RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 C2orf50Q96LR7 162 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 PRADC1Q9BSG0 188 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 SPXQ9BT56 116 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 NAA60Q9H7X0 242 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 TP53TG3Q9ULZ0 132 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 KLF12Q9Y4X4 402 aa3.78□□□□□ -1.8
USP49-205ENST00000448078 IGHV1OR15-1A0A075B7D0 117 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 A0A0B4J2A0 478 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 A0A0G2JRQ6 117 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 H3BRN7 92 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 GOSR2O14653 212 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 LECT2O14960 151 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 PITX3O75364 302 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 RAB3DO95716 219 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 APOA1P02647 267 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 CT45A10P0DMU9 189 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 HIST1H1EP10412 219 aaKnown RBP3.77□□□□□ -1.81
USP49-205ENST00000448078 TAS2R19P59542 299 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 ZNF846Q147U1 533 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 ELOBQ15370 118 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 SURF2Q15527 256 aaPredicted RBP3.77□□□□□ -1.81
USP49-205ENST00000448078 TMEM78Q5T7P6 136 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 CYP2G1PQ6ZSU1 146 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 NRARPQ7Z6K4 114 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 OR13C8Q8NGS7 320 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 MARCH1Q8TCQ1 289 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 BAALCQ8WXS3 180 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 YIPF6Q96EC8 236 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 ATP5SQ99766 215 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 ARL6Q9H0F7 186 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 ZNF331Q9NQX6 463 aaPredicted RBP3.77□□□□□ -1.81
USP49-205ENST00000448078 MRPL16Q9NX20 251 aaKnown RBP3.77□□□□□ -1.81
USP49-205ENST00000448078 SHPKQ9UHJ6 478 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 PRELID1Q9Y255 219 aa3.77□□□□□ -1.81
USP49-205ENST00000448078 STRAPQ9Y3F4 350 aaKnown RBP3.77□□□□□ -1.81
USP49-205ENST00000448078 A0A087WWC5 75 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 A0A087WZ39 114 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 RNF222A6NCQ9 220 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 FAM25AB3EWG3 89 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 FAM25CB3EWG5 89 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 FAM25GB3EWG6 89 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 LINC00869P0C866 280 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 LELP1Q5T871 98 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 Q6ZRG5 221 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 ACOT7LQ6ZUV0 252 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 LHFPL1Q86WI0 220 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 C11orf72Q8NBR9 251 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 OR10G4Q8NGN3 311 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 FAM218AQ96MZ4 157 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 SRRQ9GZT4 340 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 OR51M1Q9H341 326 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 JPT2Q9H910 190 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 NPVFQ9HCQ7 196 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 COMMD3Q9UBI1 195 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 TIMM9Q9Y5J7 89 aa3.76□□□□□ -1.81
USP49-205ENST00000448078 TRAV4A0A0B4J268 109 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 TAAR5O14804 337 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 COX7A2P2O60397 106 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 CD3DP04234 171 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 OR10J4P0C629 311 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 PLP1P60201 277 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 KRTAP10-4P60372 401 aaPredicted RBP3.75□□□□□ -1.81
USP49-205ENST00000448078 GABARAPL2P60520 117 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 LINC01620Q4KN68 170 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 SPANXN5Q5MJ07 72 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 FAM159AQ6UWV7 190 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 LINC00305Q7Z4B0 112 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 TMEM229BQ8NBD8 167 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 OR10P1Q8NGE3 313 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 OR10G9Q8NGN4 311 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 LHFPL5Q8TAF8 219 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 ZC2HC1AQ96GY0 325 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 CNBD2Q96M20 576 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 PRRT1Q99946 306 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 PARD6GQ9BYG4 376 aaPredicted RBP3.75□□□□□ -1.81
USP49-205ENST00000448078 GTSF1LQ9H1H1 148 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 ARV1Q9H2C2 271 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 SCP2D1Q9UJQ7 156 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 RPH3ALQ9UNE2 315 aa3.75□□□□□ -1.81
USP49-205ENST00000448078 IGLV4-3A0A075B6K6 122 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 IGKV2D-24A0A075B6R9 120 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 IGKV1OR2-108A0A075B7D4 117 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 DUXBA0A1W2PPF3 345 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 PGPA6NDG6 321 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 ANKRD65E5RJM6 399 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 SYNGR2O43760 224 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 OR4E1P0C645 316 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 SFTA3P0C7M3 94 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 MT1HL1P0DM35 61 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 IAPPP10997 89 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 SSBP1Q04837 148 aaKnown RBP3.74□□□□□ -1.81
USP49-205ENST00000448078 Q0VG73 95 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 C10orf113Q5VZT2 155 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 REG3GQ6UW15 175 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 ZNF546Q86UE3 836 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 C7orf33Q8WU49 177 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 MRPL53Q96EL3 112 aaKnown RBP3.74□□□□□ -1.81
USP49-205ENST00000448078 RTBDNQ9BSG5 229 aaPredicted RBP3.74□□□□□ -1.81
USP49-205ENST00000448078 Q9H521 79 aa3.74□□□□□ -1.81
USP49-205ENST00000448078 VCX3AQ9NNX9 186 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms