RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 RHPN1-AS1Q9BWJ2 59 aa12.82□□□□□ -0.36
LAPTM4B-201ENST00000445593 FABP5P3A8MUU1 101 aa12.82□□□□□ -0.36
LAPTM4B-201ENST00000445593 KIR3DS1Q14943 382 aa12.82□□□□□ -0.36
LAPTM4B-201ENST00000445593 SPATA12Q7Z6I5 190 aa12.82□□□□□ -0.36
LAPTM4B-201ENST00000445593 A0A096LNT2 108 aa12.81□□□□□ -0.36
LAPTM4B-201ENST00000445593 A6NJY4 79 aa12.81□□□□□ -0.36
LAPTM4B-201ENST00000445593 PRSS3P2Q8NHM4 247 aa12.81□□□□□ -0.36
LAPTM4B-201ENST00000445593 GAS8-AS1O95177 125 aa12.81□□□□□ -0.36
LAPTM4B-201ENST00000445593 HIST1H1AQ02539 215 aaPredicted RBP12.81□□□□□ -0.36
LAPTM4B-201ENST00000445593 AGRNO00468 2067 aa12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 FASNP49327 2511 aaKnown RBP12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 A0A087X0K7 114 aa12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 A0A1B0GV72 72 aa12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 HOXA3O43365 443 aaPredicted RBP12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 PRR9Q5T870 116 aa12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 SS18L2Q9UHA2 77 aa12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 SNAI2O43623 268 aa12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 NUDT3O95989 172 aa12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 IGHV4-31P0DP07 118 aa12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 IFI27P40305 119 aaPredicted RBP12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 LOXL1Q08397 574 aaPredicted RBP12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 GPHB5Q86YW7 130 aa12.8□□□□□ -0.36
LAPTM4B-201ENST00000445593 NDUFA4O00483 81 aa12.79□□□□□ -0.36
LAPTM4B-201ENST00000445593 TCTAP57738 103 aa12.79□□□□□ -0.36
LAPTM4B-201ENST00000445593 USMG5Q96IX5 58 aa12.79□□□□□ -0.36
LAPTM4B-201ENST00000445593 IGKV3D-20A0A0C4DH25 116 aa12.79□□□□□ -0.36
LAPTM4B-201ENST00000445593 LEPROTL1O95214 131 aa12.79□□□□□ -0.36
LAPTM4B-201ENST00000445593 U3KQE9 123 aa12.79□□□□□ -0.36
LAPTM4B-201ENST00000445593 CR1P17927 2039 aa12.79□□□□□ -0.36
LAPTM4B-201ENST00000445593 IGKV3-20P01619 116 aa12.79□□□□□ -0.36
LAPTM4B-201ENST00000445593 EVI2AP22794 236 aa12.79□□□□□ -0.36
LAPTM4B-201ENST00000445593 DEFB113Q30KQ7 82 aa12.79□□□□□ -0.36
LAPTM4B-201ENST00000445593 ZNF575Q86XF7 245 aa12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 UFC1Q9Y3C8 167 aa12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 GATA1P15976 413 aaPredicted RBP12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 GATA3P23771 443 aa12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 CKS2P33552 79 aa12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 CRIP2P52943 208 aaPredicted RBP12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 CKS1BP61024 79 aa12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 KLK9Q2XQG4 91 aa12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 MRPL51Q4U2R6 128 aaKnown RBP12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 FA2HQ7L5A8 372 aa12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 PRELID3AQ96N28 172 aa12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 KLK9Q9UKQ9 250 aa12.78□□□□□ -0.36
LAPTM4B-201ENST00000445593 A0A0G2JLM5 398 aa12.77□□□□□ -0.36
LAPTM4B-201ENST00000445593 KHDC1LQ5JSQ8 128 aa12.77□□□□□ -0.36
LAPTM4B-201ENST00000445593 OR10AG1Q8NH19 301 aa12.77□□□□□ -0.36
LAPTM4B-201ENST00000445593 PEF1Q9UBV8 284 aaKnown RBP12.77□□□□□ -0.36
LAPTM4B-201ENST00000445593 IGLV1-40P01703 118 aa12.77□□□□□ -0.37
LAPTM4B-201ENST00000445593 DEFB136Q30KP8 78 aa12.77□□□□□ -0.37
LAPTM4B-201ENST00000445593 TMEM190Q8WZ59 177 aa12.77□□□□□ -0.37
LAPTM4B-201ENST00000445593 TRAV8-6A0A0B4J262 113 aa12.77□□□□□ -0.37
LAPTM4B-201ENST00000445593 Q6AWC8 147 aa12.77□□□□□ -0.37
LAPTM4B-201ENST00000445593 PRSS57Q6UWY2 283 aa12.77□□□□□ -0.37
LAPTM4B-201ENST00000445593 AP5S1Q9NUS5 200 aa12.77□□□□□ -0.37
LAPTM4B-201ENST00000445593 C2orf70A6NJV1 201 aa12.76□□□□□ -0.37
LAPTM4B-201ENST00000445593 H3BVH4 76 aa12.76□□□□□ -0.37
LAPTM4B-201ENST00000445593 FAM104BQ5XKR9 115 aa12.76□□□□□ -0.37
LAPTM4B-201ENST00000445593 DUX3Q96PT4 197 aa12.76□□□□□ -0.37
LAPTM4B-201ENST00000445593 DAZ1Q9NQZ3 744 aaKnown RBP12.76□□□□□ -0.37
LAPTM4B-201ENST00000445593 NPYP01303 97 aa12.75□□□□□ -0.37
LAPTM4B-201ENST00000445593 SYNJ2BPP57105 145 aa12.75□□□□□ -0.37
LAPTM4B-201ENST00000445593 TRAV26-2A0A0B4J265 109 aa12.75□□□□□ -0.37
LAPTM4B-201ENST00000445593 WFDC11Q8NEX6 87 aa12.75□□□□□ -0.37
LAPTM4B-201ENST00000445593 IGHV7-4-1A0A0J9YVY3 117 aa12.75□□□□□ -0.37
LAPTM4B-201ENST00000445593 RNASE4P34096 147 aaKnown RBP12.75□□□□□ -0.37
LAPTM4B-201ENST00000445593 C18orf65Q6ZTR6 163 aa12.75□□□□□ -0.37
LAPTM4B-201ENST00000445593 C9orf139Q6ZV77 190 aa12.75□□□□□ -0.37
LAPTM4B-201ENST00000445593 OR8A1Q8NGG7 326 aa12.75□□□□□ -0.37
LAPTM4B-201ENST00000445593 OR10J6PQ8NGY7 276 aa12.75□□□□□ -0.37
LAPTM4B-201ENST00000445593 TMEM70Q9BUB7 260 aa12.75□□□□□ -0.37
LAPTM4B-201ENST00000445593 GAGE10A6NGK3 116 aa12.74□□□□□ -0.37
LAPTM4B-201ENST00000445593 IGLC6P0CF74 106 aa12.74□□□□□ -0.37
LAPTM4B-201ENST00000445593 ORMDL3Q8N138 153 aa12.74□□□□□ -0.37
LAPTM4B-201ENST00000445593 ZNF688P0C7X2 276 aa12.74□□□□□ -0.37
LAPTM4B-201ENST00000445593 C11orf44Q8N8P7 122 aa12.74□□□□□ -0.37
LAPTM4B-201ENST00000445593 ATP6V0BQ99437 205 aa12.74□□□□□ -0.37
LAPTM4B-201ENST00000445593 SIGLEC8Q9NYZ4 499 aa12.74□□□□□ -0.37
LAPTM4B-201ENST00000445593 NIPBLQ6KC79 2804 aaeCLIP12.74□□□□□ -0.37
LAPTM4B-201ENST00000445593 JMJD1CQ15652 2540 aa12.74□□□□□ -0.37
LAPTM4B-201ENST00000445593 PSMB8P28062 276 aa12.73□□□□□ -0.37
LAPTM4B-201ENST00000445593 MRPL52Q86TS9 123 aaKnown RBP12.73□□□□□ -0.37
LAPTM4B-201ENST00000445593 VPREB3Q9UKI3 123 aa12.73□□□□□ -0.37
LAPTM4B-201ENST00000445593 UNC79Q9P2D8 2635 aa12.73□□□□□ -0.37
LAPTM4B-201ENST00000445593 hDV102S1A0JD36 115 aa12.73□□□□□ -0.37
LAPTM4B-201ENST00000445593 M0R381 172 aa12.73□□□□□ -0.37
LAPTM4B-201ENST00000445593 CFHR3Q02985 330 aa12.73□□□□□ -0.37
LAPTM4B-201ENST00000445593 RPS20P60866 119 aaKnown RBP12.73□□□□□ -0.37
LAPTM4B-201ENST00000445593 RAB37Q96AX2 223 aa12.73□□□□□ -0.37
LAPTM4B-201ENST00000445593 CHCHD1Q96BP2 118 aaKnown RBP12.73□□□□□ -0.37
LAPTM4B-201ENST00000445593 TAX1BP3O14907 124 aa12.72□□□□□ -0.37
LAPTM4B-201ENST00000445593 CTRLP40313 264 aa12.72□□□□□ -0.37
LAPTM4B-201ENST00000445593 ODF1Q14990 250 aa12.72□□□□□ -0.37
LAPTM4B-201ENST00000445593 SPANXN1Q5VSR9 72 aa12.72□□□□□ -0.37
LAPTM4B-201ENST00000445593 RBAKDNA6NC62 111 aa12.72□□□□□ -0.37
LAPTM4B-201ENST00000445593 OR4C46A6NHA9 309 aa12.72□□□□□ -0.37
LAPTM4B-201ENST00000445593 H3BUA1 57 aa12.72□□□□□ -0.37
LAPTM4B-201ENST00000445593 HERV-K104P63124 156 aa12.72□□□□□ -0.37
LAPTM4B-201ENST00000445593 DEFB104AQ8WTQ1 72 aa12.72□□□□□ -0.37
LAPTM4B-201ENST00000445593 SMPXQ9UHP9 88 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms