RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 ARL16Q0P5N6 197 aa4.98□□□□□ -1.61
HDAC9-216ENST00000446646 OPCMLQ14982 345 aa4.98□□□□□ -1.61
HDAC9-216ENST00000446646 SPATA31B1PQ5VZV4 182 aa4.98□□□□□ -1.61
HDAC9-216ENST00000446646 LINC00305Q7Z4B0 112 aa4.98□□□□□ -1.61
HDAC9-216ENST00000446646 OR11H7Q8NGC8 314 aa4.98□□□□□ -1.61
HDAC9-216ENST00000446646 DCANP1Q8TF63 244 aa4.98□□□□□ -1.61
HDAC9-216ENST00000446646 ISOC2Q96AB3 205 aa4.98□□□□□ -1.61
HDAC9-216ENST00000446646 SGK494Q96LW2 274 aa4.98□□□□□ -1.61
HDAC9-216ENST00000446646 SLC50A1Q9BRV3 221 aa4.98□□□□□ -1.61
HDAC9-216ENST00000446646 MRPL32Q9BYC8 188 aaKnown RBP4.98□□□□□ -1.61
HDAC9-216ENST00000446646 WDR61Q9GZS3 305 aaKnown RBP4.98□□□□□ -1.61
HDAC9-216ENST00000446646 DNAJC4Q9NNZ3 241 aa4.98□□□□□ -1.61
HDAC9-216ENST00000446646 PXMP4Q9Y6I8 212 aa4.98□□□□□ -1.61
HDAC9-216ENST00000446646 H0YIZ8 118 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 K7EP13 123 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 C4BPBP20851 252 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 GATA2P23769 480 aaPredicted RBP4.97□□□□□ -1.61
HDAC9-216ENST00000446646 TAS2R45P59539 299 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 RANP62826 216 aaKnown RBP4.97□□□□□ -1.61
HDAC9-216ENST00000446646 RNF212Q495C1 297 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 PSMG4Q5JS54 123 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 MIC13Q5XKP0 118 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 EBLN2Q6P2I7 272 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 UQCC3Q6UW78 93 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 LCN15Q6UWW0 184 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 C6orf223Q8N319 242 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 AQP10Q96PS8 301 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 C1QTNF4Q9BXJ3 329 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 BIN3Q9NQY0 253 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 RPRMQ9NS64 109 aa4.97□□□□□ -1.61
HDAC9-216ENST00000446646 TAAR5O14804 337 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 ACOT6Q3I5F7 207 aaPredicted RBP4.96□□□□□ -1.62
HDAC9-216ENST00000446646 LINC01620Q4KN68 170 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 KHDC3LQ587J8 217 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 FAM78BQ5VT40 261 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 LEMD1Q68G75 181 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 MORN3Q6PF18 240 aaPredicted RBP4.96□□□□□ -1.62
HDAC9-216ENST00000446646 FOXI2Q6ZQN5 318 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 FRZBQ92765 325 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 LINC00052Q96N35 136 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 UHRF2Q96PU4 802 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 MLST8Q9BVC4 326 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 KRTAP1-5Q9BYS1 174 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 SMIM3Q9BZL3 60 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 SPANXA1Q9NS26 97 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 TIMM9Q9Y5J7 89 aa4.96□□□□□ -1.62
HDAC9-216ENST00000446646 MUC2Q02817 5179 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 NBDYA0A0U1RRE5 68 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 PPP1R2P9O14990 202 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 DUSP14O95147 198 aaKnown RBP4.95□□□□□ -1.62
HDAC9-216ENST00000446646 TSPAN13O95857 204 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 OR10J4P0C629 311 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 KRTAP10-1P60331 282 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 RHOBP62745 196 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 EIF5AP63241 154 aaKnown RBP4.95□□□□□ -1.62
HDAC9-216ENST00000446646 PDE6HQ13956 83 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 ACTL10Q5JWF8 245 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 FFAR4Q5NUL3 377 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 MRPL52Q86TS9 123 aaKnown RBP4.95□□□□□ -1.62
HDAC9-216ENST00000446646 GNPNAT1Q96EK6 184 aaPredicted RBP4.95□□□□□ -1.62
HDAC9-216ENST00000446646 C17orf77Q96MU5 243 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 AAMDCQ9H7C9 122 aa4.95□□□□□ -1.62
HDAC9-216ENST00000446646 A0A0D9SG52 128 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 KANTRA0A1W2PQU2 76 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
HDAC9-216ENST00000446646 OR7C2O60412 319 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 ZNF253O75346 499 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 HLA-DRB4P13762 266 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 RPL35P42766 123 aaKnown RBP4.94□□□□□ -1.62
HDAC9-216ENST00000446646 SERF2P84101 59 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 PSG9Q00887 426 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 ZNF345Q14585 488 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 FAM74A1Q5RGS3 127 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 DNLZQ5SXM8 178 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 FAM24BQ8N5W8 94 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 VPS25Q9BRG1 176 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 PSMG3Q9BT73 122 aaPredicted RBP4.94□□□□□ -1.62
HDAC9-216ENST00000446646 SPANXB1Q9NS25 103 aaPredicted RBP4.94□□□□□ -1.62
HDAC9-216ENST00000446646 TMEM14CQ9P0S9 112 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 TNFSF18Q9UNG2 199 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 FUT9Q9Y231 359 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 HLA-DRB4X5D2U9 266 aa4.94□□□□□ -1.62
HDAC9-216ENST00000446646 HMSDA8MTL9 139 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 ZNF705EA8MWA4 302 aaPredicted RBP4.93□□□□□ -1.62
HDAC9-216ENST00000446646 H3BTX0 84 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 HIST1H1EP10412 219 aaKnown RBP4.93□□□□□ -1.62
HDAC9-216ENST00000446646 CSN1S1P47710 185 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 UBE2L3P68036 154 aaKnown RBP4.93□□□□□ -1.62
HDAC9-216ENST00000446646 AKR1C8PQ5T2L2 129 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 PATE2Q6UY27 113 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 PQLC2Q6ZP29 291 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 TRPT1Q86TN4 253 aaKnown RBP4.93□□□□□ -1.62
HDAC9-216ENST00000446646 OR4B1Q8NGF8 309 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 OR10J6PQ8NGY7 276 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 OR2G3Q8NGZ4 309 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 ZNRF2Q8NHG8 242 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 TMEM37Q8WXS4 190 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 PAXXQ9BUH6 204 aa4.93□□□□□ -1.62
HDAC9-216ENST00000446646 KNCNA6PVL3 124 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms