHD1Q96BP2 118 aaKnown RBP9.23□□□□□ -0.93
SMPD4-213ENST00000454468 B4DSR2 109 aa9.22□□□□□ -0.93
SMPD4-213ENST00000454468 AVPP01185 164 aa9.22□□□□□ -0.93
SMPD4-213ENST00000454468 ESDP10768 282 aa9.22□□□□□ -0.93
SMPD4-213ENST00000454468 C10orf105Q8TEF2 133 aa9.22□□□□□ -0.93
SMPD4-213ENST00000454468 URB1-AS1Q96HZ7 61 aa9.22□□□□□ -0.93
SMPD4-213ENST00000454468 KIR3DS1Q14943 382 aa9.22□□□□□ -0.93
SMPD4-213ENST00000454468 Q6AWC8 147 aa9.22□□□□□ -0.93
SMPD4-213ENST00000454468 RAB37Q96AX2 223 aa9.22□□□□□ -0.93
SMPD4-213ENST00000454468 RPS20P60866 119 aaKnown RBP9.22□□□□□ -0.93
SMPD4-213ENST00000454468 DEFB112Q30KQ8 113 aa9.22□□□□□ -0.93
SMPD4-213ENST00000454468 C14orf178Q8N769 122 aaPredicted RBP9.22□□□□□ -0.93
SMPD4-213ENST00000454468 DUX3Q96PT4 197 aa9.22□□□□□ -0.93
SMPD4-213ENST00000454468 AGRNO00468 2067 aa9.21□□□□□ -0.93
SMPD4-213ENST00000454468 C2orf70A6NJV1 201 aa9.21□□□□□ -0.93
SMPD4-213ENST00000454468 EDN2P20800 178 aa9.21□□□□□ -0.93
SMPD4-213ENST00000454468 TMEM160Q9NX00 188 aa9.21□□□□□ -0.93
SMPD4-213ENST00000454468 SMIM17P0DL12 118 aa9.21□□□□□ -0.94
SMPD4-213ENST00000454468 MRPS12O15235 138 aaKnown RBP9.2□□□□□ -0.94
SMPD4-213ENST00000454468 KLF5Q13887 457 aaPredicted RBP9.2□□□□□ -0.94
SMPD4-213ENST00000454468 FOXC2Q99958 501 aa9.2□□□□□ -0.94
SMPD4-213ENST00000454468 FAM231BA6NCW3 169 aa9.2□□□□□ -0.94
SMPD4-213ENST00000454468 PSMG4Q5JS54 123 aa9.2□□□□□ -0.94
SMPD4-213ENST00000454468 SYNJ2BPP57105 145 aa9.2□□□□□ -0.94
SMPD4-213ENST00000454468 EBI3Q14213 229 aa9.2□□□□□ -0.94
SMPD4-213ENST00000454468 CELSR2Q9HCU4 2923 aa9.2□□□□□ -0.94
SMPD4-213ENST00000454468 TRAV12-2A0A075B6T6 113 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 TRAV12-3A0A0B4J271 114 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 A0A1W2PRX2 142 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 Q8N976 141 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 IFI27L1Q96BM0 104 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 ZFAND3Q9H8U3 227 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 HBDP02042 147 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 PAX2Q02962 417 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 DEFB136Q30KP8 78 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 HIST2H2BCQ6DN03 193 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 NEGR1Q7Z3B1 354 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 HECTD1Q9ULT8 2610 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 GNRH2O43555 120 aa9.19□□□□□ -0.94
SMPD4-213ENST00000454468 TEX15Q9BXT5 2789 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 TRAV26-1A0A087WT03 109 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 TNFRSF6BO95407 300 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 CKS1BP61024 79 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 AJUBAQ96IF1 538 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 TRAV8-6A0A0B4J262 113 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 A0A0G2JLM5 398 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 NPIPB6E9PJ23 425 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 CD7P09564 240 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 TMEM158Q8WZ71 300 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 DPF1Q92782 380 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 TTTY13Q9BZ97 58 aa9.18□□□□□ -0.94
SMPD4-213ENST00000454468 A0A087WWL8 130 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 A0A1B0GW15 77 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 FAM159AQ6UWV7 190 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 MYOZ3Q8TDC0 251 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 IGHV3OR16-12A0A075B7B8 117 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 IGKV3D-20A0A0C4DH25 116 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 AZU1P20160 251 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 LINC00477Q96M19 166 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 ZNF747Q9BV97 191 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 C11orf21Q9P2W6 132 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 DKK2Q9UBU2 259 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 CLPSL1A2RUU4 121 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 ASIPP42127 132 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 PET117Q6UWS5 81 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 C20orf173Q96LM9 149 aa9.17□□□□□ -0.94
SMPD4-213ENST00000454468 ZNF48Q96MX3 618 aaPredicted RBP9.17□□□□□ -0.94
SMPD4-213ENST00000454468 FAM223BA6NKX1 122 aa9.16□□□□□ -0.94
SMPD4-213ENST00000454468 ANXA2RQ3ZCQ2 193 aa9.16□□□□□ -0.94
SMPD4-213ENST00000454468 FAM223AQ8IWN6 122 aa9.16□□□□□ -0.94
SMPD4-213ENST00000454468 EMP1P54849 157 aa9.16□□□□□ -0.94
SMPD4-213ENST00000454468 GTSCR1Q86UQ5 136 aa9.16□□□□□ -0.94
SMPD4-213ENST00000454468 FLNAP21333 2647 aaKnown RBP9.16□□□□□ -0.94
SMPD4-213ENST00000454468 IGHG4P01861 327 aa9.16□□□□□ -0.94
SMPD4-213ENST00000454468 CRYBA4P53673 196 aa9.16□□□□□ -0.94
SMPD4-213ENST00000454468 PEF1Q9UBV8 284 aaKnown RBP9.16□□□□□ -0.94
SMPD4-213ENST00000454468 C9orf139Q6ZV77 190 aa9.15□□□□□ -0.94
SMPD4-213ENST00000454468 SIGMAR1Q99720 223 aa9.15□□□□□ -0.94
SMPD4-213ENST00000454468 DAZ1Q9NQZ3 744 aaKnown RBP9.15□□□□□ -0.94
SMPD4-213ENST00000454468 IGHV3-73A0A0B4J1V6 119 aa9.15□□□□□ -0.95
SMPD4-213ENST00000454468 GCSHP23434 173 aa9.15□□□□□ -0.95
SMPD4-213ENST00000454468 ID1P41134 155 aa9.15□□□□□ -0.95
SMPD4-213ENST00000454468 PIFOQ8TCI5 191 aa9.15□□□□□ -0.95
SMPD4-213ENST00000454468 ATP6V0BQ99437 205 aa9.15□□□□□ -0.95
SMPD4-213ENST00000454468 KLK9Q9UKQ9 250 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms