RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 HIST1H2BOP23527 126 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 HIST1H2BBP33778 126 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 HIST1H2BDP58876 126 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 RHOBP62745 196 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 HIST1H2BCP62807 126 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 KIR3DS1Q14943 382 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 HIST2H2BEQ16778 126 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.92□□□□□ -1.3
LINC01238-204ENST00000451070 TMEM256Q8N2U0 113 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 HIST1H2BHQ93079 126 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 LINC01587Q99440 93 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 HIST1H2BNQ99877 126 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 HIST1H2BMQ99879 126 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 SMDT1Q9H4I9 107 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 ZNF331Q9NQX6 463 aaPredicted RBP6.92□□□□□ -1.3
LINC01238-204ENST00000451070 ABCA13Q86UQ4 5058 aa6.92□□□□□ -1.3
LINC01238-204ENST00000451070 FXYD6-FXYD2A0A087WZ82 144 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 NBDYA0A0U1RRE5 68 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 A0A1W2PPV4 95 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 NUDT3O95989 172 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 ATP5G1P05496 136 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 RPS10P46783 165 aaKnown RBP6.91□□□□□ -1.3
LINC01238-204ENST00000451070 ATP5G3P48201 142 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 CRYBA4P53673 196 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 TAS2R30P59541 319 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 RAB31Q13636 194 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 IAH1Q2TAA2 248 aaPredicted RBP6.91□□□□□ -1.3
LINC01238-204ENST00000451070 MORN5Q5VZ52 161 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 PRR27Q6MZM9 219 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 TEPPQ6URK8 271 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 S100A7AQ86SG5 101 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 OR10P1Q8NGE3 313 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 C16orf74Q96GX8 76 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 SFRP2Q96HF1 295 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 WFDC1Q9HC57 220 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 LINC00588Q9Y4M8 146 aa6.91□□□□□ -1.3
LINC01238-204ENST00000451070 PRAC2D3DTV9 90 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 SLC17A3O00476 420 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 LCE2BO14633 110 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 AGPAT2O15120 278 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 MBPP02686 304 aaPredicted RBP6.9□□□□□ -1.3
LINC01238-204ENST00000451070 TPT1P13693 172 aaKnown RBP6.9□□□□□ -1.3
LINC01238-204ENST00000451070 HTN1P15515 57 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 SULT1A1P50225 295 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 LCN15Q6UWW0 184 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 ZNF493Q6ZR52 646 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 LINC00305Q7Z4B0 112 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 ZNF546Q86UE3 836 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 TMEM263Q8WUH6 116 aaKnown RBP6.9□□□□□ -1.3
LINC01238-204ENST00000451070 TMEM37Q8WXS4 190 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 MGST2Q99735 147 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 NOP10Q9NPE3 64 aaKnown RBP6.9□□□□□ -1.3
LINC01238-204ENST00000451070 OR5AC2Q9NZP5 309 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 TIMM8BQ9Y5J9 83 aaPredicted RBP6.9□□□□□ -1.3
LINC01238-204ENST00000451070 COX11Q9Y6N1 276 aa6.9□□□□□ -1.3
LINC01238-204ENST00000451070 A4D1N5 150 aa6.89□□□□□ -1.31
LINC01238-204ENST00000451070 H3BTX0 84 aa6.89□□□□□ -1.31
LINC01238-204ENST00000451070 H7BYZ3 331 aa6.89□□□□□ -1.31
LINC01238-204ENST00000451070 GOSR2O14653 212 aa6.89□□□□□ -1.31
LINC01238-204ENST00000451070 RPL29P47914 159 aaKnown RBP6.89□□□□□ -1.31
LINC01238-204ENST00000451070 C6orf223Q8N319 242 aa6.89□□□□□ -1.31
LINC01238-204ENST00000451070 LINC00612Q8N6U2 182 aa6.89□□□□□ -1.31
LINC01238-204ENST00000451070 SLC50A1Q9BRV3 221 aa6.89□□□□□ -1.31
LINC01238-204ENST00000451070 TNFSF18Q9UNG2 199 aa6.89□□□□□ -1.31
LINC01238-204ENST00000451070 APOBP04114 4563 aaKnown RBP6.89□□□□□ -1.31
LINC01238-204ENST00000451070 H3BQ15 152 aa6.88□□□□□ -1.31
LINC01238-204ENST00000451070 TSPAN13O95857 204 aa6.88□□□□□ -1.31
LINC01238-204ENST00000451070 IGLC2P0DOY2 106 aa6.88□□□□□ -1.31
LINC01238-204ENST00000451070 CCL18P55774 89 aa6.88□□□□□ -1.31
LINC01238-204ENST00000451070 GFI1BQ5VTD9 330 aa6.88□□□□□ -1.31
LINC01238-204ENST00000451070 BPIFA4PQ86YQ2 179 aa6.88□□□□□ -1.31
LINC01238-204ENST00000451070 TMEM18Q96B42 140 aa6.88□□□□□ -1.31
LINC01238-204ENST00000451070 C11orf1Q9H5F2 150 aa6.88□□□□□ -1.31
LINC01238-204ENST00000451070 C16orf90A8MZG2 172 aa6.87□□□□□ -1.31
LINC01238-204ENST00000451070 COX7A2P2O60397 106 aa6.87□□□□□ -1.31
LINC01238-204ENST00000451070 C10orf113Q5VZT2 155 aa6.87□□□□□ -1.31
LINC01238-204ENST00000451070 MIC13Q5XKP0 118 aa6.87□□□□□ -1.31
LINC01238-204ENST00000451070 LYPD6BQ8NI32 183 aa6.87□□□□□ -1.31
LINC01238-204ENST00000451070 TPPP3Q9BW30 176 aa6.87□□□□□ -1.31
LINC01238-204ENST00000451070 ZNF471Q9BX82 626 aaPredicted RBP6.87□□□□□ -1.31
LINC01238-204ENST00000451070 KRTAP1-5Q9BYS1 174 aa6.87□□□□□ -1.31
LINC01238-204ENST00000451070 PXMP4Q9Y6I8 212 aa6.87□□□□□ -1.31
LINC01238-204ENST00000451070 DNAH5Q8TE73 4624 aa6.87□□□□□ -1.31
LINC01238-204ENST00000451070 TRAV26-1A0A087WT03 109 aa6.86□□□□□ -1.31
LINC01238-204ENST00000451070 TRAV5A0A0B4J249 113 aa6.86□□□□□ -1.31
LINC01238-204ENST00000451070 CDK2AP2O75956 126 aa6.86□□□□□ -1.31
LINC01238-204ENST00000451070 CT45A10P0DMU9 189 aa6.86□□□□□ -1.31
LINC01238-204ENST00000451070 SRSF3P84103 164 aaKnown RBP6.86□□□□□ -1.31
LINC01238-204ENST00000451070 OR10J6PQ8NGY7 276 aa6.86□□□□□ -1.31
LINC01238-204ENST00000451070 VCX2Q9H322 139 aa6.86□□□□□ -1.31
LINC01238-204ENST00000451070 Q9H8V8 135 aa6.86□□□□□ -1.31
LINC01238-204ENST00000451070 TRAV12-3A0A0B4J271 114 aa6.85□□□□□ -1.31
LINC01238-204ENST00000451070 TRBV7-9A0A0J9YWB2 115 aa6.85□□□□□ -1.31
LINC01238-204ENST00000451070 A0A0J9YY99 117 aa6.85□□□□□ -1.31
LINC01238-204ENST00000451070 GAGE12BA1L429 117 aa6.85□□□□□ -1.31
LINC01238-204ENST00000451070 FAM24AA6NFZ4 105 aa6.85□□□□□ -1.31
LINC01238-204ENST00000451070 NPIPB6E9PJ23 425 aa6.85□□□□□ -1.31
LINC01238-204ENST00000451070 GAGE7O76087 117 aa6.85□□□□□ -1.31
LINC01238-204ENST00000451070 CST7O76096 145 aa6.85□□□□□ -1.31
LINC01238-204ENST00000451070 TRGC1P0CF51 173 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms