RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 RAB5CP51148 216 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 ZFP69Q49AA0 526 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 C9orf62Q8N4C0 152 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 LINC00612Q8N6U2 182 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 TMEM75Q8N9X5 138 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 ZNF680Q8NEM1 530 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 FAM210BQ96KR6 192 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 SGK494Q96LW2 274 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 GSN-AS1Q9NRJ2 163 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 PSG8Q9UQ74 426 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 ARL2-SNX15V9GYD0 113 aa8.75□□□□□ -1.01
SSR4-205ENST00000447375 TRAV1-1A0A0B4J248 108 aa8.74□□□□□ -1.01
SSR4-205ENST00000447375 SNURFLB1AK76 121 aa8.74□□□□□ -1.01
SSR4-205ENST00000447375 FLI1Q01543 452 aaPredicted RBP8.74□□□□□ -1.01
SSR4-205ENST00000447375 IBA57Q5T440 356 aaKnown RBP8.74□□□□□ -1.01
SSR4-205ENST00000447375 HIST1H2BAQ96A08 127 aa8.74□□□□□ -1.01
SSR4-205ENST00000447375 LINC00479Q96M42 142 aa8.74□□□□□ -1.01
SSR4-205ENST00000447375 TCEAL7Q9BRU2 100 aa8.74□□□□□ -1.01
SSR4-205ENST00000447375 NDFIP1Q9BT67 221 aa8.74□□□□□ -1.01
SSR4-205ENST00000447375 TP53TG3Q9ULZ0 132 aa8.74□□□□□ -1.01
SSR4-205ENST00000447375 TRAV21A0A0B4J279 112 aa8.73□□□□□ -1.01
SSR4-205ENST00000447375 PEX7O00628 323 aa8.73□□□□□ -1.01
SSR4-205ENST00000447375 HTN3P15516 51 aa8.73□□□□□ -1.01
SSR4-205ENST00000447375 SULT1A2P50226 295 aa8.73□□□□□ -1.01
SSR4-205ENST00000447375 TDRG1Q3Y452 100 aa8.73□□□□□ -1.01
SSR4-205ENST00000447375 SAPCD1Q5SSQ6 148 aa8.73□□□□□ -1.01
SSR4-205ENST00000447375 CST9LP1Q5W188 147 aa8.73□□□□□ -1.01
SSR4-205ENST00000447375 PRNTQ86SH4 94 aa8.73□□□□□ -1.01
SSR4-205ENST00000447375 TRAV34A0A0B4J273 112 aa8.72□□□□□ -1.01
SSR4-205ENST00000447375 F6UZH7 168 aa8.72□□□□□ -1.01
SSR4-205ENST00000447375 PAGE4O60829 102 aa8.72□□□□□ -1.01
SSR4-205ENST00000447375 ATP5G1P05496 136 aa8.72□□□□□ -1.01
SSR4-205ENST00000447375 ATP5G3P48201 142 aa8.72□□□□□ -1.01
SSR4-205ENST00000447375 PPT1P50897 306 aa8.72□□□□□ -1.01
SSR4-205ENST00000447375 TCL1AP56279 114 aa8.72□□□□□ -1.01
SSR4-205ENST00000447375 MUC21Q5SSG8 566 aa8.72□□□□□ -1.01
SSR4-205ENST00000447375 FAM159AQ6UWV7 190 aa8.72□□□□□ -1.01
SSR4-205ENST00000447375 KLF12Q9Y4X4 402 aa8.72□□□□□ -1.01
SSR4-205ENST00000447375 A0A1B0GV50 99 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 GAGE12BA1L429 117 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 SPINK4O60575 86 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 GAGE7O76087 117 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 GAGE12FP0CL80 117 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 GAGE12GP0CL81 117 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 GAGE12IP0CL82 117 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 ZNF80P51504 273 aaPredicted RBP8.71□□□□□ -1.02
SSR4-205ENST00000447375 CCL20P78556 96 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 Q6ZTI0 123 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 C18orf15Q96N68 181 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 C8orf49Q96NF6 230 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 MDFICQ9P1T7 246 aa8.71□□□□□ -1.02
SSR4-205ENST00000447375 MYCBP2O75592 4640 aa8.7□□□□□ -1.02
SSR4-205ENST00000447375 TRBV6-1A0A0K0K1D8 114 aa8.7□□□□□ -1.02
SSR4-205ENST00000447375 F5H768 121 aa8.7□□□□□ -1.02
SSR4-205ENST00000447375 GCGP01275 180 aa8.7□□□□□ -1.02
SSR4-205ENST00000447375 SMUG1Q53HV7 270 aa8.7□□□□□ -1.02
SSR4-205ENST00000447375 TMEM88Q6PEY1 159 aa8.7□□□□□ -1.02
SSR4-205ENST00000447375 ZFP30Q9Y2G7 519 aa8.7□□□□□ -1.02
SSR4-205ENST00000447375 TRGV11A0A075B6L2 103 aa8.69□□□□□ -1.02
SSR4-205ENST00000447375 GNRH2O43555 120 aa8.69□□□□□ -1.02
SSR4-205ENST00000447375 PFN1P07737 140 aaKnown RBP8.69□□□□□ -1.02
SSR4-205ENST00000447375 ZNF415Q09FC8 603 aa8.69□□□□□ -1.02
SSR4-205ENST00000447375 TMEM183BQ1AE95 376 aa8.69□□□□□ -1.02
SSR4-205ENST00000447375 COX8CQ7Z4L0 72 aa8.69□□□□□ -1.02
SSR4-205ENST00000447375 TMEM183AQ8IXX5 376 aa8.69□□□□□ -1.02
SSR4-205ENST00000447375 FMC1Q96HJ9 113 aa8.69□□□□□ -1.02
SSR4-205ENST00000447375 KCNS1Q96KK3 526 aa8.69□□□□□ -1.02
SSR4-205ENST00000447375 C11orf21Q9P2W6 132 aa8.69□□□□□ -1.02
SSR4-205ENST00000447375 NAGKQ9UJ70 344 aa8.69□□□□□ -1.02
SSR4-205ENST00000447375 FAT1Q14517 4588 aa8.68□□□□□ -1.02
SSR4-205ENST00000447375 TRGV1A0A0A0MS02 117 aa8.68□□□□□ -1.02
SSR4-205ENST00000447375 IGHV3-16A0A0C4DH30 117 aa8.68□□□□□ -1.02
SSR4-205ENST00000447375 TEX46H3BTG2 121 aa8.68□□□□□ -1.02
SSR4-205ENST00000447375 S100A9P06702 114 aaKnown RBP8.68□□□□□ -1.02
SSR4-205ENST00000447375 NKX2-5P52952 324 aaPredicted RBP8.68□□□□□ -1.02
SSR4-205ENST00000447375 RNF212Q495C1 297 aa8.68□□□□□ -1.02
SSR4-205ENST00000447375 SPATA12Q7Z6I5 190 aa8.68□□□□□ -1.02
SSR4-205ENST00000447375 Q86TA4 180 aa8.68□□□□□ -1.02
SSR4-205ENST00000447375 SPXQ9BT56 116 aa8.68□□□□□ -1.02
SSR4-205ENST00000447375 SDF2L1Q9HCN8 221 aa8.68□□□□□ -1.02
SSR4-205ENST00000447375 MANBALQ9NQG1 85 aa8.68□□□□□ -1.02
SSR4-205ENST00000447375 GNG13Q9P2W3 67 aa8.68□□□□□ -1.02
SSR4-205ENST00000447375 TRGV2A0A075B6R0 118 aa8.67□□□□□ -1.02
SSR4-205ENST00000447375 FABP5P3A8MUU1 101 aa8.67□□□□□ -1.02
SSR4-205ENST00000447375 LTAP01374 205 aa8.67□□□□□ -1.02
SSR4-205ENST00000447375 HOXA5P20719 270 aa8.67□□□□□ -1.02
SSR4-205ENST00000447375 CRIP1P50238 77 aa8.67□□□□□ -1.02
SSR4-205ENST00000447375 UBE2G1P62253 170 aa8.67□□□□□ -1.02
SSR4-205ENST00000447375 C15orf53Q8NAA6 179 aa8.67□□□□□ -1.02
SSR4-205ENST00000447375 RASL10AQ92737 203 aa8.67□□□□□ -1.02
SSR4-205ENST00000447375 TYMSP04818 313 aa8.66□□□□□ -1.02
SSR4-205ENST00000447375 AKR1C3P42330 323 aa8.66□□□□□ -1.02
SSR4-205ENST00000447375 OR5I1Q13606 314 aa8.66□□□□□ -1.02
SSR4-205ENST00000447375 ZC2HC1AQ96GY0 325 aa8.66□□□□□ -1.02
SSR4-205ENST00000447375 TXNDC17Q9BRA2 123 aa8.66□□□□□ -1.02
SSR4-205ENST00000447375 MRPL16Q9NX20 251 aaKnown RBP8.66□□□□□ -1.02
SSR4-205ENST00000447375 BOLA1Q9Y3E2 137 aa8.66□□□□□ -1.02
SSR4-205ENST00000447375 VPS13BQ7Z7G8 4022 aa8.66□□□□□ -1.02
SSR4-205ENST00000447375 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.02
SSR4-205ENST00000447375 ALKAL2Q6UX46 152 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms