RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 C20orf166-AS1Q96NR2 134 aa2.7□□□□□ -1.98
VPS50-206ENST00000443443 SPHKAPQ2M3C7 1700 aa2.7□□□□□ -1.98
VPS50-206ENST00000443443 PLA2R1Q13018 1463 aa2.7□□□□□ -1.98
VPS50-206ENST00000443443 PCM1Q15154 2024 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 SCN8AQ9UQD0 1980 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 A6NIN4 97 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 F8W1H4 67 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 K7EP34 96 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 INSL4Q14641 139 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 SPRNQ5BIV9 151 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 FAM74A1Q5RGS3 127 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 S100A7L2Q5SY68 101 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 C2orf82Q6UX34 121 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 TMEM136Q6ZRR5 245 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 C10orf82Q8WW14 230 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 TMEM141Q96I45 108 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 ANAPC1Q9H1A4 1944 aa2.69□□□□□ -1.98
VPS50-206ENST00000443443 C10orf71Q711Q0 1435 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 IGKV2-28A0A075B6P5 120 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 A0A087WSZ3 146 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 TRAV10A0A0B4J240 114 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 TRAV40A0A0B4J280 105 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 TCRBV4S1A1TA0A5B7 111 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 CYB5AP00167 134 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 IGKV2D-28P01615 120 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 SSR2P43308 183 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 RBM3P98179 157 aaKnown RBP2.68□□□□□ -1.98
VPS50-206ENST00000443443 ZNF720Q7Z2F6 126 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 C15orf53Q8NAA6 179 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 PMCHL2Q9BQD1 86 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 NDUFB11Q9NX14 153 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 NDUFA12Q9UI09 145 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 CCDC88AQ3V6T2 1871 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 ZNF407Q9C0G0 2248 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 SCN1AP35498 2009 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 AKAP11Q9UKA4 1901 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 WNK3Q9BYP7 1800 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 DAPK1P53355 1430 aa2.68□□□□□ -1.98
VPS50-206ENST00000443443 CPSF1Q10570 1443 aaKnown RBP2.68□□□□□ -1.98
VPS50-206ENST00000443443 CCDC141Q6ZP82 1450 aa2.67□□□□□ -1.98
VPS50-206ENST00000443443 MAGI2Q86UL8 1455 aa2.67□□□□□ -1.98
VPS50-206ENST00000443443 PLXNB1O43157 2135 aa2.67□□□□□ -1.98
VPS50-206ENST00000443443 ASAH2BP0C7U1 165 aa2.67□□□□□ -1.98
VPS50-206ENST00000443443 KRTDAPP60985 99 aa2.67□□□□□ -1.98
VPS50-206ENST00000443443 COMMD6Q7Z4G1 85 aa2.67□□□□□ -1.98
VPS50-206ENST00000443443 MYH13Q9UKX3 1938 aa2.67□□□□□ -1.98
VPS50-206ENST00000443443 NYNRINQ9P2P1 1898 aaKnown RBP2.67□□□□□ -1.98
VPS50-206ENST00000443443 DNMBPQ6XZF7 1577 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 PTPRSQ13332 1948 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 WDR90Q96KV7 1748 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 TMSB15BA0A087X1C1 80 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 TRAV17A0A0B4J275 112 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 ATOX1O00244 68 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 TRAPPC2P0DI81 140 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 TRAPPC2BP0DI82 140 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 CXCL8P10145 99 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 CBLN1P23435 193 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 ZNF791Q3KP31 576 aaPredicted RBP2.66□□□□□ -1.98
VPS50-206ENST00000443443 UNQ5815/PRO19632Q6UWF5 114 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 ZNF431Q8TF32 576 aaPredicted RBP2.66□□□□□ -1.98
VPS50-206ENST00000443443 PTPRBP23467 1997 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 SCN9AQ15858 1988 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 ABCC5O15440 1437 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 ALPK3Q96L96 1907 aa2.66□□□□□ -1.98
VPS50-206ENST00000443443 PXDNLA1KZ92 1463 aa2.65□□□□□ -1.98
VPS50-206ENST00000443443 CC2D2AQ9P2K1 1620 aa2.65□□□□□ -1.98
VPS50-206ENST00000443443 IGLV2-18A0A075B6J9 118 aa2.65□□□□□ -1.99
VPS50-206ENST00000443443 RHOHQ15669 191 aa2.65□□□□□ -1.99
VPS50-206ENST00000443443 DEFB113Q30KQ7 82 aa2.65□□□□□ -1.99
VPS50-206ENST00000443443 SLC48A1Q6P1K1 146 aa2.65□□□□□ -1.99
VPS50-206ENST00000443443 MYOZ3Q8TDC0 251 aa2.65□□□□□ -1.99
VPS50-206ENST00000443443 LINC00052Q96N35 136 aa2.65□□□□□ -1.99
VPS50-206ENST00000443443 MGST2Q99735 147 aa2.65□□□□□ -1.99
VPS50-206ENST00000443443 UQCR10Q9UDW1 63 aa2.65□□□□□ -1.99
VPS50-206ENST00000443443 R4GN34 69 aa2.65□□□□□ -1.99
VPS50-206ENST00000443443 SCAPERQ9BY12 1400 aa2.65□□□□□ -1.99
VPS50-206ENST00000443443 NUP214P35658 2090 aaPredicted RBP2.65□□□□□ -1.99
VPS50-206ENST00000443443 CITO14578 2027 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 GREB1Q4ZG55 1949 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 USP54Q70EL1 1684 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 IGKV3D-11A0A0A0MRZ8 115 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 TRAV12-1A0A0B4J245 112 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 ODF3BA8MYP8 253 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 IBA57-AS1B1ANH7 110 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 IGKCP01834 107 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 NMBP08949 121 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 SLC25A6P12236 298 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 UBE2G1P62253 170 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 LY6EQ16553 131 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 ALKAL2Q6UX46 152 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 CLECL1Q8IZS7 167 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 PPDPFLQ8WWR9 84 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 S100A16Q96FQ6 103 aaKnown RBP2.64□□□□□ -1.99
VPS50-206ENST00000443443 MRPL35Q9NZE8 188 aaKnown RBP2.64□□□□□ -1.99
VPS50-206ENST00000443443 PSORS1C2Q9UIG4 136 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 CASKIN1Q8WXD9 1431 aa2.64□□□□□ -1.99
VPS50-206ENST00000443443 TANC2Q9HCD6 1990 aa2.63□□□□□ -1.99
VPS50-206ENST00000443443 hADV29S1A0JD25 119 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms