RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 CXorf1O96002 111 aa12.17□□□□□ -0.46
DDX56-207ENST00000448192 TCRAP04437 139 aa12.17□□□□□ -0.46
DDX56-207ENST00000448192 SUMO1P63165 101 aaKnown RBP12.17□□□□□ -0.46
DDX56-207ENST00000448192 MRPL23Q16540 153 aaKnown RBP12.17□□□□□ -0.46
DDX56-207ENST00000448192 OR2T35Q8NGX2 323 aa12.17□□□□□ -0.46
DDX56-207ENST00000448192 SUN5Q8TC36 379 aa12.17□□□□□ -0.46
DDX56-207ENST00000448192 TMEM167BQ9NRX6 74 aa12.17□□□□□ -0.46
DDX56-207ENST00000448192 SIVA1O15304 175 aa12.16□□□□□ -0.46
DDX56-207ENST00000448192 TYMSP04818 313 aa12.16□□□□□ -0.46
DDX56-207ENST00000448192 KCNS1Q96KK3 526 aa12.16□□□□□ -0.46
DDX56-207ENST00000448192 KRTAP17-1Q9BYP8 105 aa12.16□□□□□ -0.46
DDX56-207ENST00000448192 SDF2L1Q9HCN8 221 aa12.16□□□□□ -0.46
DDX56-207ENST00000448192 M0R2P5 195 aa12.15□□□□□ -0.46
DDX56-207ENST00000448192 NXPH4O95158 308 aa12.15□□□□□ -0.46
DDX56-207ENST00000448192 RGS21Q2M5E4 152 aa12.15□□□□□ -0.46
DDX56-207ENST00000448192 LYPD5Q6UWN5 251 aa12.15□□□□□ -0.46
DDX56-207ENST00000448192 NEGR1Q7Z3B1 354 aa12.15□□□□□ -0.46
DDX56-207ENST00000448192 OR4C5Q8NGB2 326 aa12.15□□□□□ -0.46
DDX56-207ENST00000448192 EPDR1Q9UM22 224 aa12.15□□□□□ -0.46
DDX56-207ENST00000448192 PSG8Q9UQ74 426 aa12.15□□□□□ -0.46
DDX56-207ENST00000448192 PCLOQ9Y6V0 5065 aa12.14□□□□□ -0.47
DDX56-207ENST00000448192 TRAV4A0A0B4J268 109 aa12.14□□□□□ -0.47
DDX56-207ENST00000448192 C16orf90A8MZG2 172 aa12.14□□□□□ -0.47
DDX56-207ENST00000448192 GGTLC3B5MD39 225 aa12.14□□□□□ -0.47
DDX56-207ENST00000448192 PRNTQ86SH4 94 aa12.14□□□□□ -0.47
DDX56-207ENST00000448192 PCNPQ8WW12 178 aaKnown RBP12.14□□□□□ -0.47
DDX56-207ENST00000448192 RYR1P21817 5038 aa12.13□□□□□ -0.47
DDX56-207ENST00000448192 K7EQD1 137 aa12.13□□□□□ -0.47
DDX56-207ENST00000448192 GCGP01275 180 aa12.13□□□□□ -0.47
DDX56-207ENST00000448192 GYPEP15421 78 aa12.13□□□□□ -0.47
DDX56-207ENST00000448192 SRIP30626 198 aa12.13□□□□□ -0.47
DDX56-207ENST00000448192 ZNF80P51504 273 aaPredicted RBP12.13□□□□□ -0.47
DDX56-207ENST00000448192 FLI1Q01543 452 aaPredicted RBP12.13□□□□□ -0.47
DDX56-207ENST00000448192 CYB561D1Q8N8Q1 229 aa12.13□□□□□ -0.47
DDX56-207ENST00000448192 LRP1BQ9NZR2 4599 aa12.12□□□□□ -0.47
DDX56-207ENST00000448192 IGLV2-11P01706 119 aa12.12□□□□□ -0.47
DDX56-207ENST00000448192 LINC00315P59091 139 aa12.12□□□□□ -0.47
DDX56-207ENST00000448192 ZNF726P1Q15940 193 aa12.12□□□□□ -0.47
DDX56-207ENST00000448192 ZFP69Q49AA0 526 aa12.12□□□□□ -0.47
DDX56-207ENST00000448192 C11orf21Q9P2W6 132 aa12.12□□□□□ -0.47
DDX56-207ENST00000448192 CTXND1A0A1B0GTU2 59 aa12.11□□□□□ -0.47
DDX56-207ENST00000448192 A0A1W2PRE2 83 aa12.11□□□□□ -0.47
DDX56-207ENST00000448192 C9JCJ5 164 aa12.11□□□□□ -0.47
DDX56-207ENST00000448192 TAAR5O14804 337 aa12.11□□□□□ -0.47
DDX56-207ENST00000448192 IFNA7P01567 189 aa12.11□□□□□ -0.47
DDX56-207ENST00000448192 ORM1P02763 201 aa12.11□□□□□ -0.47
DDX56-207ENST00000448192 UBE2G2P60604 165 aa12.11□□□□□ -0.47
DDX56-207ENST00000448192 SMUG1Q53HV7 270 aa12.11□□□□□ -0.47
DDX56-207ENST00000448192 TMEM75Q8N9X5 138 aa12.11□□□□□ -0.47
DDX56-207ENST00000448192 G3V3Q6 166 aa12.1□□□□□ -0.47
DDX56-207ENST00000448192 ARPC5O15511 151 aa12.1□□□□□ -0.47
DDX56-207ENST00000448192 PFN1P07737 140 aaKnown RBP12.1□□□□□ -0.47
DDX56-207ENST00000448192 BTF3P20290 206 aaKnown RBP12.1□□□□□ -0.47
DDX56-207ENST00000448192 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
DDX56-207ENST00000448192 AKR1C8PQ5T2L2 129 aa12.1□□□□□ -0.47
DDX56-207ENST00000448192 SPATA12Q7Z6I5 190 aa12.1□□□□□ -0.47
DDX56-207ENST00000448192 LINC00479Q96M42 142 aa12.1□□□□□ -0.47
DDX56-207ENST00000448192 TRAV34A0A0B4J273 112 aa12.09□□□□□ -0.47
DDX56-207ENST00000448192 FBLL1A6NHQ2 334 aaKnown RBP12.09□□□□□ -0.47
DDX56-207ENST00000448192 FGF8P55075 233 aaPredicted RBP12.09□□□□□ -0.47
DDX56-207ENST00000448192 SAPCD1Q5SSQ6 148 aa12.09□□□□□ -0.47
DDX56-207ENST00000448192 TXNDC17Q9BRA2 123 aa12.09□□□□□ -0.47
DDX56-207ENST00000448192 HSPG2P98160 4391 aa12.09□□□□□ -0.47
DDX56-207ENST00000448192 LOC100131303A0A0U1RQF7 123 aa12.08□□□□□ -0.48
DDX56-207ENST00000448192 DNAH5Q8TE73 4624 aa12.07□□□□□ -0.48
DDX56-207ENST00000448192 SMLR1H3BR10 107 aa12.07□□□□□ -0.48
DDX56-207ENST00000448192 PPT1P50897 306 aa12.07□□□□□ -0.48
DDX56-207ENST00000448192 WFDC10BQ8IUB3 73 aa12.07□□□□□ -0.48
DDX56-207ENST00000448192 NHLRC2Q8NBF2 726 aa12.07□□□□□ -0.48
DDX56-207ENST00000448192 CYTL1Q9NRR1 136 aa12.07□□□□□ -0.48
DDX56-207ENST00000448192 LY96Q9Y6Y9 160 aa12.07□□□□□ -0.48
DDX56-207ENST00000448192 ARL2-SNX15V9GYD0 113 aa12.07□□□□□ -0.48
DDX56-207ENST00000448192 TRAV9-2A0A087WT02 112 aa12.06□□□□□ -0.48
DDX56-207ENST00000448192 FAM74A7A6NL05 159 aa12.06□□□□□ -0.48
DDX56-207ENST00000448192 PEX7O00628 323 aa12.06□□□□□ -0.48
DDX56-207ENST00000448192 GATA1P15976 413 aaPredicted RBP12.06□□□□□ -0.48
DDX56-207ENST00000448192 TNFRSF18Q9Y5U5 241 aa12.06□□□□□ -0.48
DDX56-207ENST00000448192 IGHV3-73A0A0B4J1V6 119 aa12.05□□□□□ -0.48
DDX56-207ENST00000448192 MAP1LC3B2A6NCE7 125 aa12.05□□□□□ -0.48
DDX56-207ENST00000448192 RS1O15537 224 aa12.05□□□□□ -0.48
DDX56-207ENST00000448192 CFAP126Q5VTH2 177 aa12.05□□□□□ -0.48
DDX56-207ENST00000448192 DPPA3Q6W0C5 159 aa12.05□□□□□ -0.48
DDX56-207ENST00000448192 Q6ZRN7 208 aaPredicted RBP12.05□□□□□ -0.48
DDX56-207ENST00000448192 C9orf85Q96MD7 179 aa12.05□□□□□ -0.48
DDX56-207ENST00000448192 NKX6-2Q9C056 277 aaPredicted RBP12.05□□□□□ -0.48
DDX56-207ENST00000448192 MAP1LC3BQ9GZQ8 125 aa12.05□□□□□ -0.48
DDX56-207ENST00000448192 PGPEP1LA6NFU8 196 aa12.04□□□□□ -0.48
DDX56-207ENST00000448192 EVI2AP22794 236 aa12.04□□□□□ -0.48
DDX56-207ENST00000448192 KRTAP10-2P60368 255 aa12.04□□□□□ -0.48
DDX56-207ENST00000448192 ZNF506Q5JVG8 444 aa12.04□□□□□ -0.48
DDX56-207ENST00000448192 SH2D6Q7Z4S9 175 aa12.04□□□□□ -0.48
DDX56-207ENST00000448192 SLC25A29Q8N8R3 303 aa12.04□□□□□ -0.48
DDX56-207ENST00000448192 HIST1H2BAQ96A08 127 aa12.04□□□□□ -0.48
DDX56-207ENST00000448192 APOBP04114 4563 aaKnown RBP12.04□□□□□ -0.48
DDX56-207ENST00000448192 FABP5P3A8MUU1 101 aa12.03□□□□□ -0.48
DDX56-207ENST00000448192 RNASE3P12724 160 aaKnown RBP12.03□□□□□ -0.48
DDX56-207ENST00000448192 S100A4P26447 101 aaKnown RBP12.03□□□□□ -0.48
DDX56-207ENST00000448192 Q86TA4 180 aa12.03□□□□□ -0.48
DDX56-207ENST00000448192 IGKV3D-20A0A0C4DH25 116 aa12.02□□□□□ -0.49
DDX56-207ENST00000448192 CIDEAO60543 219 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms