RNA–Protein interactions for RNA: ENST00000445752.5

CCDC144B-202, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2 BASIC

Gene CCDC144B, Length 2,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-202ENST00000445752 J3QKU1 62 aa12.02□□□□□ -0.48
CCDC144B-202ENST00000445752 HOXD3P31249 432 aaPredicted RBP12.02□□□□□ -0.48
CCDC144B-202ENST00000445752 SPANXN1Q5VSR9 72 aa12.02□□□□□ -0.48
CCDC144B-202ENST00000445752 FAM19A4Q96LR4 140 aa12.02□□□□□ -0.48
CCDC144B-202ENST00000445752 H0Y8G0 127 aa12.02□□□□□ -0.49
CCDC144B-202ENST00000445752 EVI2AP22794 236 aa12.02□□□□□ -0.49
CCDC144B-202ENST00000445752 MAP1LC3CQ9BXW4 147 aa12.02□□□□□ -0.49
CCDC144B-202ENST00000445752 HSPB8Q9UJY1 196 aa12.02□□□□□ -0.49
CCDC144B-202ENST00000445752 GAS8-AS1O95177 125 aa12.01□□□□□ -0.49
CCDC144B-202ENST00000445752 SAMD13Q5VXD3 122 aa12.01□□□□□ -0.49
CCDC144B-202ENST00000445752 C18orf65Q6ZTR6 163 aa12.01□□□□□ -0.49
CCDC144B-202ENST00000445752 RNF152Q8N8N0 203 aa12.01□□□□□ -0.49
CCDC144B-202ENST00000445752 CRXO43186 299 aaPredicted RBP12.01□□□□□ -0.49
CCDC144B-202ENST00000445752 ZNF688P0C7X2 276 aa12.01□□□□□ -0.49
CCDC144B-202ENST00000445752 DEFB136Q30KP8 78 aa12.01□□□□□ -0.49
CCDC144B-202ENST00000445752 Q8N2B8 174 aa12.01□□□□□ -0.49
CCDC144B-202ENST00000445752 KLHDC1Q8N7A1 406 aa12.01□□□□□ -0.49
CCDC144B-202ENST00000445752 WFDC12Q8WWY7 111 aa12.01□□□□□ -0.49
CCDC144B-202ENST00000445752 CCDC168Q8NDH2 2452 aa12□□□□□ -0.49
CCDC144B-202ENST00000445752 SNAI2O43623 268 aa12□□□□□ -0.49
CCDC144B-202ENST00000445752 ANXA2RQ3ZCQ2 193 aa12□□□□□ -0.49
CCDC144B-202ENST00000445752 PSMG4Q5JS54 123 aa12□□□□□ -0.49
CCDC144B-202ENST00000445752 SMIM15Q7Z3B0 74 aa12□□□□□ -0.49
CCDC144B-202ENST00000445752 LGALS9O00182 355 aa11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 TCF21O43680 179 aa11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 PPBPP02775 128 aa11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 S100A4P26447 101 aaKnown RBP11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 FXYD7P58549 80 aa11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 LINC00469Q8N7U9 141 aa11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 MCRIP2Q9BUT9 160 aaKnown RBP11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 C20orf202A1L168 122 aa11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 OR4C46A6NHA9 309 aa11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 EREGO14944 169 aa11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 SPRY2O43597 315 aa11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 CACNG7P62955 275 aa11.99□□□□□ -0.49
CCDC144B-202ENST00000445752 KMT2BQ9UMN6 2715 aaPredicted RBP11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 TRAV9-2A0A087WT02 112 aa11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 A0A096LNJ9 63 aa11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 GATA1P15976 413 aaPredicted RBP11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 ASIPP42127 132 aa11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 SLURP1P55000 103 aa11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 SNRPD3P62318 126 aaKnown RBP11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 KHDC1LQ5JSQ8 128 aa11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 APRG1Q8IVJ8 170 aa11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 MAP1LC3AQ9H492 121 aa11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 SONP18583 2426 aaKnown RBP11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 TRBV7-9A0A0J9YWB2 115 aa11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 M0R381 172 aa11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 TNFRSF6BO95407 300 aa11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 ZNF747Q9BV97 191 aa11.98□□□□□ -0.49
CCDC144B-202ENST00000445752 IGHV4-4A0A075B6R2 117 aa11.97□□□□□ -0.49
CCDC144B-202ENST00000445752 SNHG12Q9BXW3 62 aa11.97□□□□□ -0.49
CCDC144B-202ENST00000445752 FLNAP21333 2647 aaKnown RBP11.97□□□□□ -0.49
CCDC144B-202ENST00000445752 TRAV26-2A0A0B4J265 109 aa11.96□□□□□ -0.49
CCDC144B-202ENST00000445752 K7EQG2 157 aa11.96□□□□□ -0.49
CCDC144B-202ENST00000445752 GNRH2O43555 120 aa11.96□□□□□ -0.49
CCDC144B-202ENST00000445752 IGLC3P0DOY3 106 aa11.96□□□□□ -0.49
CCDC144B-202ENST00000445752 PET117Q6UWS5 81 aa11.96□□□□□ -0.49
CCDC144B-202ENST00000445752 MYO9AB2RTY4 2548 aa11.96□□□□□ -0.49
CCDC144B-202ENST00000445752 KLLNB2CW77 178 aa11.96□□□□□ -0.5
CCDC144B-202ENST00000445752 IGKV3-20P01619 116 aa11.96□□□□□ -0.5
CCDC144B-202ENST00000445752 HIST2H2BDQ6DRA6 164 aa11.96□□□□□ -0.5
CCDC144B-202ENST00000445752 TEX29Q8N6K0 151 aa11.96□□□□□ -0.5
CCDC144B-202ENST00000445752 DUX3Q96PT4 197 aa11.96□□□□□ -0.5
CCDC144B-202ENST00000445752 PMCHL2Q9BQD1 86 aa11.96□□□□□ -0.5
CCDC144B-202ENST00000445752 LAMTOR2Q9Y2Q5 125 aa11.96□□□□□ -0.5
CCDC144B-202ENST00000445752 AKAP9Q99996 3911 aa11.95□□□□□ -0.5
CCDC144B-202ENST00000445752 DNAJC9-AS1A6NH13 148 aa11.95□□□□□ -0.5
CCDC144B-202ENST00000445752 M0R143 59 aa11.95□□□□□ -0.5
CCDC144B-202ENST00000445752 IGLL1P15814 213 aa11.95□□□□□ -0.5
CCDC144B-202ENST00000445752 TCTEX1D4Q5JR98 221 aa11.95□□□□□ -0.5
CCDC144B-202ENST00000445752 TMEM86BQ8N661 226 aa11.95□□□□□ -0.5
CCDC144B-202ENST00000445752 UQCR10Q9UDW1 63 aa11.95□□□□□ -0.5
CCDC144B-202ENST00000445752 PHLDA3Q9Y5J5 127 aa11.95□□□□□ -0.5
CCDC144B-202ENST00000445752 HBDP02042 147 aa11.95□□□□□ -0.5
CCDC144B-202ENST00000445752 OR11H1Q8NG94 326 aa11.95□□□□□ -0.5
CCDC144B-202ENST00000445752 LINC01619G3V211 115 aa11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 LBHQ53QV2 105 aaPredicted RBP11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 ADAMTSL5Q6ZMM2 481 aa11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 OR2K2Q8NGT1 345 aa11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 C2orf88Q9BSF0 95 aa11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 PDZD2O15018 2839 aa11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 TRAV12-3A0A0B4J271 114 aa11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 A0A0J9YX75 114 aa11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 A0A1B0GV90 55 aa11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 hDV102S1A0JD36 115 aa11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 Q6ZN92 141 aa11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 Q6ZSV7 163 aa11.94□□□□□ -0.5
CCDC144B-202ENST00000445752 FAM159AQ6UWV7 190 aa11.93□□□□□ -0.5
CCDC144B-202ENST00000445752 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
CCDC144B-202ENST00000445752 DPF1Q92782 380 aa11.93□□□□□ -0.5
CCDC144B-202ENST00000445752 NXT2Q9NPJ8 142 aaKnown RBP11.93□□□□□ -0.5
CCDC144B-202ENST00000445752 RNASE3P12724 160 aaKnown RBP11.92□□□□□ -0.5
CCDC144B-202ENST00000445752 LINC01545Q5VT33 79 aa11.92□□□□□ -0.5
CCDC144B-202ENST00000445752 KLHL30-AS1Q8NEE0 82 aa11.92□□□□□ -0.5
CCDC144B-202ENST00000445752 HELZ2Q9BYK8 2649 aaKnown RBP11.92□□□□□ -0.5
CCDC144B-202ENST00000445752 TRAV12-2A0A075B6T6 113 aa11.92□□□□□ -0.5
CCDC144B-202ENST00000445752 LEPP41159 167 aa11.92□□□□□ -0.5
CCDC144B-202ENST00000445752 OR1N2Q8NGR9 330 aa11.92□□□□□ -0.5
CCDC144B-202ENST00000445752 SCRT2Q9NQ03 307 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms