RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 ATP5SQ99766 215 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 SMIM3Q9BZL3 60 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 AGPAT4-IT1Q9H0P7 198 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 OR51M1Q9H341 326 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 MBD2Q9UBB5 411 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 FUT9Q9Y231 359 aa4.74□□□□□ -1.65
LRRC28-203ENST00000447360 PAGE4O60829 102 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 EIF3GO75821 320 aaKnown RBP eCLIP4.73□□□□□ -1.65
LRRC28-203ENST00000447360 CRYGDP07320 174 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 PDE6HQ13956 83 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 GFI1BQ5VTD9 330 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 NEGR1Q7Z3B1 354 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 BLNKQ8WV28 456 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 LINC00477Q96M19 166 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 ODF3Q96PU9 254 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 PYGO2Q9BRQ0 406 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 PRO0255Q9UI72 69 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 PRELID1Q9Y255 219 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 TIMM9Q9Y5J7 89 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 TNXBP22105 4242 aa4.73□□□□□ -1.65
LRRC28-203ENST00000447360 TRAV12-3A0A0B4J271 114 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 C17orf112F2Z3M2 114 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 RS1O15537 224 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 OR10J4P0C629 311 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 PET100P0DJ07 73 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 CD300CQ08708 224 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 FFAR4Q5NUL3 377 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 Q6ZQT7 251 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 C9orf47Q6ZRZ4 202 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 WFDC10BQ8IUB3 73 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 ZNF680Q8NEM1 530 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 VGLL1Q99990 258 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 PAXXQ9BUH6 204 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 MRPL32Q9BYC8 188 aaKnown RBP4.72□□□□□ -1.65
LRRC28-203ENST00000447360 HHLA3Q9XRX5 114 aa4.72□□□□□ -1.65
LRRC28-203ENST00000447360 TRGV11A0A075B6L2 103 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 TRGV1A0A0A0MS02 117 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 KLLNB2CW77 178 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 SLC25A5P05141 298 aaKnown RBP4.71□□□□□ -1.66
LRRC28-203ENST00000447360 CRISP2P16562 243 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 LEPP41159 167 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 CRYBA4P53673 196 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 RANP62826 216 aaKnown RBP4.71□□□□□ -1.66
LRRC28-203ENST00000447360 TDRG1Q3Y452 100 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 PRR9Q5T870 116 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 FAM122CQ6P4D5 195 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 SCXQ7RTU7 201 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 ZFAND2AQ8N6M9 145 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 C11orf72Q8NBR9 251 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 SCGB1C1Q8TD33 95 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 PHYHIPLQ96FC7 376 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 ST6GAL2Q96JF0 529 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 AQP10Q96PS8 301 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 MED28Q9H204 178 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 AAMDCQ9H7C9 122 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 GSN-AS1Q9NRJ2 163 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 KCNIP2Q9NS61 270 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 ZNF492Q9P255 531 aa4.71□□□□□ -1.66
LRRC28-203ENST00000447360 IGKV2-40A0A087WW87 121 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-203ENST00000447360 C7orf71A4D174 169 aa4.7□□□□□ -1.66
LRRC28-203ENST00000447360 GAGE12HA6NDE8 117 aa4.7□□□□□ -1.66
LRRC28-203ENST00000447360 IBA57-AS1B1ANH7 110 aa4.7□□□□□ -1.66
LRRC28-203ENST00000447360 G3V3Q6 166 aa4.7□□□□□ -1.66
LRRC28-203ENST00000447360 OR7C2O60412 319 aa4.7□□□□□ -1.66
LRRC28-203ENST00000447360 SPINK4O60575 86 aa4.7□□□□□ -1.66
LRRC28-203ENST00000447360 IGKV2D-40P01614 121 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-203ENST00000447360 ZNF415Q09FC8 603 aa4.7□□□□□ -1.66
LRRC28-203ENST00000447360 BTN1A1Q13410 526 aa4.7□□□□□ -1.66
LRRC28-203ENST00000447360 ACOT6Q3I5F7 207 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-203ENST00000447360 PET117Q6UWS5 81 aa4.7□□□□□ -1.66
LRRC28-203ENST00000447360 CHAC1Q9BUX1 264 aa4.7□□□□□ -1.66
LRRC28-203ENST00000447360 IGHV3-38A0A0C4DH36 116 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 PGPA6NDG6 321 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 K7EQD1 137 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 NMBP08949 121 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 GIPP09681 153 aaPredicted RBP4.69□□□□□ -1.66
LRRC28-203ENST00000447360 ATP6V0CP27449 155 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 SRIP30626 198 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 RNASE4P34096 147 aaKnown RBP4.69□□□□□ -1.66
LRRC28-203ENST00000447360 ZNF138P52744 262 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 RAB2AP61019 212 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 FHL2Q14192 279 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 RGS21Q2M5E4 152 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 ANXA2RQ3ZCQ2 193 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 LINC01556Q5JQF7 62 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 TMEM78Q5T7P6 136 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 HSD17B11Q8NBQ5 300 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 OR10G4Q8NGN3 311 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 OR10G9Q8NGN4 311 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 OR10G7Q8NGN6 311 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 OR2G3Q8NGZ4 309 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 SUN5Q8TC36 379 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 TP53TG3Q9ULZ0 132 aa4.69□□□□□ -1.66
LRRC28-203ENST00000447360 TRBV7-9A0A0J9YWB2 115 aa4.68□□□□□ -1.66
LRRC28-203ENST00000447360 A0A1W2PPV4 95 aa4.68□□□□□ -1.66
LRRC28-203ENST00000447360 RBAKDNA6NC62 111 aa4.68□□□□□ -1.66
LRRC28-203ENST00000447360 RNF222A6NCQ9 220 aa4.68□□□□□ -1.66
LRRC28-203ENST00000447360 HMGB3O15347 200 aaKnown RBP4.68□□□□□ -1.66
LRRC28-203ENST00000447360 IGLV2-8P01709 118 aa4.68□□□□□ -1.66
LRRC28-203ENST00000447360 IGHV3-53P01767 116 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms