RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 IGKV3D-20A0A0C4DH25 116 aa10.59□□□□□ -0.71
SHANK2-210ENST00000449116 SMIM9A6NGZ8 99 aa10.59□□□□□ -0.71
SHANK2-210ENST00000449116 CBY3A6NI87 242 aa10.59□□□□□ -0.71
SHANK2-210ENST00000449116 P01737 135 aa10.59□□□□□ -0.71
SHANK2-210ENST00000449116 HTN1P15515 57 aa10.59□□□□□ -0.71
SHANK2-210ENST00000449116 ERVFC1-1P60608 527 aa10.59□□□□□ -0.71
SHANK2-210ENST00000449116 IBA57Q5T440 356 aaKnown RBP10.59□□□□□ -0.71
SHANK2-210ENST00000449116 NUDT10Q8NFP7 164 aa10.59□□□□□ -0.71
SHANK2-210ENST00000449116 NUDT11Q96G61 164 aa10.59□□□□□ -0.71
SHANK2-210ENST00000449116 RNASE7Q9H1E1 156 aaKnown RBP10.59□□□□□ -0.71
SHANK2-210ENST00000449116 X6R8D5 127 aa10.59□□□□□ -0.71
SHANK2-210ENST00000449116 MEGF8Q7Z7M0 2845 aa10.59□□□□□ -0.71
SHANK2-210ENST00000449116 PRKDCP78527 4128 aaKnown RBP10.58□□□□□ -0.72
SHANK2-210ENST00000449116 ZNF705GA8MUZ8 300 aaPredicted RBP10.58□□□□□ -0.72
SHANK2-210ENST00000449116 B4DEV8 164 aa10.58□□□□□ -0.72
SHANK2-210ENST00000449116 M0R036 132 aa10.58□□□□□ -0.72
SHANK2-210ENST00000449116 RRN3P1Q2M238 152 aa10.58□□□□□ -0.72
SHANK2-210ENST00000449116 SFRP2Q96HF1 295 aa10.58□□□□□ -0.72
SHANK2-210ENST00000449116 ZMAT4Q9H898 229 aa10.58□□□□□ -0.72
SHANK2-210ENST00000449116 OSTCQ9NRP0 149 aa10.58□□□□□ -0.72
SHANK2-210ENST00000449116 HUWE1Q7Z6Z7 4374 aaKnown RBP10.57□□□□□ -0.72
SHANK2-210ENST00000449116 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
SHANK2-210ENST00000449116 TMEM189A5PLL7 270 aa10.57□□□□□ -0.72
SHANK2-210ENST00000449116 PRM2P04554 102 aa10.57□□□□□ -0.72
SHANK2-210ENST00000449116 TYMSP04818 313 aa10.57□□□□□ -0.72
SHANK2-210ENST00000449116 MIFP14174 115 aa10.57□□□□□ -0.72
SHANK2-210ENST00000449116 RPL19P84098 196 aaKnown RBP10.57□□□□□ -0.72
SHANK2-210ENST00000449116 TP53TG3Q9ULZ0 132 aa10.57□□□□□ -0.72
SHANK2-210ENST00000449116 TMSB15BA0A087X1C1 80 aa10.56□□□□□ -0.72
SHANK2-210ENST00000449116 GNRH2O43555 120 aa10.56□□□□□ -0.72
SHANK2-210ENST00000449116 GATCO43716 136 aaKnown RBP10.56□□□□□ -0.72
SHANK2-210ENST00000449116 NHLRC4P0CG21 123 aaPredicted RBP10.56□□□□□ -0.72
SHANK2-210ENST00000449116 AZU1P20160 251 aa10.56□□□□□ -0.72
SHANK2-210ENST00000449116 C15orf54Q8N8G6 183 aa10.56□□□□□ -0.72
SHANK2-210ENST00000449116 OR2D3Q8NGH3 330 aa10.56□□□□□ -0.72
SHANK2-210ENST00000449116 OR10G8Q8NGN5 311 aa10.56□□□□□ -0.72
SHANK2-210ENST00000449116 RNASE8Q8TDE3 154 aaKnown RBP10.56□□□□□ -0.72
SHANK2-210ENST00000449116 TMEM263Q8WUH6 116 aaKnown RBP10.56□□□□□ -0.72
SHANK2-210ENST00000449116 C16orf74Q96GX8 76 aa10.56□□□□□ -0.72
SHANK2-210ENST00000449116 RPP21Q9H633 154 aaKnown RBP10.56□□□□□ -0.72
SHANK2-210ENST00000449116 APOC3P02656 99 aa10.55□□□□□ -0.72
SHANK2-210ENST00000449116 CXCL1P09341 107 aa10.55□□□□□ -0.72
SHANK2-210ENST00000449116 RPS20P60866 119 aaKnown RBP10.55□□□□□ -0.72
SHANK2-210ENST00000449116 ZNF493Q6ZR52 646 aa10.55□□□□□ -0.72
SHANK2-210ENST00000449116 IGHV3-16A0A0C4DH30 117 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 IGHV4-28A0A0C4DH34 117 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 XKRY2A2RUG3 117 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 GRIFINA4D1Z8 144 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 ASIPP42127 132 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 ZNF415Q09FC8 603 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 CT83Q5H943 113 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 ZNF575Q86XF7 245 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 SVBPQ8N300 66 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 Q8NAQ8 132 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 MDFICQ9P1T7 246 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 V9GYV3 84 aa10.54□□□□□ -0.72
SHANK2-210ENST00000449116 PPP1R2P9O14990 202 aa10.53□□□□□ -0.72
SHANK2-210ENST00000449116 MT-ND4LP03901 98 aa10.53□□□□□ -0.72
SHANK2-210ENST00000449116 S100A4P26447 101 aaKnown RBP10.53□□□□□ -0.72
SHANK2-210ENST00000449116 RNF212Q495C1 297 aa10.53□□□□□ -0.72
SHANK2-210ENST00000449116 DNLZQ5SXM8 178 aa10.53□□□□□ -0.72
SHANK2-210ENST00000449116 C11orf72Q8NBR9 251 aa10.53□□□□□ -0.72
SHANK2-210ENST00000449116 CLRN3Q8NCR9 226 aa10.53□□□□□ -0.72
SHANK2-210ENST00000449116 ANAPC16Q96DE5 110 aa10.53□□□□□ -0.72
SHANK2-210ENST00000449116 NBEAL2Q6ZNJ1 2754 aa10.52□□□□□ -0.73
SHANK2-210ENST00000449116 PLAC8L1A1L4L8 177 aa10.52□□□□□ -0.73
SHANK2-210ENST00000449116 A8MWL6 223 aa10.52□□□□□ -0.73
SHANK2-210ENST00000449116 SNURFLB1AK76 121 aa10.52□□□□□ -0.73
SHANK2-210ENST00000449116 GZMBP10144 247 aa10.52□□□□□ -0.73
SHANK2-210ENST00000449116 TCL1AP56279 114 aa10.52□□□□□ -0.73
SHANK2-210ENST00000449116 GSN-AS1Q9NRJ2 163 aa10.52□□□□□ -0.73
SHANK2-210ENST00000449116 H3BVH4 76 aa10.51□□□□□ -0.73
SHANK2-210ENST00000449116 SNAPINO95295 136 aa10.51□□□□□ -0.73
SHANK2-210ENST00000449116 RNASE3P12724 160 aaKnown RBP10.51□□□□□ -0.73
SHANK2-210ENST00000449116 EMP1P54849 157 aa10.51□□□□□ -0.73
SHANK2-210ENST00000449116 RHEBQ15382 184 aa10.51□□□□□ -0.73
SHANK2-210ENST00000449116 IL17DQ8TAD2 202 aa10.51□□□□□ -0.73
SHANK2-210ENST00000449116 TSKUQ8WUA8 353 aa10.51□□□□□ -0.73
SHANK2-210ENST00000449116 C9orf85Q96MD7 179 aa10.51□□□□□ -0.73
SHANK2-210ENST00000449116 C11orf68Q9H3H3 251 aaKnown RBP10.51□□□□□ -0.73
SHANK2-210ENST00000449116 IL36BQ9NZH7 164 aa10.51□□□□□ -0.73
SHANK2-210ENST00000449116 DEFB4AO15263 64 aa10.5□□□□□ -0.73
SHANK2-210ENST00000449116 ARMS2P0C7Q2 107 aa10.5□□□□□ -0.73
SHANK2-210ENST00000449116 MED14OSP0DP75 135 aa10.5□□□□□ -0.73
SHANK2-210ENST00000449116 DAZ2Q13117 558 aaKnown RBP10.5□□□□□ -0.73
SHANK2-210ENST00000449116 SPXQ9BT56 116 aa10.5□□□□□ -0.73
SHANK2-210ENST00000449116 CTDSP1Q9GZU7 261 aa10.5□□□□□ -0.73
SHANK2-210ENST00000449116 GFRA4Q9GZZ7 299 aa10.5□□□□□ -0.73
SHANK2-210ENST00000449116 TIMM8BQ9Y5J9 83 aaPredicted RBP10.5□□□□□ -0.73
SHANK2-210ENST00000449116 A0A1W2PPQ1 181 aa10.49□□□□□ -0.73
SHANK2-210ENST00000449116 C7orf77A4D0Y5 90 aa10.49□□□□□ -0.73
SHANK2-210ENST00000449116 OR5AL1P0C617 328 aa10.49□□□□□ -0.73
SHANK2-210ENST00000449116 IGLC6P0CF74 106 aa10.49□□□□□ -0.73
SHANK2-210ENST00000449116 FER1L6-AS1Q8NA97 138 aa10.49□□□□□ -0.73
SHANK2-210ENST00000449116 TPPP3Q9BW30 176 aa10.49□□□□□ -0.73
SHANK2-210ENST00000449116 SSBP4Q9BWG4 385 aaPredicted RBP10.49□□□□□ -0.73
SHANK2-210ENST00000449116 NOP10Q9NPE3 64 aaKnown RBP10.49□□□□□ -0.73
SHANK2-210ENST00000449116 SCRT2Q9NQ03 307 aa10.49□□□□□ -0.73
SHANK2-210ENST00000449116 A0A0J9YWU9 116 aa10.48□□□□□ -0.73
SHANK2-210ENST00000449116 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms