RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 IGKV2-40A0A087WW87 121 aaPredicted RBP2.11□□□□□ -2.07
LINC00393-201ENST00000443621 IGKV3D-20A0A0C4DH25 116 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 TRBV6-5A0A0K0K1A5 114 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 C7orf71A4D174 169 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 ZNF705FA8MVS1 300 aaPredicted RBP2.11□□□□□ -2.07
LINC00393-201ENST00000443621 HSBP1O75506 76 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 LY6G6DO95868 133 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 IGKV2D-40P01614 121 aaPredicted RBP2.11□□□□□ -2.07
LINC00393-201ENST00000443621 IGHV3-11P01762 117 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 ORM1P02763 201 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 LINC00614P0C842 121 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 NTF3P20783 257 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 SRIP30626 198 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 ASIPP42127 132 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 PCP4P48539 62 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 SYNJ2BPP57105 145 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 RPL11P62913 178 aaKnown RBP2.11□□□□□ -2.07
LINC00393-201ENST00000443621 SLAQ13239 276 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 ZNF124Q15973 351 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 PMCHL1Q16048 86 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 BEAN1Q3B7T3 259 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 LGALS9BQ3B8N2 356 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 LBHQ53QV2 105 aaPredicted RBP2.11□□□□□ -2.07
LINC00393-201ENST00000443621 LYZL1Q6UWQ5 148 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 AMTNQ6UX39 209 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 LCNL1Q6ZST4 164 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 BAGE3Q86Y29 109 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 SYT8Q8NBV8 401 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 KLHL30-AS1Q8NEE0 82 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 WFDC9Q8NEX5 89 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 DLX4Q92988 240 aaPredicted RBP2.11□□□□□ -2.07
LINC00393-201ENST00000443621 C18orf15Q96N68 181 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 C8orf49Q96NF6 230 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 DPH3P1Q9H4G8 78 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 AP5S1Q9NUS5 200 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 AURKAIP1Q9NWT8 199 aaPredicted RBP2.11□□□□□ -2.07
LINC00393-201ENST00000443621 HSPB8Q9UJY1 196 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 FLNAP21333 2647 aaKnown RBP2.11□□□□□ -2.07
LINC00393-201ENST00000443621 IGHV1OR15-1A0A075B7D0 117 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 IGHV3-35A0A0C4DH35 117 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 SMIM9A6NGZ8 99 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 IFITM10A6NMD0 228 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 ADARB2-AS1A8MUL3 147 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 A8MWV9 139 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 OR11H12B2RN74 326 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 PRAC2D3DTV9 90 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 H3BMM0 161 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 H3BTX0 84 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 H7C1H1 209 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 RHODO00212 210 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 CA1P00915 261 aaPredicted RBP2.1□□□□□ -2.07
LINC00393-201ENST00000443621 ARMS2P0C7Q2 107 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 GZMBP10144 247 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 S100A4P26447 101 aaKnown RBP2.1□□□□□ -2.07
LINC00393-201ENST00000443621 CKS2P33552 79 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 CAMPP49913 170 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 ZNF80P51504 273 aaPredicted RBP2.1□□□□□ -2.07
LINC00393-201ENST00000443621 CRYBA4P53673 196 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 RAB4BP61018 213 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 TWIST1Q15672 202 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 ORMDL2Q53FV1 153 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 KHDC1LQ5JSQ8 128 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 C9orf66Q5T8R8 295 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 MRPL54Q6P161 138 aaKnown RBP2.1□□□□□ -2.07
LINC00393-201ENST00000443621 ADAMTSL5Q6ZMM2 481 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 ZFP2Q6ZN57 461 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 TMEM61Q8N0U2 210 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 RNF182Q8N6D2 247 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 OR10AG1Q8NH19 301 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 DYNLRB2Q8TF09 96 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 PGLYRP4Q96LB8 373 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 C20orf173Q96LM9 149 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 C9orf85Q96MD7 179 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 AP1S3Q96PC3 154 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 C12orf57Q99622 126 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 CITED1Q99966 193 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 VCX2Q9H322 139 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 MAP1LC3AQ9H492 121 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 RPH3ALQ9UNE2 315 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 PHLDA3Q9Y5J5 127 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 POLQO75417 2590 aa2.1□□□□□ -2.07
LINC00393-201ENST00000443621 HIVEP2P31629 2446 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 KIR2DL5BA0A0G2JN68 375 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 KIR2DL5BA0A0G2JPC4 375 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 TRBV10-1A0A0K0K1A3 114 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 A8MZ25 164 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 TSTD3H0UI37 97 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 ZNF207O43670 478 aaKnown RBP2.09□□□□□ -2.07
LINC00393-201ENST00000443621 SERF1AO75920 110 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 ATP5LO75964 103 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 LEPROTL1O95214 131 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 INSP01308 110 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 SMIM17P0DL12 118 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 CD28P10747 220 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 RNASE3P12724 160 aaKnown RBP2.09□□□□□ -2.07
LINC00393-201ENST00000443621 FABP4P15090 132 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 HLA-DMBP28068 263 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 AMTP48728 403 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 SLURP1P55000 103 aa2.09□□□□□ -2.07
LINC00393-201ENST00000443621 TCL1AP56279 114 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms