RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 MRPS16Q9Y3D3 137 aaKnown RBP10.75□□□□□ -0.69
LIMS1-210ENST00000449684 A0A1W2PRE2 83 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 FBLL1A6NHQ2 334 aaKnown RBP10.74□□□□□ -0.69
LIMS1-210ENST00000449684 GGTLC3B5MD39 225 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 GCGP01275 180 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 SFTA3P0C7M3 94 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 PPT1P50897 306 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 CRYBA4P53673 196 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 UBE2G2P60604 165 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 FHL2Q14192 279 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 MRPL23Q16540 153 aaKnown RBP10.74□□□□□ -0.69
LIMS1-210ENST00000449684 SMUG1Q53HV7 270 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 SAPCD1Q5SSQ6 148 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 OR4C5Q8NGB2 326 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 RASL10AQ92737 203 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 UPK3BQ9BT76 320 aa10.74□□□□□ -0.69
LIMS1-210ENST00000449684 IGHV3-16A0A0C4DH30 117 aa10.73□□□□□ -0.69
LIMS1-210ENST00000449684 A0A1B0GVY2 172 aa10.73□□□□□ -0.69
LIMS1-210ENST00000449684 SMLR1H3BR10 107 aa10.73□□□□□ -0.69
LIMS1-210ENST00000449684 M0R2P5 195 aa10.73□□□□□ -0.69
LIMS1-210ENST00000449684 TYMSP04818 313 aa10.73□□□□□ -0.69
LIMS1-210ENST00000449684 FGF8P55075 233 aaPredicted RBP10.73□□□□□ -0.69
LIMS1-210ENST00000449684 TMEM75Q8N9X5 138 aa10.73□□□□□ -0.69
LIMS1-210ENST00000449684 ZNF479Q96JC4 524 aa10.73□□□□□ -0.69
LIMS1-210ENST00000449684 FAT2Q9NYQ8 4349 aa10.72□□□□□ -0.69
LIMS1-210ENST00000449684 ZNF726P1Q15940 193 aa10.72□□□□□ -0.69
LIMS1-210ENST00000449684 STOML3Q8TAV4 291 aa10.72□□□□□ -0.69
LIMS1-210ENST00000449684 NKX6-2Q9C056 277 aaPredicted RBP10.72□□□□□ -0.69
LIMS1-210ENST00000449684 TRAV4A0A0B4J268 109 aa10.71□□□□□ -0.69
LIMS1-210ENST00000449684 MAP1LC3B2A6NCE7 125 aa10.71□□□□□ -0.69
LIMS1-210ENST00000449684 C9JCJ5 164 aa10.71□□□□□ -0.69
LIMS1-210ENST00000449684 G3V3Q6 166 aa10.71□□□□□ -0.69
LIMS1-210ENST00000449684 PFN1P07737 140 aaKnown RBP10.71□□□□□ -0.69
LIMS1-210ENST00000449684 SRIP30626 198 aa10.71□□□□□ -0.69
LIMS1-210ENST00000449684 NEGR1Q7Z3B1 354 aa10.71□□□□□ -0.69
LIMS1-210ENST00000449684 MAP1LC3BQ9GZQ8 125 aa10.71□□□□□ -0.69
LIMS1-210ENST00000449684 TRAV34A0A0B4J273 112 aa10.7□□□□□ -0.7
LIMS1-210ENST00000449684 A0A1W2PPQ1 181 aa10.7□□□□□ -0.7
LIMS1-210ENST00000449684 SIVA1O15304 175 aa10.7□□□□□ -0.7
LIMS1-210ENST00000449684 ORM1P02763 201 aa10.7□□□□□ -0.7
LIMS1-210ENST00000449684 ZNF80P51504 273 aaPredicted RBP10.7□□□□□ -0.7
LIMS1-210ENST00000449684 CYTL1Q9NRR1 136 aa10.7□□□□□ -0.7
LIMS1-210ENST00000449684 KANTRA0A1W2PQU2 76 aa10.69□□□□□ -0.7
LIMS1-210ENST00000449684 PEX7O00628 323 aa10.69□□□□□ -0.7
LIMS1-210ENST00000449684 NXPH4O95158 308 aa10.69□□□□□ -0.7
LIMS1-210ENST00000449684 IGLV2-11P01706 119 aa10.69□□□□□ -0.7
LIMS1-210ENST00000449684 GYPEP15421 78 aa10.69□□□□□ -0.7
LIMS1-210ENST00000449684 TNP2Q05952 138 aa10.69□□□□□ -0.7
LIMS1-210ENST00000449684 ZNF876PQ49A33 203 aa10.69□□□□□ -0.7
LIMS1-210ENST00000449684 KCNRGQ8N5I3 272 aa10.69□□□□□ -0.7
LIMS1-210ENST00000449684 HIST1H2BAQ96A08 127 aa10.69□□□□□ -0.7
LIMS1-210ENST00000449684 LINC00479Q96M42 142 aa10.69□□□□□ -0.7
LIMS1-210ENST00000449684 TXNDC17Q9BRA2 123 aa10.69□□□□□ -0.7
LIMS1-210ENST00000449684 A0A0D9SG52 128 aa10.68□□□□□ -0.7
LIMS1-210ENST00000449684 FAM74A7A6NL05 159 aa10.68□□□□□ -0.7
LIMS1-210ENST00000449684 S100A4P26447 101 aaKnown RBP10.68□□□□□ -0.7
LIMS1-210ENST00000449684 UBE2G1P62253 170 aa10.68□□□□□ -0.7
LIMS1-210ENST00000449684 ZNF345Q14585 488 aa10.68□□□□□ -0.7
LIMS1-210ENST00000449684 CST9LP1Q5W188 147 aa10.68□□□□□ -0.7
LIMS1-210ENST00000449684 LYPD5Q6UWN5 251 aa10.68□□□□□ -0.7
LIMS1-210ENST00000449684 ZNF471Q9BX82 626 aaPredicted RBP10.68□□□□□ -0.7
LIMS1-210ENST00000449684 ARL2-SNX15V9GYD0 113 aa10.68□□□□□ -0.7
LIMS1-210ENST00000449684 HMSDA8MTL9 139 aa10.67□□□□□ -0.7
LIMS1-210ENST00000449684 FABP5P3A8MUU1 101 aa10.67□□□□□ -0.7
LIMS1-210ENST00000449684 K7EQD1 137 aa10.67□□□□□ -0.7
LIMS1-210ENST00000449684 EIF5AP63241 154 aaKnown RBP10.67□□□□□ -0.7
LIMS1-210ENST00000449684 C11orf21Q9P2W6 132 aa10.67□□□□□ -0.7
LIMS1-210ENST00000449684 TRAV9-2A0A087WT02 112 aa10.66□□□□□ -0.7
LIMS1-210ENST00000449684 PFDN1O60925 122 aa10.66□□□□□ -0.7
LIMS1-210ENST00000449684 SEC11BP0C7V7 166 aa10.66□□□□□ -0.7
LIMS1-210ENST00000449684 NHLRC2Q8NBF2 726 aa10.66□□□□□ -0.7
LIMS1-210ENST00000449684 FAM213BQ8TBF2 198 aa10.66□□□□□ -0.7
LIMS1-210ENST00000449684 KRTAP1-5Q9BYS1 174 aa10.66□□□□□ -0.7
LIMS1-210ENST00000449684 UMAD1C9J7I0 102 aa10.65□□□□□ -0.7
LIMS1-210ENST00000449684 CIDEAO60543 219 aa10.65□□□□□ -0.7
LIMS1-210ENST00000449684 MED14OSP0DP75 135 aa10.65□□□□□ -0.7
LIMS1-210ENST00000449684 BTF3P20290 206 aaKnown RBP10.65□□□□□ -0.7
LIMS1-210ENST00000449684 FHITP49789 147 aa10.65□□□□□ -0.7
LIMS1-210ENST00000449684 SH2D6Q7Z4S9 175 aa10.65□□□□□ -0.7
LIMS1-210ENST00000449684 Q86TA4 180 aa10.65□□□□□ -0.7
LIMS1-210ENST00000449684 SFT2D1Q8WV19 159 aa10.65□□□□□ -0.7
LIMS1-210ENST00000449684 FMC1Q96HJ9 113 aa10.65□□□□□ -0.7
LIMS1-210ENST00000449684 PRADC1Q9BSG0 188 aa10.65□□□□□ -0.7
LIMS1-210ENST00000449684 PKD1P98161 4303 aa10.65□□□□□ -0.7
LIMS1-210ENST00000449684 PKHD1P08F94 4074 aa10.65□□□□□ -0.7
LIMS1-210ENST00000449684 IGHV3-73A0A0B4J1V6 119 aa10.64□□□□□ -0.71
LIMS1-210ENST00000449684 A0A1B0GV50 99 aa10.64□□□□□ -0.71
LIMS1-210ENST00000449684 BCL2L11O43521 198 aa10.64□□□□□ -0.71
LIMS1-210ENST00000449684 ASIPP42127 132 aa10.64□□□□□ -0.71
LIMS1-210ENST00000449684 OR11H4Q8NGC9 324 aa10.64□□□□□ -0.71
LIMS1-210ENST00000449684 TCEAL7Q9BRU2 100 aa10.64□□□□□ -0.71
LIMS1-210ENST00000449684 ZFP30Q9Y2G7 519 aa10.64□□□□□ -0.71
LIMS1-210ENST00000449684 C16orf90A8MZG2 172 aa10.63□□□□□ -0.71
LIMS1-210ENST00000449684 B4DEV8 164 aa10.63□□□□□ -0.71
LIMS1-210ENST00000449684 RS1O15537 224 aa10.63□□□□□ -0.71
LIMS1-210ENST00000449684 GATA1P15976 413 aaPredicted RBP10.63□□□□□ -0.71
LIMS1-210ENST00000449684 AKR1C3P42330 323 aa10.63□□□□□ -0.71
LIMS1-210ENST00000449684 LGALSLQ3ZCW2 172 aaPredicted RBP10.63□□□□□ -0.71
LIMS1-210ENST00000449684 CFAP126Q5VTH2 177 aa10.63□□□□□ -0.71
LIMS1-210ENST00000449684 ZNF575Q86XF7 245 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms