RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 FLI1Q01543 452 aaPredicted RBP13.03□□□□□ -0.32
ATPAF2-201ENST00000444058 FHL2Q14192 279 aa13.03□□□□□ -0.32
ATPAF2-201ENST00000444058 SDF2L1Q9HCN8 221 aa13.03□□□□□ -0.32
ATPAF2-201ENST00000444058 PSG8Q9UQ74 426 aa13.03□□□□□ -0.32
ATPAF2-201ENST00000444058 HHLA3Q9XRX5 114 aa13.03□□□□□ -0.32
ATPAF2-201ENST00000444058 CRYBA4P53673 196 aa13.02□□□□□ -0.33
ATPAF2-201ENST00000444058 SAPCD1Q5SSQ6 148 aa13.02□□□□□ -0.33
ATPAF2-201ENST00000444058 SGK494Q96LW2 274 aa13.02□□□□□ -0.33
ATPAF2-201ENST00000444058 A0A1W2PPQ1 181 aa13.01□□□□□ -0.33
ATPAF2-201ENST00000444058 HMSDA8MTL9 139 aa13.01□□□□□ -0.33
ATPAF2-201ENST00000444058 M0R2P5 195 aa13.01□□□□□ -0.33
ATPAF2-201ENST00000444058 GNRH2O43555 120 aa13.01□□□□□ -0.33
ATPAF2-201ENST00000444058 IGHV3-53P01767 116 aa13.01□□□□□ -0.33
ATPAF2-201ENST00000444058 TYMSP04818 313 aa13.01□□□□□ -0.33
ATPAF2-201ENST00000444058 PFN1P07737 140 aaKnown RBP13.01□□□□□ -0.33
ATPAF2-201ENST00000444058 ZFP69Q49AA0 526 aa13.01□□□□□ -0.33
ATPAF2-201ENST00000444058 TTC32Q5I0X7 151 aa13.01□□□□□ -0.33
ATPAF2-201ENST00000444058 KCNRGQ8N5I3 272 aa13.01□□□□□ -0.33
ATPAF2-201ENST00000444058 ICOSQ9Y6W8 199 aa13.01□□□□□ -0.33
ATPAF2-201ENST00000444058 BTF3P20290 206 aaKnown RBP13□□□□□ -0.33
ATPAF2-201ENST00000444058 SMUG1Q53HV7 270 aa13□□□□□ -0.33
ATPAF2-201ENST00000444058 C6orf223Q8N319 242 aa13□□□□□ -0.33
ATPAF2-201ENST00000444058 SMLR1H3BR10 107 aa12.99□□□□□ -0.33
ATPAF2-201ENST00000444058 GCGP01275 180 aa12.99□□□□□ -0.33
ATPAF2-201ENST00000444058 PPT1P50897 306 aa12.99□□□□□ -0.33
ATPAF2-201ENST00000444058 ZNF80P51504 273 aaPredicted RBP12.99□□□□□ -0.33
ATPAF2-201ENST00000444058 MRPL23Q16540 153 aaKnown RBP12.99□□□□□ -0.33
ATPAF2-201ENST00000444058 PRNTQ86SH4 94 aa12.99□□□□□ -0.33
ATPAF2-201ENST00000444058 HIST1H2BAQ96A08 127 aa12.99□□□□□ -0.33
ATPAF2-201ENST00000444058 ZNF479Q96JC4 524 aa12.99□□□□□ -0.33
ATPAF2-201ENST00000444058 C8orf49Q96NF6 230 aa12.99□□□□□ -0.33
ATPAF2-201ENST00000444058 TRAV4A0A0B4J268 109 aa12.98□□□□□ -0.33
ATPAF2-201ENST00000444058 TRGV4A0A0C4DH28 118 aa12.98□□□□□ -0.33
ATPAF2-201ENST00000444058 A0A0D9SG52 128 aa12.98□□□□□ -0.33
ATPAF2-201ENST00000444058 MAP1LC3B2A6NCE7 125 aa12.98□□□□□ -0.33
ATPAF2-201ENST00000444058 FAM74A7A6NL05 159 aa12.98□□□□□ -0.33
ATPAF2-201ENST00000444058 IFNA7P01567 189 aa12.98□□□□□ -0.33
ATPAF2-201ENST00000444058 MAP1LC3BQ9GZQ8 125 aa12.98□□□□□ -0.33
ATPAF2-201ENST00000444058 ORM1P02763 201 aa12.97□□□□□ -0.33
ATPAF2-201ENST00000444058 SEC11BP0C7V7 166 aa12.97□□□□□ -0.33
ATPAF2-201ENST00000444058 FGF8P55075 233 aaPredicted RBP12.97□□□□□ -0.33
ATPAF2-201ENST00000444058 STOML3Q8TAV4 291 aa12.97□□□□□ -0.33
ATPAF2-201ENST00000444058 TCEAL7Q9BRU2 100 aa12.97□□□□□ -0.33
ATPAF2-201ENST00000444058 UMAD1C9J7I0 102 aa12.96□□□□□ -0.33
ATPAF2-201ENST00000444058 SFTA3P0C7M3 94 aa12.96□□□□□ -0.33
ATPAF2-201ENST00000444058 FHITP49789 147 aa12.96□□□□□ -0.33
ATPAF2-201ENST00000444058 UBE2G2P60604 165 aa12.96□□□□□ -0.33
ATPAF2-201ENST00000444058 NEGR1Q7Z3B1 354 aa12.96□□□□□ -0.33
ATPAF2-201ENST00000444058 OR4C5Q8NGB2 326 aa12.96□□□□□ -0.33
ATPAF2-201ENST00000444058 OR11H4Q8NGC9 324 aa12.96□□□□□ -0.33
ATPAF2-201ENST00000444058 C11orf21Q9P2W6 132 aa12.96□□□□□ -0.33
ATPAF2-201ENST00000444058 ARL2-SNX15V9GYD0 113 aa12.96□□□□□ -0.33
ATPAF2-201ENST00000444058 PEX7O00628 323 aa12.95□□□□□ -0.34
ATPAF2-201ENST00000444058 CIDEAO60543 219 aa12.95□□□□□ -0.34
ATPAF2-201ENST00000444058 PTH2Q96A98 100 aa12.95□□□□□ -0.34
ATPAF2-201ENST00000444058 LINC00479Q96M42 142 aa12.95□□□□□ -0.34
ATPAF2-201ENST00000444058 PKD1P98161 4303 aa12.94□□□□□ -0.34
ATPAF2-201ENST00000444058 KANTRA0A1W2PQU2 76 aa12.94□□□□□ -0.34
ATPAF2-201ENST00000444058 EIF5AP63241 154 aaKnown RBP12.94□□□□□ -0.34
ATPAF2-201ENST00000444058 LYPD5Q6UWN5 251 aa12.94□□□□□ -0.34
ATPAF2-201ENST00000444058 COX8CQ7Z4L0 72 aa12.94□□□□□ -0.34
ATPAF2-201ENST00000444058 C9orf85Q96MD7 179 aa12.94□□□□□ -0.34
ATPAF2-201ENST00000444058 KRTAP1-5Q9BYS1 174 aa12.94□□□□□ -0.34
ATPAF2-201ENST00000444058 DNAH11Q96DT5 4516 aa12.94□□□□□ -0.34
ATPAF2-201ENST00000444058 PKHD1P08F94 4074 aa12.94□□□□□ -0.34
ATPAF2-201ENST00000444058 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 FABP5P3A8MUU1 101 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 C9JCJ5 164 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 K7EQD1 137 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 SIVA1O15304 175 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 BCL2L11O43521 198 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 SRIP30626 198 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 ZNF876PQ49A33 203 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 DPPA3Q6W0C5 159 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 Q86TA4 180 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 PCNPQ8WW12 178 aaKnown RBP12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 MBD3L1Q8WWY6 194 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 ZFP30Q9Y2G7 519 aa12.93□□□□□ -0.34
ATPAF2-201ENST00000444058 HERC2O95714 4834 aa12.92□□□□□ -0.34
ATPAF2-201ENST00000444058 TNP2Q05952 138 aa12.92□□□□□ -0.34
ATPAF2-201ENST00000444058 KIAA1109Q2LD37 5005 aa12.92□□□□□ -0.34
ATPAF2-201ENST00000444058 SH2D6Q7Z4S9 175 aa12.92□□□□□ -0.34
ATPAF2-201ENST00000444058 TXNDC17Q9BRA2 123 aa12.92□□□□□ -0.34
ATPAF2-201ENST00000444058 ZNF471Q9BX82 626 aaPredicted RBP12.92□□□□□ -0.34
ATPAF2-201ENST00000444058 TRBV6-1A0A0K0K1D8 114 aa12.91□□□□□ -0.34
ATPAF2-201ENST00000444058 NXPH4O95158 308 aa12.91□□□□□ -0.34
ATPAF2-201ENST00000444058 GYPEP15421 78 aa12.91□□□□□ -0.34
ATPAF2-201ENST00000444058 PIK3CD-AS1Q5SR53 167 aa12.91□□□□□ -0.34
ATPAF2-201ENST00000444058 FMC1Q96HJ9 113 aa12.91□□□□□ -0.34
ATPAF2-201ENST00000444058 IGKV3D-20A0A0C4DH25 116 aa12.9□□□□□ -0.34
ATPAF2-201ENST00000444058 RS1O15537 224 aa12.9□□□□□ -0.34
ATPAF2-201ENST00000444058 MED14OSP0DP75 135 aa12.9□□□□□ -0.34
ATPAF2-201ENST00000444058 RNASE3P12724 160 aaKnown RBP12.9□□□□□ -0.34
ATPAF2-201ENST00000444058 GATA1P15976 413 aaPredicted RBP12.9□□□□□ -0.34
ATPAF2-201ENST00000444058 SFT2D1Q8WV19 159 aa12.9□□□□□ -0.34
ATPAF2-201ENST00000444058 DYNC1H1Q14204 4646 aaKnown RBP12.9□□□□□ -0.34
ATPAF2-201ENST00000444058 K7EP13 123 aa12.89□□□□□ -0.35
ATPAF2-201ENST00000444058 UBE2G1P62253 170 aa12.89□□□□□ -0.35
ATPAF2-201ENST00000444058 CFAP126Q5VTH2 177 aa12.89□□□□□ -0.35
ATPAF2-201ENST00000444058 CST9LP1Q5W188 147 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms