RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 DNAJB13P59910 316 aa1.37□□□□□ -2.19
HMGN3P1-201ENST00000453847 NCS1P62166 190 aa1.37□□□□□ -2.19
HMGN3P1-201ENST00000453847 PLPP5Q8NEB5 264 aa1.37□□□□□ -2.19
HMGN3P1-201ENST00000453847 ODF3Q96PU9 254 aa1.37□□□□□ -2.19
HMGN3P1-201ENST00000453847 C22orf24Q9Y442 160 aa1.37□□□□□ -2.19
HMGN3P1-201ENST00000453847 FOCADQ5VW36 1801 aa1.37□□□□□ -2.19
HMGN3P1-201ENST00000453847 MYOM3Q5VTT5 1437 aa1.37□□□□□ -2.19
HMGN3P1-201ENST00000453847 PLXNA2O75051 1894 aa1.37□□□□□ -2.19
HMGN3P1-201ENST00000453847 KIF13AQ9H1H9 1805 aa1.36□□□□□ -2.19
HMGN3P1-201ENST00000453847 COL6A6A6NMZ7 2263 aa1.36□□□□□ -2.19
HMGN3P1-201ENST00000453847 K7EP13 123 aa1.36□□□□□ -2.19
HMGN3P1-201ENST00000453847 K7ERU9 68 aa1.36□□□□□ -2.19
HMGN3P1-201ENST00000453847 IGF2P01344 180 aa1.36□□□□□ -2.19
HMGN3P1-201ENST00000453847 PDE6GP18545 87 aa1.36□□□□□ -2.19
HMGN3P1-201ENST00000453847 KRTAP10-4P60372 401 aaPredicted RBP1.36□□□□□ -2.19
HMGN3P1-201ENST00000453847 PLGLB1Q02325 96 aa1.36□□□□□ -2.19
HMGN3P1-201ENST00000453847 LINC00299Q6ZSB3 139 aa1.36□□□□□ -2.19
HMGN3P1-201ENST00000453847 MMGT1Q8N4V1 131 aa1.36□□□□□ -2.19
HMGN3P1-201ENST00000453847 VPS25Q9BRG1 176 aa1.36□□□□□ -2.19
HMGN3P1-201ENST00000453847 FLG2Q5D862 2391 aaPredicted RBP1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 TRBV20-1A0A075B6N2 111 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 TRAV23DV6A0A075B6W5 121 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 IGLV3-32A0A0A0MS00 114 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 A0A1W2PPB8 328 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 A0A1W2PRS3 328 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 KIR3DP1A8MWS1 328 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 M0R2P5 195 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 IGKCP01834 107 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 PRB4P10163 310 aaPredicted RBP1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 SNX29P2Q8IUI4 249 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 SDF2Q99470 211 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 TSC22D3Q99576 134 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 PAIP2BQ9ULR5 123 aaKnown RBP1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 UHRF1BP1LA0JNW5 1464 aa1.35□□□□□ -2.19
HMGN3P1-201ENST00000453847 MUC6Q6W4X9 2439 aa1.34□□□□□ -2.19
HMGN3P1-201ENST00000453847 NUPR2A6NF83 97 aa1.34□□□□□ -2.19
HMGN3P1-201ENST00000453847 BBIP1A8MTZ0 92 aa1.34□□□□□ -2.19
HMGN3P1-201ENST00000453847 PEG3Q9GZU2 1588 aa1.34□□□□□ -2.2
HMGN3P1-201ENST00000453847 PTPRMP28827 1452 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 GRIN2AQ12879 1464 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 J3QR89 54 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 SULT1C4O75897 302 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 IGHV3-30P01768 117 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 IGHV3-30-5P0DP03 117 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 IL7P13232 177 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 KRTAP21-3Q3LHN1 58 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 OCIAD2Q56VL3 154 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 C3orf62Q6ZUJ4 267 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 SLC25A26Q70HW3 274 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 ATP6V0E2Q8NHE4 81 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 ZGRF1Q86YA3 2104 aa1.33□□□□□ -2.2
HMGN3P1-201ENST00000453847 RBP4P02753 201 aa1.32□□□□□ -2.2
HMGN3P1-201ENST00000453847 ANGP03950 147 aaKnown RBP1.32□□□□□ -2.2
HMGN3P1-201ENST00000453847 RPL37AP61513 92 aaKnown RBP1.32□□□□□ -2.2
HMGN3P1-201ENST00000453847 COPZ1P61923 177 aa1.32□□□□□ -2.2
HMGN3P1-201ENST00000453847 MIC13Q5XKP0 118 aa1.32□□□□□ -2.2
HMGN3P1-201ENST00000453847 LYPD5Q6UWN5 251 aa1.32□□□□□ -2.2
HMGN3P1-201ENST00000453847 ATP11AUNQ6ZP68 121 aa1.32□□□□□ -2.2
HMGN3P1-201ENST00000453847 IDO2Q6ZQW0 420 aa1.32□□□□□ -2.2
HMGN3P1-201ENST00000453847 MRPL57Q9BQC6 102 aaKnown RBP1.32□□□□□ -2.2
HMGN3P1-201ENST00000453847 NOP16Q9Y3C1 178 aaKnown RBP1.32□□□□□ -2.2
HMGN3P1-201ENST00000453847 AKAP11Q9UKA4 1901 aa1.32□□□□□ -2.2
HMGN3P1-201ENST00000453847 GNG7O60262 68 aa1.31□□□□□ -2.2
HMGN3P1-201ENST00000453847 TFF1P04155 84 aa1.31□□□□□ -2.2
HMGN3P1-201ENST00000453847 EFNA4P52798 201 aa1.31□□□□□ -2.2
HMGN3P1-201ENST00000453847 SPATA45Q537H7 98 aa1.31□□□□□ -2.2
HMGN3P1-201ENST00000453847 NCOA3Q9Y6Q9 1424 aa1.31□□□□□ -2.2
HMGN3P1-201ENST00000453847 CXorf51AA0A1B0GTR3 108 aa1.3□□□□□ -2.2
HMGN3P1-201ENST00000453847 TMEM30CPA0ZSE6 113 aa1.3□□□□□ -2.2
HMGN3P1-201ENST00000453847 EFCAB10A6NFE3 127 aa1.3□□□□□ -2.2
HMGN3P1-201ENST00000453847 RHOHQ15669 191 aa1.3□□□□□ -2.2
HMGN3P1-201ENST00000453847 Q6ZUT4 128 aa1.3□□□□□ -2.2
HMGN3P1-201ENST00000453847 AMELYQ99218 206 aa1.3□□□□□ -2.2
HMGN3P1-201ENST00000453847 LINC00470Q9BZP3 86 aa1.3□□□□□ -2.2
HMGN3P1-201ENST00000453847 IBTKQ9P2D0 1353 aaPredicted RBP1.3□□□□□ -2.2
HMGN3P1-201ENST00000453847 NINQ8N4C6 2090 aa1.3□□□□□ -2.2
HMGN3P1-201ENST00000453847 MUC22E2RYF6 1773 aaPredicted RBP1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 CITO14578 2027 aa1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 TRAV17A0A0B4J275 112 aa1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 NBDYA0A0U1RRE5 68 aa1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 J3QLW9 94 aa1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 TPST1O60507 370 aa1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 YPEL1O60688 119 aa1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 FXYD4P59646 89 aa1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 RRAS2P62070 204 aaPredicted RBP1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 IQCJQ1A5X6 159 aa1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 TAS2R8Q9NYW2 309 aa1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 MRPL36Q9P0J6 103 aaKnown RBP1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 CDK12Q9NYV4 1490 aaPredicted RBP1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 MBD5Q9P267 1494 aa1.29□□□□□ -2.2
HMGN3P1-201ENST00000453847 A0A0G2JMM0 328 aa1.28□□□□□ -2.2
HMGN3P1-201ENST00000453847 A0A1B0GV90 55 aa1.28□□□□□ -2.2
HMGN3P1-201ENST00000453847 GYPBP06028 91 aa1.28□□□□□ -2.2
HMGN3P1-201ENST00000453847 DYNLRB2Q8TF09 96 aa1.28□□□□□ -2.2
HMGN3P1-201ENST00000453847 ARL11Q969Q4 196 aa1.28□□□□□ -2.2
HMGN3P1-201ENST00000453847 TMEM2Q9UHN6 1383 aa1.28□□□□□ -2.2
HMGN3P1-201ENST00000453847 DLEC1Q9Y238 1755 aa1.28□□□□□ -2.2
HMGN3P1-201ENST00000453847 ROS1P08922 2347 aa1.27□□□□□ -2.21
HMGN3P1-201ENST00000453847 NCR3O14931 201 aa1.27□□□□□ -2.21
HMGN3P1-201ENST00000453847 POLR2JP52435 117 aaKnown RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms