RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 C9JCJ5 164 aa14.32□□□□□ -0.12
VSX1-206ENST00000444511 M0R2P5 195 aa14.32□□□□□ -0.12
VSX1-206ENST00000444511 GNG5P63218 68 aa14.32□□□□□ -0.12
VSX1-206ENST00000444511 TXNDC17Q9BRA2 123 aa14.32□□□□□ -0.12
VSX1-206ENST00000444511 SDF2L1Q9HCN8 221 aa14.32□□□□□ -0.12
VSX1-206ENST00000444511 PGPEP1Q9NXJ5 209 aa14.32□□□□□ -0.12
VSX1-206ENST00000444511 WFDC10BQ8IUB3 73 aa14.31□□□□□ -0.12
VSX1-206ENST00000444511 TVP23CQ96ET8 276 aa14.31□□□□□ -0.12
VSX1-206ENST00000444511 KCNS1Q96KK3 526 aa14.31□□□□□ -0.12
VSX1-206ENST00000444511 TYMSP04818 313 aa14.3□□□□□ -0.12
VSX1-206ENST00000444511 ARL14EPLP0DKL9 152 aa14.3□□□□□ -0.12
VSX1-206ENST00000444511 EVI2AP22794 236 aa14.3□□□□□ -0.12
VSX1-206ENST00000444511 NDFIP1Q9BT67 221 aa14.3□□□□□ -0.12
VSX1-206ENST00000444511 APOBP04114 4563 aaKnown RBP14.29□□□□□ -0.12
VSX1-206ENST00000444511 K7EP13 123 aa14.29□□□□□ -0.12
VSX1-206ENST00000444511 CDC34P49427 236 aaPredicted RBP14.29□□□□□ -0.12
VSX1-206ENST00000444511 HSD17B11Q8NBQ5 300 aa14.29□□□□□ -0.12
VSX1-206ENST00000444511 ASB13Q8WXK3 278 aa14.29□□□□□ -0.12
VSX1-206ENST00000444511 MSRB1Q9NZV6 116 aa14.29□□□□□ -0.12
VSX1-206ENST00000444511 SERTM2A0A1B0GWG4 89 aa14.28□□□□□ -0.12
VSX1-206ENST00000444511 SGK494Q96LW2 274 aa14.28□□□□□ -0.12
VSX1-206ENST00000444511 ALG5Q9Y673 324 aa14.28□□□□□ -0.12
VSX1-206ENST00000444511 DNAH10OSP0CZ25 163 aa14.27□□□□□ -0.13
VSX1-206ENST00000444511 FUSP35637 526 aaKnown RBP eCLIP14.27□□□□□ -0.13
VSX1-206ENST00000444511 CDPF1Q6NVV7 123 aa14.27□□□□□ -0.13
VSX1-206ENST00000444511 SH2D6Q7Z4S9 175 aa14.27□□□□□ -0.13
VSX1-206ENST00000444511 NHLRC2Q8NBF2 726 aa14.27□□□□□ -0.13
VSX1-206ENST00000444511 OR2G3Q8NGZ4 309 aa14.27□□□□□ -0.13
VSX1-206ENST00000444511 LOC100131303A0A0U1RQF7 123 aa14.26□□□□□ -0.13
VSX1-206ENST00000444511 K7EQM0 130 aa14.26□□□□□ -0.13
VSX1-206ENST00000444511 STAG3L2P0CL84 134 aa14.26□□□□□ -0.13
VSX1-206ENST00000444511 STAG3L3P0CL85 134 aa14.26□□□□□ -0.13
VSX1-206ENST00000444511 C5orf17Q8NAS9 161 aa14.26□□□□□ -0.13
VSX1-206ENST00000444511 A0A087WTM6 91 aa14.25□□□□□ -0.13
VSX1-206ENST00000444511 TCRAP04437 139 aa14.25□□□□□ -0.13
VSX1-206ENST00000444511 GATA1P15976 413 aaPredicted RBP14.25□□□□□ -0.13
VSX1-206ENST00000444511 RAB24Q969Q5 203 aa14.25□□□□□ -0.13
VSX1-206ENST00000444511 PSMG3Q9BT73 122 aaPredicted RBP14.25□□□□□ -0.13
VSX1-206ENST00000444511 FBLL1A6NHQ2 334 aaKnown RBP14.24□□□□□ -0.13
VSX1-206ENST00000444511 MBP02144 154 aa14.24□□□□□ -0.13
VSX1-206ENST00000444511 CRYGDP07320 174 aa14.24□□□□□ -0.13
VSX1-206ENST00000444511 GCHFRP30047 84 aa14.24□□□□□ -0.13
VSX1-206ENST00000444511 PPT1P50897 306 aa14.24□□□□□ -0.13
VSX1-206ENST00000444511 ZNF876PQ49A33 203 aa14.24□□□□□ -0.13
VSX1-206ENST00000444511 C10orf126Q8N4M7 172 aa14.24□□□□□ -0.13
VSX1-206ENST00000444511 AQP10Q96PS8 301 aa14.24□□□□□ -0.13
VSX1-206ENST00000444511 TAAR5O14804 337 aa14.23□□□□□ -0.13
VSX1-206ENST00000444511 ATP6V0CP27449 155 aa14.23□□□□□ -0.13
VSX1-206ENST00000444511 ZFP69Q49AA0 526 aa14.23□□□□□ -0.13
VSX1-206ENST00000444511 PSG8Q9UQ74 426 aa14.23□□□□□ -0.13
VSX1-206ENST00000444511 GCGP01275 180 aa14.22□□□□□ -0.13
VSX1-206ENST00000444511 ZNF80P51504 273 aaPredicted RBP14.22□□□□□ -0.13
VSX1-206ENST00000444511 TIRAPP58753 221 aa14.22□□□□□ -0.13
VSX1-206ENST00000444511 SUMO1P63165 101 aaKnown RBP14.22□□□□□ -0.13
VSX1-206ENST00000444511 SERF2P84101 59 aa14.22□□□□□ -0.13
VSX1-206ENST00000444511 SUN5Q8TC36 379 aa14.22□□□□□ -0.13
VSX1-206ENST00000444511 MED28Q9H204 178 aa14.22□□□□□ -0.13
VSX1-206ENST00000444511 TMEM167BQ9NRX6 74 aa14.22□□□□□ -0.13
VSX1-206ENST00000444511 C11orf21Q9P2W6 132 aa14.22□□□□□ -0.13
VSX1-206ENST00000444511 IGHV3-38A0A0C4DH36 116 aa14.21□□□□□ -0.13
VSX1-206ENST00000444511 CIDEAO60543 219 aa14.21□□□□□ -0.13
VSX1-206ENST00000444511 CXorf1O96002 111 aa14.21□□□□□ -0.13
VSX1-206ENST00000444511 FLI1Q01543 452 aaPredicted RBP14.21□□□□□ -0.13
VSX1-206ENST00000444511 SLC25A29Q8N8R3 303 aa14.21□□□□□ -0.13
VSX1-206ENST00000444511 PRADC1Q9BSG0 188 aa14.21□□□□□ -0.13
VSX1-206ENST00000444511 ACTR3CQ9C0K3 210 aaPredicted RBP14.21□□□□□ -0.13
VSX1-206ENST00000444511 EPDR1Q9UM22 224 aa14.21□□□□□ -0.13
VSX1-206ENST00000444511 GGTLC3B5MD39 225 aa14.2□□□□□ -0.14
VSX1-206ENST00000444511 RS1O15537 224 aa14.2□□□□□ -0.14
VSX1-206ENST00000444511 PFN1P07737 140 aaKnown RBP14.2□□□□□ -0.14
VSX1-206ENST00000444511 SMUG1Q53HV7 270 aa14.2□□□□□ -0.14
VSX1-206ENST00000444511 CFAP126Q5VTH2 177 aa14.2□□□□□ -0.14
VSX1-206ENST00000444511 PRNTQ86SH4 94 aa14.2□□□□□ -0.14
VSX1-206ENST00000444511 CYB561D1Q8N8Q1 229 aa14.2□□□□□ -0.14
VSX1-206ENST00000444511 SH3BGRL3Q9H299 93 aa14.2□□□□□ -0.14
VSX1-206ENST00000444511 IGHV3-73A0A0B4J1V6 119 aa14.19□□□□□ -0.14
VSX1-206ENST00000444511 EPM2AB3EWF7 344 aa14.19□□□□□ -0.14
VSX1-206ENST00000444511 PTTG1O95997 202 aa14.19□□□□□ -0.14
VSX1-206ENST00000444511 RHOHQ15669 191 aa14.19□□□□□ -0.14
VSX1-206ENST00000444511 TMEM75Q8N9X5 138 aa14.19□□□□□ -0.14
VSX1-206ENST00000444511 TNFSF18Q9UNG2 199 aa14.19□□□□□ -0.14
VSX1-206ENST00000444511 TRAV8-6A0A0B4J262 113 aa14.18□□□□□ -0.14
VSX1-206ENST00000444511 TRBV6-4A0A1B0GX49 114 aa14.18□□□□□ -0.14
VSX1-206ENST00000444511 PSCAO43653 123 aa14.18□□□□□ -0.14
VSX1-206ENST00000444511 IGLV2-11P01706 119 aa14.18□□□□□ -0.14
VSX1-206ENST00000444511 DPPA3Q6W0C5 159 aa14.18□□□□□ -0.14
VSX1-206ENST00000444511 C9orf85Q96MD7 179 aa14.18□□□□□ -0.14
VSX1-206ENST00000444511 BATF3Q9NR55 127 aa14.18□□□□□ -0.14
VSX1-206ENST00000444511 LINC01556Q5JQF7 62 aa14.17□□□□□ -0.14
VSX1-206ENST00000444511 OR10J3Q5JRS4 329 aa14.17□□□□□ -0.14
VSX1-206ENST00000444511 SAPCD1Q5SSQ6 148 aa14.17□□□□□ -0.14
VSX1-206ENST00000444511 INO80EQ8NBZ0 244 aaPredicted RBP14.17□□□□□ -0.14
VSX1-206ENST00000444511 BOLA1Q9Y3E2 137 aa14.17□□□□□ -0.14
VSX1-206ENST00000444511 PGPEP1LA6NFU8 196 aa14.16□□□□□ -0.14
VSX1-206ENST00000444511 XGP55808 180 aa14.16□□□□□ -0.14
VSX1-206ENST00000444511 KRTAP10-1P60331 282 aa14.16□□□□□ -0.14
VSX1-206ENST00000444511 Q5BKY6 102 aa14.16□□□□□ -0.14
VSX1-206ENST00000444511 ZNF506Q5JVG8 444 aa14.16□□□□□ -0.14
VSX1-206ENST00000444511 PTH2Q96A98 100 aa14.16□□□□□ -0.14
VSX1-206ENST00000444511 GIPP09681 153 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms