RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 NAT8BQ9UHF3 227 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 RNF11Q9Y3C5 154 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 KNTC1P50748 2209 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 ASCC3Q8N3C0 2202 aaKnown RBP2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 TRAV36DV7A0A075B6V5 113 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 A0A1B0GX51 115 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 HMSDA8MTL9 139 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 M0QZK8 103 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 CST7O76096 145 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 SHBGP04278 402 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 HLA-EP13747 358 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 CD52P31358 61 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 ARPP19P56211 112 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 DYNLT1P63172 113 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 SS18Q15532 418 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 OR8B8Q15620 311 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 CCDC153Q494R4 210 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 EIF5AL1Q6IS14 154 aaKnown RBP2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 SOSTDC1Q6X4U4 206 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 Q6ZQT0 140 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 AAED1Q7RTV5 226 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 TMEM229BQ8NBD8 167 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 NHP2Q9NX24 153 aaKnown RBP2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 PRO2289Q9P1D8 64 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 ATG2AQ2TAZ0 1938 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 ICE1Q9Y2F5 2266 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 TANC1Q9C0D5 1861 aa2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 RP1L1Q8IWN7 2480 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P48-201ENST00000446155 GOLGA4Q13439 2230 aaKnown RBP2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 CPAMD8Q8IZJ3 1885 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 BORCS7-ASMTA0A0B4J1R7 106 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 TRAV5A0A0B4J249 113 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 SDHAF1A6NFY7 115 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 GPX2P18283 190 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 AQP4P55087 323 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 MYL5Q02045 173 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 NNATQ16517 81 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 BRMS1LQ5PSV4 323 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 PHF5AQ7RTV0 110 aaKnown RBP2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 SLC30A7Q8NEW0 376 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 OR8B3Q8NGG8 313 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 ZC2HC1AQ96GY0 325 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 OR2H1Q9GZK4 316 aa2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 FLNAP21333 2647 aaKnown RBP2.25□□□□□ -2.05
HMGB1P48-201ENST00000446155 NUP210LQ5VU65 1888 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 SDCBPO00560 298 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 LYZL6O75951 148 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 NAPSAO96009 420 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 IGKV1-17P01599 117 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 PMP2P02689 132 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 CTSDP07339 412 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 P0C880 135 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 CKS1BP61024 79 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 HBBP68871 147 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 PSPHP78330 225 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 PSG9Q00887 426 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 ZNF345Q14585 488 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 Q6ZTI0 123 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 LRRC28Q86X40 367 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 TCEAL4Q96EI5 215 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 TCEAL2Q9H3H9 227 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 BCL2L10Q9HD36 194 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 HS3ST2Q9Y278 367 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 CSMD2Q7Z408 3487 aa2.24□□□□□ -2.05
HMGB1P48-201ENST00000446155 MCM3APO60318 1980 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 EML6Q6ZMW3 1958 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 KIAA2026Q5HYC2 2103 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 TLN2Q9Y4G6 2542 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 IGKV1D-17A0A075B6S4 117 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 TMEM189A5PLL7 270 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 J3QQQ9 107 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 HIST1H2BKO60814 126 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 HIST1H2BJP06899 126 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 DBIP07108 87 aaKnown RBP2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 PEBP1P30086 187 aaKnown RBP2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 SDC2P34741 201 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 AKR1C3P42330 323 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 RPL26P61254 145 aaKnown RBP2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 SLC38A11Q08AI6 406 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 ZNF714Q96N38 554 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 RPL26L1Q9UNX3 145 aaKnown RBP2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 TGP01266 2768 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 DCHS2Q6V1P9 2916 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 PTPRBP23467 1997 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 BSNQ9UPA5 3926 aa2.23□□□□□ -2.05
HMGB1P48-201ENST00000446155 COL5A1P20908 1838 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 CSPG4Q6UVK1 2322 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 IGKV1D-42A0A075B6H8 117 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 IGLV3-9A0A075B6K5 115 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 K7ERJ3 54 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 TIMM17BO60830 172 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 PGLYRP1O75594 196 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 FABP2P12104 132 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 RPL35P42766 123 aaKnown RBP2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 NDUFA6P56556 154 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 TAF9Q16594 264 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 SMIM21Q3B7S5 101 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 HCP5Q6MZN7 132 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 OR8I2Q8N0Y5 310 aa2.22□□□□□ -2.05
HMGB1P48-201ENST00000446155 LXNQ9BS40 222 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms