RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 TREM1Q9NP99 234 aa12.37□□□□□ -0.43
COL9A1-205ENST00000447041 LY96Q9Y6Y9 160 aa12.37□□□□□ -0.43
COL9A1-205ENST00000447041 LOC100131303A0A0U1RQF7 123 aa12.36□□□□□ -0.43
COL9A1-205ENST00000447041 M0R2P5 195 aa12.36□□□□□ -0.43
COL9A1-205ENST00000447041 ORM1P02763 201 aa12.36□□□□□ -0.43
COL9A1-205ENST00000447041 CDC34P49427 236 aaPredicted RBP12.36□□□□□ -0.43
COL9A1-205ENST00000447041 HSD17B11Q8NBQ5 300 aa12.36□□□□□ -0.43
COL9A1-205ENST00000447041 OR4C5Q8NGB2 326 aa12.36□□□□□ -0.43
COL9A1-205ENST00000447041 SCRT2Q9NQ03 307 aa12.36□□□□□ -0.43
COL9A1-205ENST00000447041 DNAH10OSP0CZ25 163 aa12.35□□□□□ -0.43
COL9A1-205ENST00000447041 ERVFC1-1P60608 527 aa12.35□□□□□ -0.43
COL9A1-205ENST00000447041 ARL6IP6Q8N6S5 226 aa12.35□□□□□ -0.43
COL9A1-205ENST00000447041 SDF2L1Q9HCN8 221 aa12.35□□□□□ -0.43
COL9A1-205ENST00000447041 C9JCJ5 164 aa12.34□□□□□ -0.43
COL9A1-205ENST00000447041 STAG3L2P0CL84 134 aa12.34□□□□□ -0.43
COL9A1-205ENST00000447041 STAG3L3P0CL85 134 aa12.34□□□□□ -0.43
COL9A1-205ENST00000447041 OR2G3Q8NGZ4 309 aa12.34□□□□□ -0.43
COL9A1-205ENST00000447041 ZNF80P51504 273 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-205ENST00000447041 NFE4Q86UQ8 179 aa12.33□□□□□ -0.44
COL9A1-205ENST00000447041 ASB13Q8WXK3 278 aa12.33□□□□□ -0.44
COL9A1-205ENST00000447041 TXNDC17Q9BRA2 123 aa12.33□□□□□ -0.44
COL9A1-205ENST00000447041 TRAV9-2A0A087WT02 112 aa12.32□□□□□ -0.44
COL9A1-205ENST00000447041 EREGO14944 169 aa12.32□□□□□ -0.44
COL9A1-205ENST00000447041 TCRAP04437 139 aa12.32□□□□□ -0.44
COL9A1-205ENST00000447041 ATP6V0CP27449 155 aa12.32□□□□□ -0.44
COL9A1-205ENST00000447041 GCHFRP30047 84 aa12.32□□□□□ -0.44
COL9A1-205ENST00000447041 RAB24Q969Q5 203 aa12.32□□□□□ -0.44
COL9A1-205ENST00000447041 KCNS1Q96KK3 526 aa12.32□□□□□ -0.44
COL9A1-205ENST00000447041 NDFIP1Q9BT67 221 aa12.32□□□□□ -0.44
COL9A1-205ENST00000447041 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
COL9A1-205ENST00000447041 MSRB1Q9NZV6 116 aa12.32□□□□□ -0.44
COL9A1-205ENST00000447041 C11orf21Q9P2W6 132 aa12.32□□□□□ -0.44
COL9A1-205ENST00000447041 A0A087WTM6 91 aa12.31□□□□□ -0.44
COL9A1-205ENST00000447041 GATA1P15976 413 aaPredicted RBP12.31□□□□□ -0.44
COL9A1-205ENST00000447041 EVI2AP22794 236 aa12.31□□□□□ -0.44
COL9A1-205ENST00000447041 TMEM75Q8N9X5 138 aa12.31□□□□□ -0.44
COL9A1-205ENST00000447041 C5orf17Q8NAS9 161 aa12.31□□□□□ -0.44
COL9A1-205ENST00000447041 SUN5Q8TC36 379 aa12.31□□□□□ -0.44
COL9A1-205ENST00000447041 AQP10Q96PS8 301 aa12.31□□□□□ -0.44
COL9A1-205ENST00000447041 SH3BGRL3Q9H299 93 aa12.31□□□□□ -0.44
COL9A1-205ENST00000447041 PGPEP1Q9NXJ5 209 aa12.31□□□□□ -0.44
COL9A1-205ENST00000447041 SERTM2A0A1B0GWG4 89 aa12.3□□□□□ -0.44
COL9A1-205ENST00000447041 GGTLC3B5MD39 225 aa12.3□□□□□ -0.44
COL9A1-205ENST00000447041 DPPA3Q6W0C5 159 aa12.3□□□□□ -0.44
COL9A1-205ENST00000447041 NHLRC2Q8NBF2 726 aa12.3□□□□□ -0.44
COL9A1-205ENST00000447041 PSG8Q9UQ74 426 aa12.3□□□□□ -0.44
COL9A1-205ENST00000447041 FBLL1A6NHQ2 334 aaKnown RBP12.29□□□□□ -0.44
COL9A1-205ENST00000447041 GCGP01275 180 aa12.29□□□□□ -0.44
COL9A1-205ENST00000447041 IGLV2-11P01706 119 aa12.29□□□□□ -0.44
COL9A1-205ENST00000447041 CRYGDP07320 174 aa12.29□□□□□ -0.44
COL9A1-205ENST00000447041 Q5BKY6 102 aa12.29□□□□□ -0.44
COL9A1-205ENST00000447041 CDPF1Q6NVV7 123 aa12.29□□□□□ -0.44
COL9A1-205ENST00000447041 K7EP13 123 aa12.28□□□□□ -0.44
COL9A1-205ENST00000447041 PPT1P50897 306 aa12.28□□□□□ -0.44
COL9A1-205ENST00000447041 SUMO1P63165 101 aaKnown RBP12.28□□□□□ -0.44
COL9A1-205ENST00000447041 ZNF876PQ49A33 203 aa12.28□□□□□ -0.44
COL9A1-205ENST00000447041 CFAP126Q5VTH2 177 aa12.28□□□□□ -0.44
COL9A1-205ENST00000447041 SLC25A29Q8N8R3 303 aa12.28□□□□□ -0.44
COL9A1-205ENST00000447041 MED28Q9H204 178 aa12.28□□□□□ -0.44
COL9A1-205ENST00000447041 IGHV3-73A0A0B4J1V6 119 aa12.27□□□□□ -0.45
COL9A1-205ENST00000447041 K7EQM0 130 aa12.27□□□□□ -0.45
COL9A1-205ENST00000447041 RS1O15537 224 aa12.27□□□□□ -0.45
COL9A1-205ENST00000447041 PTTG1O95997 202 aa12.27□□□□□ -0.45
COL9A1-205ENST00000447041 MBP02144 154 aa12.27□□□□□ -0.45
COL9A1-205ENST00000447041 PFN1P07737 140 aaKnown RBP12.27□□□□□ -0.45
COL9A1-205ENST00000447041 SERF2P84101 59 aa12.27□□□□□ -0.45
COL9A1-205ENST00000447041 FLI1Q01543 452 aaPredicted RBP12.27□□□□□ -0.45
COL9A1-205ENST00000447041 PRNTQ86SH4 94 aa12.27□□□□□ -0.45
COL9A1-205ENST00000447041 C9orf85Q96MD7 179 aa12.27□□□□□ -0.45
COL9A1-205ENST00000447041 TMEM167BQ9NRX6 74 aa12.27□□□□□ -0.45
COL9A1-205ENST00000447041 EPDR1Q9UM22 224 aa12.27□□□□□ -0.45
COL9A1-205ENST00000447041 FAT1Q14517 4588 aa12.27□□□□□ -0.45
COL9A1-205ENST00000447041 TAAR5O14804 337 aa12.26□□□□□ -0.45
COL9A1-205ENST00000447041 CXorf1O96002 111 aa12.26□□□□□ -0.45
COL9A1-205ENST00000447041 TIRAPP58753 221 aa12.26□□□□□ -0.45
COL9A1-205ENST00000447041 ZFP69Q49AA0 526 aa12.26□□□□□ -0.45
COL9A1-205ENST00000447041 SMUG1Q53HV7 270 aa12.26□□□□□ -0.45
COL9A1-205ENST00000447041 SH2D6Q7Z4S9 175 aa12.26□□□□□ -0.45
COL9A1-205ENST00000447041 C10orf126Q8N4M7 172 aa12.26□□□□□ -0.45
COL9A1-205ENST00000447041 CYB561D1Q8N8Q1 229 aa12.26□□□□□ -0.45
COL9A1-205ENST00000447041 ACTR3CQ9C0K3 210 aaPredicted RBP12.26□□□□□ -0.45
COL9A1-205ENST00000447041 IGHV3-38A0A0C4DH36 116 aa12.25□□□□□ -0.45
COL9A1-205ENST00000447041 RNF222A6NCQ9 220 aa12.25□□□□□ -0.45
COL9A1-205ENST00000447041 PGPEP1LA6NFU8 196 aa12.25□□□□□ -0.45
COL9A1-205ENST00000447041 RNASE3P12724 160 aaKnown RBP12.25□□□□□ -0.45
COL9A1-205ENST00000447041 XGP55808 180 aa12.25□□□□□ -0.45
COL9A1-205ENST00000447041 KRTAP10-1P60331 282 aa12.25□□□□□ -0.45
COL9A1-205ENST00000447041 RHOHQ15669 191 aa12.25□□□□□ -0.45
COL9A1-205ENST00000447041 ZNF506Q5JVG8 444 aa12.25□□□□□ -0.45
COL9A1-205ENST00000447041 RPL7L1Q6DKI1 246 aaKnown RBP12.25□□□□□ -0.45
COL9A1-205ENST00000447041 TNFSF18Q9UNG2 199 aa12.25□□□□□ -0.45
COL9A1-205ENST00000447041 ZNF726P1Q15940 193 aa12.24□□□□□ -0.45
COL9A1-205ENST00000447041 LINC00479Q96M42 142 aa12.24□□□□□ -0.45
COL9A1-205ENST00000447041 PRADC1Q9BSG0 188 aa12.24□□□□□ -0.45
COL9A1-205ENST00000447041 BATF3Q9NR55 127 aa12.24□□□□□ -0.45
COL9A1-205ENST00000447041 TRAV34A0A0B4J273 112 aa12.23□□□□□ -0.45
COL9A1-205ENST00000447041 TRBV6-4A0A1B0GX49 114 aa12.23□□□□□ -0.45
COL9A1-205ENST00000447041 GIPP09681 153 aaPredicted RBP12.23□□□□□ -0.45
COL9A1-205ENST00000447041 LINC01556Q5JQF7 62 aa12.23□□□□□ -0.45
COL9A1-205ENST00000447041 FXYD6-FXYD2A0A087WZ82 144 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms