RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 A0A1W2PPV4 95 aa7.87□□□□□ -1.15
UBE2D4-204ENST00000440899 GNRH2O43555 120 aa7.87□□□□□ -1.15
UBE2D4-204ENST00000440899 SSNA1O43805 119 aa7.87□□□□□ -1.15
UBE2D4-204ENST00000440899 XGP55808 180 aa7.87□□□□□ -1.15
UBE2D4-204ENST00000440899 IFITM3Q01628 133 aa7.87□□□□□ -1.15
UBE2D4-204ENST00000440899 ACOT6Q3I5F7 207 aaPredicted RBP7.87□□□□□ -1.15
UBE2D4-204ENST00000440899 GOLT1AQ6ZVE7 132 aa7.87□□□□□ -1.15
UBE2D4-204ENST00000440899 C10orf126Q8N4M7 172 aa7.87□□□□□ -1.15
UBE2D4-204ENST00000440899 SMIM3Q9BZL3 60 aa7.87□□□□□ -1.15
UBE2D4-204ENST00000440899 RPH3ALQ9UNE2 315 aa7.87□□□□□ -1.15
UBE2D4-204ENST00000440899 HERC1Q15751 4861 aa7.87□□□□□ -1.15
UBE2D4-204ENST00000440899 EIF3GO75821 320 aaKnown RBP eCLIP7.86□□□□□ -1.15
UBE2D4-204ENST00000440899 CRYGDP07320 174 aa7.86□□□□□ -1.15
UBE2D4-204ENST00000440899 TIRAPP58753 221 aa7.86□□□□□ -1.15
UBE2D4-204ENST00000440899 KCNS1Q96KK3 526 aa7.86□□□□□ -1.15
UBE2D4-204ENST00000440899 TREM1Q9NP99 234 aa7.86□□□□□ -1.15
UBE2D4-204ENST00000440899 GATA1P15976 413 aaPredicted RBP7.85□□□□□ -1.15
UBE2D4-204ENST00000440899 KRTAP10-1P60331 282 aa7.85□□□□□ -1.15
UBE2D4-204ENST00000440899 NHLRC2Q8NBF2 726 aa7.85□□□□□ -1.15
UBE2D4-204ENST00000440899 TVP23CQ96ET8 276 aa7.85□□□□□ -1.15
UBE2D4-204ENST00000440899 WFDC1Q9HC57 220 aa7.85□□□□□ -1.15
UBE2D4-204ENST00000440899 SDF2L1Q9HCN8 221 aa7.85□□□□□ -1.15
UBE2D4-204ENST00000440899 BOLA1Q9Y3E2 137 aa7.85□□□□□ -1.15
UBE2D4-204ENST00000440899 VPS13BQ7Z7G8 4022 aa7.85□□□□□ -1.15
UBE2D4-204ENST00000440899 TRAV8-1A0A0A6YYK1 113 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 IGHV3-38A0A0C4DH36 116 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 LOC100131303A0A0U1RQF7 123 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 F6UZH7 168 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 PFDN1O60925 122 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 TYMSP04818 313 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 PFN1P07737 140 aaKnown RBP7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 DEFA1P59665 94 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 DEFA3P59666 94 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 RAB2AP61019 212 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 OR10G9Q8NGN4 311 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 OR10G7Q8NGN6 311 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 ASB13Q8WXK3 278 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 NDFIP1Q9BT67 221 aa7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 SRRM2Q9UQ35 2752 aaKnown RBP7.84□□□□□ -1.15
UBE2D4-204ENST00000440899 SERTM2A0A1B0GWG4 89 aa7.83□□□□□ -1.16
UBE2D4-204ENST00000440899 FBLL1A6NHQ2 334 aaKnown RBP7.83□□□□□ -1.16
UBE2D4-204ENST00000440899 CIDEAO60543 219 aa7.83□□□□□ -1.16
UBE2D4-204ENST00000440899 INAFM2P0DMQ5 153 aa7.83□□□□□ -1.16
UBE2D4-204ENST00000440899 GCSHP23434 173 aa7.83□□□□□ -1.16
UBE2D4-204ENST00000440899 PPT1P50897 306 aa7.83□□□□□ -1.16
UBE2D4-204ENST00000440899 ZNF876PQ49A33 203 aa7.83□□□□□ -1.16
UBE2D4-204ENST00000440899 FRZBQ92765 325 aa7.83□□□□□ -1.16
UBE2D4-204ENST00000440899 TRAV8-6A0A0B4J262 113 aa7.82□□□□□ -1.16
UBE2D4-204ENST00000440899 HMGB3O15347 200 aaKnown RBP7.82□□□□□ -1.16
UBE2D4-204ENST00000440899 PSCAO43653 123 aa7.82□□□□□ -1.16
UBE2D4-204ENST00000440899 GNG5P63218 68 aa7.82□□□□□ -1.16
UBE2D4-204ENST00000440899 LINC01556Q5JQF7 62 aa7.82□□□□□ -1.16
UBE2D4-204ENST00000440899 Q5VSD8 79 aa7.82□□□□□ -1.16
UBE2D4-204ENST00000440899 SLC25A29Q8N8R3 303 aa7.82□□□□□ -1.16
UBE2D4-204ENST00000440899 PRADC1Q9BSG0 188 aa7.82□□□□□ -1.16
UBE2D4-204ENST00000440899 TRBV6-4A0A1B0GX49 114 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 IBA57-AS1B1ANH7 110 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 K7EQM0 130 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 TAAR5O14804 337 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 RS1O15537 224 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 STAG3L2P0CL84 134 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 STAG3L3P0CL85 134 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 ARL14EPLP0DKL9 152 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 CDC34P49427 236 aaPredicted RBP7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 CFAP126Q5VTH2 177 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 C5orf17Q8NAS9 161 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 OR2G3Q8NGZ4 309 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 SGK494Q96LW2 274 aa7.81□□□□□ -1.16
UBE2D4-204ENST00000440899 MYCBP2O75592 4640 aa7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 LRCOL1A6NCL2 159 aa7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 TCRAP04437 139 aa7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 ZNF80P51504 273 aaPredicted RBP7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 RHOHQ15669 191 aa7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 OR10J3Q5JRS4 329 aa7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 DPPA3Q6W0C5 159 aa7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 SUN5Q8TC36 379 aa7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 NTN5Q8WTR8 489 aaPredicted RBP7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 RAB24Q969Q5 203 aa7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 PTH2Q96A98 100 aa7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 C11orf21Q9P2W6 132 aa7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 PSG8Q9UQ74 426 aa7.8□□□□□ -1.16
UBE2D4-204ENST00000440899 IGLV5-52A0A0A0MRZ9 124 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 GCGP01275 180 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 MBP02144 154 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 SMR3BP02814 79 aaPredicted RBP7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 GCHFRP30047 84 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 SUMO1P63165 101 aaKnown RBP7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 ZFP69Q49AA0 526 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 SMUG1Q53HV7 270 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 LELP1Q5T871 98 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 HSD17B11Q8NBQ5 300 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 C9orf85Q96MD7 179 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 PSMG3Q9BT73 122 aaPredicted RBP7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 TMEM70Q9BUB7 260 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 Q9HAA7 133 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 TMEM167BQ9NRX6 74 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 EPDR1Q9UM22 224 aa7.79□□□□□ -1.16
UBE2D4-204ENST00000440899 IGHV3-73A0A0B4J1V6 119 aa7.78□□□□□ -1.16
UBE2D4-204ENST00000440899 PGPEP1LA6NFU8 196 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms