RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 AGPAT4-IT1Q9H0P7 198 aa10.78□□□□□ -0.68
UBE2D3-210ENST00000453744 GEMIN7Q9H840 131 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-210ENST00000453744 UBTD1Q9HAC8 227 aa10.78□□□□□ -0.68
UBE2D3-210ENST00000453744 HIVEP3Q5T1R4 2406 aa10.77□□□□□ -0.68
UBE2D3-210ENST00000453744 RNASE4P34096 147 aaKnown RBP10.77□□□□□ -0.68
UBE2D3-210ENST00000453744 RRN3P1Q2M238 152 aa10.77□□□□□ -0.68
UBE2D3-210ENST00000453744 KLHL30-AS1Q8NEE0 82 aa10.77□□□□□ -0.68
UBE2D3-210ENST00000453744 ADGRG4Q8IZF6 3080 aa10.77□□□□□ -0.68
UBE2D3-210ENST00000453744 G3V318 75 aa10.77□□□□□ -0.69
UBE2D3-210ENST00000453744 PRSS2P07478 247 aa10.77□□□□□ -0.69
UBE2D3-210ENST00000453744 PRTN3P24158 256 aa10.77□□□□□ -0.69
UBE2D3-210ENST00000453744 CFAP47Q6ZTR5 3102 aa10.77□□□□□ -0.69
UBE2D3-210ENST00000453744 SRD5A1P18405 259 aa10.77□□□□□ -0.69
UBE2D3-210ENST00000453744 OR10J6PQ8NGY7 276 aa10.77□□□□□ -0.69
UBE2D3-210ENST00000453744 DLX4Q92988 240 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-210ENST00000453744 DEFB1P60022 68 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 MRGPRG-AS1Q2M3A8 158 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 IGFL2Q6UWQ7 119 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 ZNF256Q9Y2P7 627 aaPredicted RBP10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 MYMXA0A1B0GTQ4 84 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 WI2-2373I1.2A0A1W2PRP0 233 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 RAX2Q96IS3 184 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 FANCD2OSQ96PS1 177 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 ZFHX4Q86UP3 3567 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 A0A087WX48 190 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 F8VRH5 84 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 IGHV3-11P01762 117 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 PLA2G2CQ5R387 149 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 CLUHP3Q96NS8 147 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 SPANXB1Q9NS25 103 aaPredicted RBP10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 KAAG1Q9UBP8 84 aa10.76□□□□□ -0.69
UBE2D3-210ENST00000453744 C8orf31Q8N9H6 132 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 RNF185Q96GF1 192 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 SRSF8Q9BRL6 282 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 CRYGBP07316 175 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 CTSGP08311 255 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 C2orf66Q6UXQ4 117 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 HIGD1BQ9P298 99 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 LRRK2Q5S007 2527 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 NACAE9PAV3 2078 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 ORMDL2Q53FV1 153 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 RPL39LQ96EH5 51 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 RNF5Q99942 180 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 ASIPP42127 132 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 Q6ZQT7 251 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 VMO1Q7Z5L0 202 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 SLC50A1Q9BRV3 221 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 HHLA3Q9XRX5 114 aa10.75□□□□□ -0.69
UBE2D3-210ENST00000453744 TRAV26-1A0A087WT03 109 aa10.74□□□□□ -0.69
UBE2D3-210ENST00000453744 TACC2O95359 2948 aa10.74□□□□□ -0.69
UBE2D3-210ENST00000453744 TRAV8-2A0A0B4J237 113 aa10.74□□□□□ -0.69
UBE2D3-210ENST00000453744 TRBV6-1A0A0K0K1D8 114 aa10.74□□□□□ -0.69
UBE2D3-210ENST00000453744 KALRNO60229 2985 aa10.74□□□□□ -0.69
UBE2D3-210ENST00000453744 IGLC6P0CF74 106 aa10.74□□□□□ -0.69
UBE2D3-210ENST00000453744 TMEM219Q86XT9 240 aa10.74□□□□□ -0.69
UBE2D3-210ENST00000453744 U3KQK5 164 aa10.74□□□□□ -0.69
UBE2D3-210ENST00000453744 E9PLD3 99 aa10.74□□□□□ -0.69
UBE2D3-210ENST00000453744 LGALS3P17931 250 aaKnown RBP10.74□□□□□ -0.69
UBE2D3-210ENST00000453744 SMIM2Q9BVW6 85 aa10.74□□□□□ -0.69
UBE2D3-210ENST00000453744 SUMO2P61956 95 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-210ENST00000453744 ANXA2RQ3ZCQ2 193 aa10.73□□□□□ -0.69
UBE2D3-210ENST00000453744 FLNBO75369 2602 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-210ENST00000453744 IGLV11-55A0A075B6I3 123 aa10.73□□□□□ -0.69
UBE2D3-210ENST00000453744 TRAV2A0A0B4J234 112 aa10.73□□□□□ -0.69
UBE2D3-210ENST00000453744 IGKV3D-20A0A0C4DH25 116 aa10.73□□□□□ -0.69
UBE2D3-210ENST00000453744 SHISA9B4DS77 424 aa10.73□□□□□ -0.69
UBE2D3-210ENST00000453744 C1orf122Q6ZSJ8 110 aa10.73□□□□□ -0.69
UBE2D3-210ENST00000453744 NAV2Q8IVL1 2488 aa10.73□□□□□ -0.69
UBE2D3-210ENST00000453744 A8MWV9 139 aa10.72□□□□□ -0.69
UBE2D3-210ENST00000453744 CCL21O00585 134 aa10.72□□□□□ -0.69
UBE2D3-210ENST00000453744 EEF1AKMT3Q96AZ1 226 aa10.72□□□□□ -0.69
UBE2D3-210ENST00000453744 ANAPC13Q9BS18 74 aa10.72□□□□□ -0.69
UBE2D3-210ENST00000453744 USP9XQ93008 2570 aaPredicted RBP10.72□□□□□ -0.69
UBE2D3-210ENST00000453744 PRSS29PA6NIE9 313 aa10.72□□□□□ -0.69
UBE2D3-210ENST00000453744 IGHV4-39P01824 125 aa10.72□□□□□ -0.69
UBE2D3-210ENST00000453744 POLQO75417 2590 aa10.71□□□□□ -0.69
UBE2D3-210ENST00000453744 A0A087WWL8 130 aa10.71□□□□□ -0.69
UBE2D3-210ENST00000453744 GRNP28799 593 aaKnown RBP10.71□□□□□ -0.69
UBE2D3-210ENST00000453744 LY6EQ16553 131 aa10.71□□□□□ -0.69
UBE2D3-210ENST00000453744 KIR2DL4Q99706 377 aa10.71□□□□□ -0.69
UBE2D3-210ENST00000453744 ATP6V0E1O15342 81 aa10.71□□□□□ -0.69
UBE2D3-210ENST00000453744 ZFP2Q6ZN57 461 aa10.71□□□□□ -0.69
UBE2D3-210ENST00000453744 C8orf86Q6ZUL3 223 aa10.71□□□□□ -0.69
UBE2D3-210ENST00000453744 TM2D2Q9BX73 214 aa10.71□□□□□ -0.69
UBE2D3-210ENST00000453744 HOXB4P17483 251 aaPredicted RBP10.71□□□□□ -0.7
UBE2D3-210ENST00000453744 C16orf54Q6UWD8 224 aa10.71□□□□□ -0.7
UBE2D3-210ENST00000453744 PF4V1P10720 104 aa10.7□□□□□ -0.7
UBE2D3-210ENST00000453744 SMAD5-AS1Q9Y6J3 95 aa10.7□□□□□ -0.7
UBE2D3-210ENST00000453744 F6UB75 175 aa10.7□□□□□ -0.7
UBE2D3-210ENST00000453744 LINC01559Q495D7 138 aa10.7□□□□□ -0.7
UBE2D3-210ENST00000453744 MRAP2Q96G30 205 aa10.7□□□□□ -0.7
UBE2D3-210ENST00000453744 C11orf21Q9P2W6 132 aa10.7□□□□□ -0.7
UBE2D3-210ENST00000453744 ZNF56Q15929 161 aa10.69□□□□□ -0.7
UBE2D3-210ENST00000453744 C9JAW5 83 aa10.69□□□□□ -0.7
UBE2D3-210ENST00000453744 MRPS12O15235 138 aaKnown RBP10.69□□□□□ -0.7
UBE2D3-210ENST00000453744 DPH3P1Q9H4G8 78 aa10.69□□□□□ -0.7
UBE2D3-210ENST00000453744 IGF1P05019 195 aa10.69□□□□□ -0.7
UBE2D3-210ENST00000453744 TEX29Q8N6K0 151 aa10.69□□□□□ -0.7
UBE2D3-210ENST00000453744 TP53TG1Q9Y2A0 90 aa10.69□□□□□ -0.7
UBE2D3-210ENST00000453744 TRAV21A0A0B4J279 112 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms