RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 GOLT1AQ6ZVE7 132 aa10.42□□□□□ -0.74
SEC13-213ENST00000445064 WFDC1Q9HC57 220 aa10.42□□□□□ -0.74
SEC13-213ENST00000445064 TRAV8-1A0A0A6YYK1 113 aa10.41□□□□□ -0.74
SEC13-213ENST00000445064 TRAV21A0A0B4J279 112 aa10.41□□□□□ -0.74
SEC13-213ENST00000445064 F6UZH7 168 aa10.41□□□□□ -0.74
SEC13-213ENST00000445064 TYMSP04818 313 aa10.41□□□□□ -0.74
SEC13-213ENST00000445064 CRYGDP07320 174 aa10.41□□□□□ -0.74
SEC13-213ENST00000445064 MARVELD1Q9BSK0 173 aa10.41□□□□□ -0.74
SEC13-213ENST00000445064 TREM1Q9NP99 234 aa10.41□□□□□ -0.74
SEC13-213ENST00000445064 A0A1W2PPV4 95 aa10.4□□□□□ -0.74
SEC13-213ENST00000445064 HMGB3O15347 200 aaKnown RBP10.4□□□□□ -0.74
SEC13-213ENST00000445064 SSNA1O43805 119 aa10.4□□□□□ -0.74
SEC13-213ENST00000445064 SMR3BP02814 79 aaPredicted RBP10.4□□□□□ -0.74
SEC13-213ENST00000445064 GCSHP23434 173 aa10.4□□□□□ -0.74
SEC13-213ENST00000445064 GNG5P63218 68 aa10.4□□□□□ -0.74
SEC13-213ENST00000445064 ACOT6Q3I5F7 207 aaPredicted RBP10.4□□□□□ -0.74
SEC13-213ENST00000445064 NHLRC2Q8NBF2 726 aa10.4□□□□□ -0.74
SEC13-213ENST00000445064 SGK494Q96LW2 274 aa10.4□□□□□ -0.74
SEC13-213ENST00000445064 PET100P0DJ07 73 aa10.39□□□□□ -0.75
SEC13-213ENST00000445064 GATA1P15976 413 aaPredicted RBP10.39□□□□□ -0.75
SEC13-213ENST00000445064 RAB2AP61019 212 aa10.39□□□□□ -0.75
SEC13-213ENST00000445064 Q5VSD8 79 aa10.39□□□□□ -0.75
SEC13-213ENST00000445064 FRZBQ92765 325 aa10.39□□□□□ -0.75
SEC13-213ENST00000445064 SDF2L1Q9HCN8 221 aa10.39□□□□□ -0.75
SEC13-213ENST00000445064 IGHV3-38A0A0C4DH36 116 aa10.38□□□□□ -0.75
SEC13-213ENST00000445064 PQLC2Q6ZP29 291 aa10.38□□□□□ -0.75
SEC13-213ENST00000445064 SH2D6Q7Z4S9 175 aa10.38□□□□□ -0.75
SEC13-213ENST00000445064 C10orf126Q8N4M7 172 aa10.38□□□□□ -0.75
SEC13-213ENST00000445064 ARL6IP6Q8N6S5 226 aa10.38□□□□□ -0.75
SEC13-213ENST00000445064 OR10G9Q8NGN4 311 aa10.38□□□□□ -0.75
SEC13-213ENST00000445064 OR10G7Q8NGN6 311 aa10.38□□□□□ -0.75
SEC13-213ENST00000445064 KCNS1Q96KK3 526 aa10.38□□□□□ -0.75
SEC13-213ENST00000445064 PSCAO43653 123 aa10.37□□□□□ -0.75
SEC13-213ENST00000445064 PPT1P50897 306 aa10.37□□□□□ -0.75
SEC13-213ENST00000445064 ASB13Q8WXK3 278 aa10.37□□□□□ -0.75
SEC13-213ENST00000445064 IGHV3-73A0A0B4J1V6 119 aa10.36□□□□□ -0.75
SEC13-213ENST00000445064 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
SEC13-213ENST00000445064 FBLL1A6NHQ2 334 aaKnown RBP10.36□□□□□ -0.75
SEC13-213ENST00000445064 ZNF80P51504 273 aaPredicted RBP10.36□□□□□ -0.75
SEC13-213ENST00000445064 HAMPP81172 84 aa10.36□□□□□ -0.75
SEC13-213ENST00000445064 ZNF876PQ49A33 203 aa10.36□□□□□ -0.75
SEC13-213ENST00000445064 DPPA3Q6W0C5 159 aa10.36□□□□□ -0.75
SEC13-213ENST00000445064 SLC25A29Q8N8R3 303 aa10.36□□□□□ -0.75
SEC13-213ENST00000445064 C11orf21Q9P2W6 132 aa10.36□□□□□ -0.75
SEC13-213ENST00000445064 IGLV5-52A0A0A0MRZ9 124 aa10.35□□□□□ -0.75
SEC13-213ENST00000445064 RS1O15537 224 aa10.35□□□□□ -0.75
SEC13-213ENST00000445064 PFN1P07737 140 aaKnown RBP10.35□□□□□ -0.75
SEC13-213ENST00000445064 TIRAPP58753 221 aa10.35□□□□□ -0.75
SEC13-213ENST00000445064 CFAP126Q5VTH2 177 aa10.35□□□□□ -0.75
SEC13-213ENST00000445064 Q9HAA7 133 aa10.35□□□□□ -0.75
SEC13-213ENST00000445064 TRAV8-6A0A0B4J262 113 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 PGPEP1LA6NFU8 196 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 IBA57-AS1B1ANH7 110 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 IGHV3-30P01768 117 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 IGHV3-33P01772 117 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 ARL14EPLP0DKL9 152 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 IGHV3-30-3P0DP02 117 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 IGHV3-30-5P0DP03 117 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 LINC01556Q5JQF7 62 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 OR10J3Q5JRS4 329 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 PRADC1Q9BSG0 188 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 NDFIP1Q9BT67 221 aa10.34□□□□□ -0.75
SEC13-213ENST00000445064 TAAR5O14804 337 aa10.33□□□□□ -0.76
SEC13-213ENST00000445064 CDC34P49427 236 aaPredicted RBP10.33□□□□□ -0.76
SEC13-213ENST00000445064 TMEM75Q8N9X5 138 aa10.33□□□□□ -0.76
SEC13-213ENST00000445064 PSG8Q9UQ74 426 aa10.33□□□□□ -0.76
SEC13-213ENST00000445064 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 CIDEAO60543 219 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 GCGP01275 180 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 TCRAP04437 139 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 STAG3L2P0CL84 134 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 STAG3L3P0CL85 134 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 DEFA1P59665 94 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 DEFA3P59666 94 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 SUMO1P63165 101 aaKnown RBP10.32□□□□□ -0.76
SEC13-213ENST00000445064 RHOHQ15669 191 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 C5orf17Q8NAS9 161 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 HSD17B11Q8NBQ5 300 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 RAB24Q969Q5 203 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 C9orf85Q96MD7 179 aa10.32□□□□□ -0.76
SEC13-213ENST00000445064 SERTM2A0A1B0GWG4 89 aa10.31□□□□□ -0.76
SEC13-213ENST00000445064 A6NHS1 94 aa10.31□□□□□ -0.76
SEC13-213ENST00000445064 FAM229AH3BQW9 127 aa10.31□□□□□ -0.76
SEC13-213ENST00000445064 IGLV2-11P01706 119 aa10.31□□□□□ -0.76
SEC13-213ENST00000445064 ZNF506Q5JVG8 444 aa10.31□□□□□ -0.76
SEC13-213ENST00000445064 LELP1Q5T871 98 aa10.31□□□□□ -0.76
SEC13-213ENST00000445064 PRNTQ86SH4 94 aa10.31□□□□□ -0.76
SEC13-213ENST00000445064 Q8N814 137 aa10.31□□□□□ -0.76
SEC13-213ENST00000445064 ATP6V0E2Q8NHE4 81 aa10.31□□□□□ -0.76
SEC13-213ENST00000445064 K7EQM0 130 aa10.3□□□□□ -0.76
SEC13-213ENST00000445064 RNASE3P12724 160 aaKnown RBP10.3□□□□□ -0.76
SEC13-213ENST00000445064 GCHFRP30047 84 aa10.3□□□□□ -0.76
SEC13-213ENST00000445064 FLI1Q01543 452 aaPredicted RBP10.3□□□□□ -0.76
SEC13-213ENST00000445064 SUN5Q8TC36 379 aa10.3□□□□□ -0.76
SEC13-213ENST00000445064 NTN5Q8WTR8 489 aaPredicted RBP10.3□□□□□ -0.76
SEC13-213ENST00000445064 GTSF1LQ9H1H1 148 aa10.3□□□□□ -0.76
SEC13-213ENST00000445064 EPDR1Q9UM22 224 aa10.3□□□□□ -0.76
SEC13-213ENST00000445064 ATP6V0CP27449 155 aa10.29□□□□□ -0.76
SEC13-213ENST00000445064 SMUG1Q53HV7 270 aa10.29□□□□□ -0.76
SEC13-213ENST00000445064 Q6ZSN1 163 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms