RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 C15orf53Q8NAA6 179 aa14.88□□□□□ -0.03
HMGA1-205ENST00000447654 LINC01587Q99440 93 aa14.88□□□□□ -0.03
HMGA1-205ENST00000447654 P0DMU3 169 aa14.87□□□□□ -0.03
HMGA1-205ENST00000447654 FAM231AP0DMU4 169 aa14.87□□□□□ -0.03
HMGA1-205ENST00000447654 FAM231CP0DMU5 169 aa14.87□□□□□ -0.03
HMGA1-205ENST00000447654 Q8N1Y9 231 aa14.87□□□□□ -0.03
HMGA1-205ENST00000447654 PRR25Q96S07 402 aa14.87□□□□□ -0.03
HMGA1-205ENST00000447654 PRADC1Q9BSG0 188 aa14.87□□□□□ -0.03
HMGA1-205ENST00000447654 LRBAP50851 2863 aa14.86□□□□□ -0.03
HMGA1-205ENST00000447654 ATRXP46100 2492 aa14.86□□□□□ -0.03
HMGA1-205ENST00000447654 MRPS12O15235 138 aaKnown RBP14.86□□□□□ -0.03
HMGA1-205ENST00000447654 SCGB2A1O75556 95 aa14.86□□□□□ -0.03
HMGA1-205ENST00000447654 PRO1854Q9UHT4 67 aa14.86□□□□□ -0.03
HMGA1-205ENST00000447654 NBASA2RRP1 2371 aa14.86□□□□□ -0.03
HMGA1-205ENST00000447654 FAM240AA0A1B0GVK7 77 aa14.85□□□□□ -0.03
HMGA1-205ENST00000447654 ONECUT1Q9UBC0 465 aa14.85□□□□□ -0.03
HMGA1-205ENST00000447654 DCHS2Q6V1P9 2916 aa14.85□□□□□ -0.03
HMGA1-205ENST00000447654 C9JAW5 83 aa14.85□□□□□ -0.03
HMGA1-205ENST00000447654 DUSP14O95147 198 aaKnown RBP14.85□□□□□ -0.03
HMGA1-205ENST00000447654 IL17RELQ6ZVW7 336 aa14.85□□□□□ -0.03
HMGA1-205ENST00000447654 DTX2Q86UW9 622 aa14.85□□□□□ -0.03
HMGA1-205ENST00000447654 NEXN-AS1Q8NBZ9 246 aa14.85□□□□□ -0.03
HMGA1-205ENST00000447654 CITED2Q99967 270 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-205ENST00000447654 POLEQ07864 2286 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 C17orf77Q96MU5 243 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 TRBV7-7A0A0K0K1E9 115 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 IGHV1-46P01743 117 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 CFC1BP0CG36 223 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 CFC1P0CG37 223 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 HES1Q14469 280 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 C3orf36Q3SXR2 165 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 HCP5Q6MZN7 132 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 Q6ZQT7 251 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 LRRC75A-AS1Q8N1F1 130 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 C8orf31Q8N9H6 132 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 PSMG3-AS1Q96PY0 264 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 ASCL2Q99929 193 aa14.84□□□□□ -0.03
HMGA1-205ENST00000447654 TRAV2A0A0B4J234 112 aa14.83□□□□□ -0.04
HMGA1-205ENST00000447654 GAS8-AS1O95177 125 aa14.83□□□□□ -0.04
HMGA1-205ENST00000447654 SFTA2Q6UW10 78 aa14.83□□□□□ -0.04
HMGA1-205ENST00000447654 RAI1Q7Z5J4 1906 aaPredicted RBP14.83□□□□□ -0.04
HMGA1-205ENST00000447654 ORMDL2Q53FV1 153 aa14.83□□□□□ -0.04
HMGA1-205ENST00000447654 NRACQ8N912 160 aa14.83□□□□□ -0.04
HMGA1-205ENST00000447654 RPL27AP46776 148 aaKnown RBP14.82□□□□□ -0.04
HMGA1-205ENST00000447654 ATP5J2P56134 94 aa14.82□□□□□ -0.04
HMGA1-205ENST00000447654 ZNF672Q499Z4 452 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-205ENST00000447654 IMUPQ9GZP8 106 aa14.82□□□□□ -0.04
HMGA1-205ENST00000447654 MSRB1Q9NZV6 116 aa14.82□□□□□ -0.04
HMGA1-205ENST00000447654 SIGLEC9Q9Y336 463 aa14.82□□□□□ -0.04
HMGA1-205ENST00000447654 TACC2O95359 2948 aa14.82□□□□□ -0.04
HMGA1-205ENST00000447654 A0A0J9YY99 117 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 M0R2P5 195 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 M0R3E3 92 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 MRGPRG-AS1Q2M3A8 158 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 ZNF575Q86XF7 245 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 DEFB108BQ8NET1 73 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 NTN5Q8WTR8 489 aaPredicted RBP14.81□□□□□ -0.04
HMGA1-205ENST00000447654 TOMM6Q96B49 74 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 A0A1B0GX51 115 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 IGHV3-30P01768 117 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 IGHV3-30-5P0DP03 117 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 ATXN8Q156A1 80 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 PAPPA-AS1Q5QFB9 102 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 LINC00311Q8N616 119 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 TIMD4Q96H15 378 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 NCOR2Q9Y618 2525 aa14.81□□□□□ -0.04
HMGA1-205ENST00000447654 LGALS9O00182 355 aa14.8□□□□□ -0.04
HMGA1-205ENST00000447654 GATA4P43694 442 aa14.8□□□□□ -0.04
HMGA1-205ENST00000447654 TNFAIP6P98066 277 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-205ENST00000447654 GFRALQ6UXV0 394 aa14.8□□□□□ -0.04
HMGA1-205ENST00000447654 PLEKHB2Q96CS7 222 aa14.8□□□□□ -0.04
HMGA1-205ENST00000447654 CHD8Q9HCK8 2581 aa14.8□□□□□ -0.04
HMGA1-205ENST00000447654 NAV3Q8IVL0 2385 aa14.8□□□□□ -0.04
HMGA1-205ENST00000447654 TIMM23O14925 209 aa14.8□□□□□ -0.04
HMGA1-205ENST00000447654 GAFA1Q96PS6 74 aa14.8□□□□□ -0.04
HMGA1-205ENST00000447654 GATA1P15976 413 aaPredicted RBP14.79□□□□□ -0.04
HMGA1-205ENST00000447654 HERVK_113P61574 105 aa14.79□□□□□ -0.04
HMGA1-205ENST00000447654 SCGB3A1Q96QR1 104 aa14.79□□□□□ -0.04
HMGA1-205ENST00000447654 C21orf62Q9NYP8 219 aa14.79□□□□□ -0.04
HMGA1-205ENST00000447654 K7ENP7 123 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 IGKV1-17P01599 117 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 CCL8P80075 99 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 SLC25A29Q8N8R3 303 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 VKORC1Q9BQB6 163 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 CACNA1BQ00975 2339 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 KMT2BQ9UMN6 2715 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-205ENST00000447654 TRBV10-2A0A0K0K1G8 114 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 SMIM9A6NGZ8 99 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 EFNA4P52798 201 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 BSPH1Q075Z2 132 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 FAM216BQ8N7L0 139 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 RNF7Q9UBF6 113 aa14.78□□□□□ -0.04
HMGA1-205ENST00000447654 H3BMM0 161 aa14.77□□□□□ -0.04
HMGA1-205ENST00000447654 I3L2K1 104 aa14.77□□□□□ -0.04
HMGA1-205ENST00000447654 ADIPOQQ15848 244 aa14.77□□□□□ -0.04
HMGA1-205ENST00000447654 LINC01620Q4KN68 170 aa14.77□□□□□ -0.04
HMGA1-205ENST00000447654 UBE2WQ96B02 151 aa14.77□□□□□ -0.04
HMGA1-205ENST00000447654 CCL13Q99616 98 aa14.77□□□□□ -0.04
HMGA1-205ENST00000447654 ZNRD1Q9P1U0 126 aa14.77□□□□□ -0.04
HMGA1-205ENST00000447654 J3KT08 172 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms