RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 TREM1Q9NP99 234 aa18.39■□□□□ 0.53
USP42-204ENST00000451154 PTTG2Q9NZH5 202 aa18.39■□□□□ 0.53
USP42-204ENST00000451154 TRAV21A0A0B4J279 112 aa18.38■□□□□ 0.53
USP42-204ENST00000451154 LOC100131303A0A0U1RQF7 123 aa18.38■□□□□ 0.53
USP42-204ENST00000451154 DNAH10OSP0CZ25 163 aa18.38■□□□□ 0.53
USP42-204ENST00000451154 DEFA1P59665 94 aa18.38■□□□□ 0.53
USP42-204ENST00000451154 DEFA3P59666 94 aa18.38■□□□□ 0.53
USP42-204ENST00000451154 MSRB1Q9NZV6 116 aa18.38■□□□□ 0.53
USP42-204ENST00000451154 TYMSP04818 313 aa18.37■□□□□ 0.53
USP42-204ENST00000451154 EVI2AP22794 236 aa18.37■□□□□ 0.53
USP42-204ENST00000451154 OR10G9Q8NGN4 311 aa18.37■□□□□ 0.53
USP42-204ENST00000451154 OR10G7Q8NGN6 311 aa18.37■□□□□ 0.53
USP42-204ENST00000451154 SGK494Q96LW2 274 aa18.37■□□□□ 0.53
USP42-204ENST00000451154 TXNDC17Q9BRA2 123 aa18.37■□□□□ 0.53
USP42-204ENST00000451154 A0A087WTM6 91 aa18.36■□□□□ 0.53
USP42-204ENST00000451154 C9JCJ5 164 aa18.36■□□□□ 0.53
USP42-204ENST00000451154 ARL6IP6Q8N6S5 226 aa18.36■□□□□ 0.53
USP42-204ENST00000451154 SDF2L1Q9HCN8 221 aa18.34■□□□□ 0.53
USP42-204ENST00000451154 CDPF1Q6NVV7 123 aa18.33■□□□□ 0.52
USP42-204ENST00000451154 FAT1Q14517 4588 aa18.32■□□□□ 0.52
USP42-204ENST00000451154 K7EP13 123 aa18.32■□□□□ 0.52
USP42-204ENST00000451154 CRYGDP07320 174 aa18.32■□□□□ 0.52
USP42-204ENST00000451154 ARL14EPLP0DKL9 152 aa18.32■□□□□ 0.52
USP42-204ENST00000451154 XGP55808 180 aa18.32■□□□□ 0.52
USP42-204ENST00000451154 ASB13Q8WXK3 278 aa18.32■□□□□ 0.52
USP42-204ENST00000451154 KCNS1Q96KK3 526 aa18.32■□□□□ 0.52
USP42-204ENST00000451154 GATA1P15976 413 aaPredicted RBP18.31■□□□□ 0.52
USP42-204ENST00000451154 NHLRC2Q8NBF2 726 aa18.31■□□□□ 0.52
USP42-204ENST00000451154 EPM2AB3EWF7 344 aa18.3■□□□□ 0.52
USP42-204ENST00000451154 ZNF80P51504 273 aaPredicted RBP18.3■□□□□ 0.52
USP42-204ENST00000451154 KRTAP10-1P60331 282 aa18.3■□□□□ 0.52
USP42-204ENST00000451154 CDC34P49427 236 aaPredicted RBP18.29■□□□□ 0.52
USP42-204ENST00000451154 SH2D6Q7Z4S9 175 aa18.29■□□□□ 0.52
USP42-204ENST00000451154 HSD17B11Q8NBQ5 300 aa18.29■□□□□ 0.52
USP42-204ENST00000451154 C11orf21Q9P2W6 132 aa18.29■□□□□ 0.52
USP42-204ENST00000451154 STAG3L2P0CL84 134 aa18.28■□□□□ 0.52
USP42-204ENST00000451154 STAG3L3P0CL85 134 aa18.28■□□□□ 0.52
USP42-204ENST00000451154 ZNF876PQ49A33 203 aa18.28■□□□□ 0.52
USP42-204ENST00000451154 NDFIP1Q9BT67 221 aa18.28■□□□□ 0.52
USP42-204ENST00000451154 ALG5Q9Y673 324 aa18.28■□□□□ 0.52
USP42-204ENST00000451154 FBLL1A6NHQ2 334 aaKnown RBP18.27■□□□□ 0.52
USP42-204ENST00000451154 TCRAP04437 139 aa18.27■□□□□ 0.52
USP42-204ENST00000451154 PPT1P50897 306 aa18.27■□□□□ 0.52
USP42-204ENST00000451154 DPPA3Q6W0C5 159 aa18.27■□□□□ 0.52
USP42-204ENST00000451154 C10orf126Q8N4M7 172 aa18.27■□□□□ 0.52
USP42-204ENST00000451154 SLC25A29Q8N8R3 303 aa18.27■□□□□ 0.52
USP42-204ENST00000451154 RAB24Q969Q5 203 aa18.27■□□□□ 0.52
USP42-204ENST00000451154 GCHFRP30047 84 aa18.26■□□□□ 0.51
USP42-204ENST00000451154 TIRAPP58753 221 aa18.26■□□□□ 0.51
USP42-204ENST00000451154 OR2G3Q8NGZ4 309 aa18.26■□□□□ 0.51
USP42-204ENST00000451154 SUN5Q8TC36 379 aa18.26■□□□□ 0.51
USP42-204ENST00000451154 PSG8Q9UQ74 426 aa18.26■□□□□ 0.51
USP42-204ENST00000451154 IGHV3-73A0A0B4J1V6 119 aa18.25■□□□□ 0.51
USP42-204ENST00000451154 IGHV3-38A0A0C4DH36 116 aa18.25■□□□□ 0.51
USP42-204ENST00000451154 SERTM2A0A1B0GWG4 89 aa18.25■□□□□ 0.51
USP42-204ENST00000451154 CFAP126Q5VTH2 177 aa18.25■□□□□ 0.51
USP42-204ENST00000451154 C5orf17Q8NAS9 161 aa18.25■□□□□ 0.51
USP42-204ENST00000451154 TAAR5O14804 337 aa18.24■□□□□ 0.51
USP42-204ENST00000451154 RS1O15537 224 aa18.24■□□□□ 0.51
USP42-204ENST00000451154 GCGP01275 180 aa18.24■□□□□ 0.51
USP42-204ENST00000451154 PFN1P07737 140 aaKnown RBP18.24■□□□□ 0.51
USP42-204ENST00000451154 ATP6V0CP27449 155 aa18.24■□□□□ 0.51
USP42-204ENST00000451154 SUMO1P63165 101 aaKnown RBP18.24■□□□□ 0.51
USP42-204ENST00000451154 TMEM75Q8N9X5 138 aa18.24■□□□□ 0.51
USP42-204ENST00000451154 HERC1Q15751 4861 aa18.23■□□□□ 0.51
USP42-204ENST00000451154 K7EQM0 130 aa18.23■□□□□ 0.51
USP42-204ENST00000451154 IGLV2-11P01706 119 aa18.23■□□□□ 0.51
USP42-204ENST00000451154 GCSHP23434 173 aa18.22■□□□□ 0.51
USP42-204ENST00000451154 PRNTQ86SH4 94 aa18.22■□□□□ 0.51
USP42-204ENST00000451154 PRADC1Q9BSG0 188 aa18.22■□□□□ 0.51
USP42-204ENST00000451154 PSMG3Q9BT73 122 aaPredicted RBP18.22■□□□□ 0.51
USP42-204ENST00000451154 EPDR1Q9UM22 224 aa18.22■□□□□ 0.51
USP42-204ENST00000451154 VPS13BQ7Z7G8 4022 aa18.22■□□□□ 0.51
USP42-204ENST00000451154 PGPEP1LA6NFU8 196 aa18.21■□□□□ 0.51
USP42-204ENST00000451154 LINC01556Q5JQF7 62 aa18.21■□□□□ 0.51
USP42-204ENST00000451154 C9orf85Q96MD7 179 aa18.21■□□□□ 0.51
USP42-204ENST00000451154 SH3BGRL3Q9H299 93 aa18.21■□□□□ 0.51
USP42-204ENST00000451154 TRAV8-6A0A0B4J262 113 aa18.2■□□□□ 0.5
USP42-204ENST00000451154 GGTLC3B5MD39 225 aa18.2■□□□□ 0.5
USP42-204ENST00000451154 PSCAO43653 123 aa18.2■□□□□ 0.5
USP42-204ENST00000451154 MBP02144 154 aa18.2■□□□□ 0.5
USP42-204ENST00000451154 FLI1Q01543 452 aaPredicted RBP18.2■□□□□ 0.5
USP42-204ENST00000451154 SMUG1Q53HV7 270 aa18.2■□□□□ 0.5
USP42-204ENST00000451154 Q5BKY6 102 aa18.2■□□□□ 0.5
USP42-204ENST00000451154 OR10J3Q5JRS4 329 aa18.2■□□□□ 0.5
USP42-204ENST00000451154 AQP10Q96PS8 301 aa18.2■□□□□ 0.5
USP42-204ENST00000451154 TRBV6-4A0A1B0GX49 114 aa18.19■□□□□ 0.5
USP42-204ENST00000451154 LRCOL1A6NCL2 159 aa18.19■□□□□ 0.5
USP42-204ENST00000451154 CIDEAO60543 219 aa18.19■□□□□ 0.5
USP42-204ENST00000451154 SERF2P84101 59 aa18.19■□□□□ 0.5
USP42-204ENST00000451154 RHOHQ15669 191 aa18.19■□□□□ 0.5
USP42-204ENST00000451154 ZNF506Q5JVG8 444 aa18.19■□□□□ 0.5
USP42-204ENST00000451154 TMEM167BQ9NRX6 74 aa18.19■□□□□ 0.5
USP42-204ENST00000451154 IBA57-AS1B1ANH7 110 aa18.18■□□□□ 0.5
USP42-204ENST00000451154 CXorf1O96002 111 aa18.18■□□□□ 0.5
USP42-204ENST00000451154 IGHV3-30P01768 117 aa18.18■□□□□ 0.5
USP42-204ENST00000451154 IGHV3-33P01772 117 aa18.18■□□□□ 0.5
USP42-204ENST00000451154 INAFM2P0DMQ5 153 aa18.18■□□□□ 0.5
USP42-204ENST00000451154 IGHV3-30-3P0DP02 117 aa18.18■□□□□ 0.5
USP42-204ENST00000451154 IGHV3-30-5P0DP03 117 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms